mRNA_P-wetherbeei_contig7652.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7652.1.1
Unique NamemRNA_P-wetherbeei_contig7652.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Match: A0A835ZLF8_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLF8_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.500e-15
Identity = 61/130 (46.92%), Postives = 74/130 (56.92%), Query Frame = 1 
Query:  490 LAVGEAIEARFGGKSRWFPGTIESCSAAVGGAAAAAVTYAVAYADGDRESGIPRLRIRRPGEKEVRRLAAGMPVDVRLPRRGKGYHMATVRRADGADGSCLVAFADGDTEWGVVRDCIVG---PCSGNDG 870
            LAVG A+EARFGG++RWFPGT+ +  A   GA A      +AYADGDRE  +PR R+R PG+     L AG  VDV    R  G   A   R D  DG+  VAF DG+ +W V R   +G    C G DG
Sbjct:  172 LAVGMAVEARFGGRARWFPGTVTAVHA--DGACA------IAYADGDREERVPRRRVRLPGDAPAP-LRAGNAVDVV---RAGGRCAAGAVRRDNGDGTVYVAFKDGEVDWAVPRARALGRWAACGGGDG 289
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BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Match: A0A6H5K1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V4_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.830e-15
Identity = 49/109 (44.95%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:  502 EAIEARFGGKSRWFPGTIESCSAAVGGAAAAAVTYAVAYADGDRESGIPRLRIRRPGEKEVRRLAAGMPVDVRLPRRGKGYHMATVRRADGADGSCLVAFADGDTEWGV 828
            +A+EARFGG+S+WFPG +        G     + Y V + DGD E G+   R+RRPG++    L+AG+ VD++L R+GKGYH AT+ R +  DGS  V   DGD+EW +
Sbjct:   53 DAVEARFGGRSKWFPGKVRRAYEGREGR----LLYDVDFDDGDEEEGVLAGRVRRPGQRPPS-LSAGLVVDIKLARKGKGYHPATIGRVND-DGSLYVKLDDGDSEWSL 155
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BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Match: D7FWC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC4_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 6.590e-14
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 1 
Query:  502 EAIEARFGGKSRWFPGTIESCSAAVGGAAAAAVTYAVAYADGDRESGIPRLRIRRPGEKEVRRLAAGMPVDVRLPRRGKGYHMATVRRADGADGSCLVAFADGDTEWGV 828
            + +EARFGG+S+WFPG +        G     + Y V + DGD E G+   R+RRPG+     L AG+ VDV+L R+GKGYH  T+ R +  DGS  V   DGD+EW +
Sbjct:   53 DTVEARFGGRSKWFPGKVRRAYEGREGR----LLYDVDFDDGDEEEGVLAGRVRRPGQGPPA-LRAGLVVDVKLARKGKGYHPGTIGRVND-DGSLYVKLDDGDSEWSL 155
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BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Match: A0A7S2D1G6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1G6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.460e-6
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 1 
Query:  601 TYAVAYADGDRESGIPRLRIRRPGEKEVRRLAAGMPVDVRLPRRGKGYHM--ATVRRADGADGSCLVAFADGDTEWGVVRDCI 843
            TY +AYADGD+E G+ RLRI+RPG++  + L AGM  + R    G G       + +A+ +DG+  V + DGD E GV  + I
Sbjct:   21 TYNIAYADGDQEEGVKRLRIKRPGDQNPKALIAGMRCEAR---HGGGMQCFDGVISQAN-SDGTFDVDYDDGDREQGVPAELI 99
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BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Match: A0A8J2SMW5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMW5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.470e-5
Identity = 46/131 (35.11%), Postives = 61/131 (46.56%), Query Frame = 1 
Query:  472 APFGGELAVGEAIEARFGGKSRWFPGTIESCSAAVGGAAAAAVTYAVAYADGDRESGIPRLRIRRPGEKEVR-------RLAAGMPVDVRLPRRGKGYHMATVRRADGADGSCLVAFADGDTEWGVVRDCI 843
            AP  G  AVG  +E R+ GK R++PGTI      V         YA+ Y DG++ESG+    IR   E           + A G  V+ R  R  K ++   V +ADG   S  V + DGD E GV  + I
Sbjct:  474 APAAGAFAVGAKVECRYKGKKRYYPGTIADYEDGV---------YAIDYDDGEKESGVSEELIRAVEEAPAPAPAAASGKYAVGAKVEARY-RGKKKWYAGEVTKADGDVYS--VTYEDGDVEDGVAEELI 592
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BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Match: D8LIJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ6_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 4.160e-5
Identity = 40/121 (33.06%), Postives = 57/121 (47.11%), Query Frame = 1 
Query:  481 GGELAVGEAIEARFGGKSRWFPGTIESC-------------SAAVGGAA---------AAAVTYAVAYADGDRESGIPRLRIRRPGEKEVRRLAAGMPVDVRLPRRGKGYHMATVRRADGA 777
            G  L VG+ +EAR+GGKS WFPGT+                    GG           +   + A+ Y DGD E  +PR+R+R  G+K+ R L  G  VDV+     +G  + + RR + A
Sbjct: 2290 GAGLTVGDRVEARYGGKSEWFPGTVREIHDVDDAHTPASTRDVVAGGGGNXXXNSGLKSKLCSVAIDYDDGDTEERVPRVRVRLVGQKQPRFLNEGDEVDVK-----RGKKIRSTRRLNSA 2405
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BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Match: A0A7S2DZB5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZB5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 8.300e-5
Identity = 38/125 (30.40%), Postives = 64/125 (51.20%), Query Frame = 1 
Query:  484 GELAVGEAIEARFGGKSRWFPGTIESCSAAVGGAAAAAVTYAVAYADGDRESGIPRLRIRR-----PGEKEVRRLAAGMPVDVRLPRRGKGYHMATVRRADGADGSCLVAFADGDTEWGVVRDCI 843
            G LA G  +EAR+ GKS+++PG+I+  +           T+ + Y DG++E G+    I+             RLA G  V+ R   + K Y+  +++R +  DG+  + + DG+ E+GV  D I
Sbjct:   16 GRLAEGTKVEARYKGKSKYYPGSIKRVNRDG--------TFDIDYDDGEQEFGVEEDLIKAVDGXXXXXXXXGRLAEGTKVEARYKGKSK-YYPGSIKRVN-RDGTFDIDYDDGEQEFGVEEDLI 130
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7652.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835ZLF8_9STRA1.500e-1546.92Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5K1V4_9PHAE1.830e-1544.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWC4_ECTSI6.590e-1444.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2D1G6_9STRA3.460e-642.17Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A8J2SMW5_9STRA1.470e-535.11Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
D8LIJ6_ECTSI4.160e-533.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2DZB5_9STRA8.300e-530.40Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7652contigP-wetherbeei_contig7652:936..2775 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009037056.1
PFAMsAsp_Arg_Hydrox
Model size1841
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.05e-06
EggNOG OGsCOG3555@1|root,KOG3696@2759|Eukaryota
Descriptionpeptide-aspartate beta-dioxygenase activity
Cds size1839
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186993.4393108-CDS-P-wetherbeei_contig7652:936..27751683186993.4393108-CDS-P-wetherbeei_contig7652:936..2775Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7652 937..2775 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7652.1.1prot_P-wetherbeei_contig7652.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7652 937..2775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7652.1.1

>prot_P-wetherbeei_contig7652.1.1 ID=prot_P-wetherbeei_contig7652.1.1|Name=mRNA_P-wetherbeei_contig7652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=613bp
DQDDAGDKGVSRASSRRRDRPATDHPRRGASPPISRGTESFTAARAFFTA
SVEVTEPDSGFATGAGNAKKGAAAVAAANGDDGDGFADMDRELAADGDDD
GKASCGIRPRGRATTESRLLRGTGTDASRATASAAGASEAGANGVGIAAA
AAAAAAAAPFGGELAVGEAIEARFGGKSRWFPGTIESCSAAVGGAAAAAV
TYAVAYADGDRESGIPRLRIRRPGEKEVRRLAAGMPVDVRLPRRGKGYHM
ATVRRADGADGSCLVAFADGDTEWGVVRDCIVGPCSGNDGSGGVSGSGGG
RSGAESGGAAKVEGDEGRGNDERADAVAGARGAAVEAAAATAAGAADGDM
IAPARTNGSSGASTAALSSASAEASLAAGKALAGKGVMAAAVPAIQWDGA
AAAVPAGIDWIQSIAKAVPSPVATPRIEEQQTVPATANNAVTTGAVADIG
ASDARHGSLGPPPAFLASAVLSGLITPPPRPASPAAALFAGPVAASRTSS
VDYVKLASTLEREHLAAEAETAARTETGNGNGGTVAGDGSGRSASCSGKG
DIEIQKTDGASNEAPAPAVPVATEKELAAVALSAAPPASATTTAAAADTT
MKPLPPARAMAEP
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mRNA from alignment at P-wetherbeei_contig7652:936..2775-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7652.1.1 ID=mRNA_P-wetherbeei_contig7652.1.1|Name=mRNA_P-wetherbeei_contig7652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1840bp|location=Sequence derived from alignment at P-wetherbeei_contig7652:936..2775- (Phaeothamnion wetherbeei SAG_119_79)
GATCAGGACGACGCCGGCGACAAGGGCGTGTCACGCGCCTCTTCGCGTCG
TCGGGACCGGCCGGCCACGGACCACCCACGGCGGGGAGCGAGCCCTCCTA
TTTCTCGCGGGACGGAGTCCTTCACGGCTGCGCGCGCCTTCTTTACCGCA
TCGGTCGAAGTCACCGAGCCCGACAGCGGGTTTGCCACCGGCGCCGGCAA
TGCCAAAAAAGGCGCCGCCGCCGTCGCTGCCGCCAACGGAGACGATGGCG
ACGGGTTTGCCGACATGGATCGGGAGCTCGCTGCCGATGGCGACGACGAT
GGGAAGGCCAGCTGCGGCATCCGGCCGCGAGGCCGCGCCACCACGGAGTC
ACGGCTACTACGTGGCACCGGAACCGACGCATCACGTGCTACCGCGTCTG
CTGCCGGAGCATCTGAGGCTGGCGCCAACGGCGTTGGCATCGCGGCGGCG
GCGGCGGCAGCGGCGGCGGCGGCACCGTTCGGTGGAGAGCTGGCGGTGGG
GGAGGCTATCGAGGCGCGCTTCGGCGGCAAATCGCGCTGGTTTCCCGGCA
CGATCGAGTCGTGCTCAGCAGCGGTCGGCGGCGCCGCTGCCGCCGCCGTG
ACGTACGCCGTCGCCTACGCGGACGGCGACCGCGAATCTGGCATCCCGCG
ACTGCGCATTCGCCGCCCGGGCGAGAAGGAGGTGCGTCGGCTGGCGGCCG
GGATGCCCGTGGATGTCCGGCTGCCGCGGCGGGGCAAAGGTTACCATATG
GCAACGGTGCGGCGCGCGGACGGCGCGGACGGCAGCTGCCTCGTGGCGTT
CGCCGACGGCGACACCGAGTGGGGCGTCGTGCGGGACTGCATCGTCGGGC
CTTGCAGTGGCAACGACGGTAGCGGCGGCGTCAGCGGCAGTGGTGGCGGC
AGAAGTGGCGCGGAATCTGGTGGTGCGGCTAAAGTTGAGGGCGACGAGGG
AAGGGGCAACGACGAGCGTGCAGACGCCGTCGCTGGCGCCCGGGGCGCGG
CAGTCGAAGCGGCGGCTGCAACGGCCGCCGGTGCTGCCGATGGTGACATG
ATCGCTCCTGCGCGCACCAACGGATCGTCGGGAGCTAGTACGGCAGCTCT
CTCATCCGCCTCTGCCGAAGCATCTTTGGCGGCAGGGAAAGCACTGGCGG
GCAAAGGTGTCATGGCGGCTGCGGTGCCCGCAATTCAATGGGATGGGGCA
GCAGCAGCGGTCCCGGCGGGCATTGACTGGATCCAGAGCATCGCAAAGGC
CGTGCCGTCCCCGGTGGCGACTCCGAGGATCGAAGAGCAGCAGACAGTGC
CGGCCACGGCAAACAACGCAGTGACGACGGGGGCGGTGGCGGACATCGGT
GCCTCTGACGCCCGCCACGGCTCGCTGGGGCCGCCGCCAGCATTTCTGGC
CTCTGCAGTCTTGAGCGGTCTGATCACGCCGCCGCCGAGGCCAGCATCGC
CGGCGGCGGCGCTCTTCGCCGGGCCTGTGGCGGCATCGCGCACCTCATCG
GTGGACTACGTCAAGCTGGCGAGCACCCTCGAGCGCGAGCACCTCGCGGC
GGAGGCGGAAACCGCCGCAAGGACAGAGACTGGTAATGGCAATGGCGGCA
CTGTCGCGGGAGACGGCAGTGGCAGGAGTGCTAGCTGCAGCGGCAAGGGT
GACATCGAAATCCAGAAGACAGATGGTGCCTCTAACGAGGCGCCAGCGCC
TGCGGTGCCCGTTGCTACCGAAAAAGAGCTCGCGGCGGTAGCTTTATCGG
CAGCGCCGCCTGCTTCAGCAACGACAACGGCGGCTGCAGCGGACACGACA
ATGAAACCGCTGCCTCCTGCGCGAGCGATGGCAGAGCCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7652:936..2775-

>mRNA_P-wetherbeei_contig7652.1.1 ID=mRNA_P-wetherbeei_contig7652.1.1|Name=mRNA_P-wetherbeei_contig7652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1839bp|location=Sequence derived from alignment at P-wetherbeei_contig7652:936..2775- (Phaeothamnion wetherbeei SAG_119_79)
GATCAGGACGACGCCGGCGACAAGGGCGTGTCACGCGCCTCTTCGCGTCG
TCGGGACCGGCCGGCCACGGACCACCCACGGCGGGGAGCGAGCCCTCCTA
TTTCTCGCGGGACGGAGTCCTTCACGGCTGCGCGCGCCTTCTTTACCGCA
TCGGTCGAAGTCACCGAGCCCGACAGCGGGTTTGCCACCGGCGCCGGCAA
TGCCAAAAAAGGCGCCGCCGCCGTCGCTGCCGCCAACGGAGACGATGGCG
ACGGGTTTGCCGACATGGATCGGGAGCTCGCTGCCGATGGCGACGACGAT
GGGAAGGCCAGCTGCGGCATCCGGCCGCGAGGCCGCGCCACCACGGAGTC
ACGGCTACTACGTGGCACCGGAACCGACGCATCACGTGCTACCGCGTCTG
CTGCCGGAGCATCTGAGGCTGGCGCCAACGGCGTTGGCATCGCGGCGGCG
GCGGCGGCAGCGGCGGCGGCGGCACCGTTCGGTGGAGAGCTGGCGGTGGG
GGAGGCTATCGAGGCGCGCTTCGGCGGCAAATCGCGCTGGTTTCCCGGCA
CGATCGAGTCGTGCTCAGCAGCGGTCGGCGGCGCCGCTGCCGCCGCCGTG
ACGTACGCCGTCGCCTACGCGGACGGCGACCGCGAATCTGGCATCCCGCG
ACTGCGCATTCGCCGCCCGGGCGAGAAGGAGGTGCGTCGGCTGGCGGCCG
GGATGCCCGTGGATGTCCGGCTGCCGCGGCGGGGCAAAGGTTACCATATG
GCAACGGTGCGGCGCGCGGACGGCGCGGACGGCAGCTGCCTCGTGGCGTT
CGCCGACGGCGACACCGAGTGGGGCGTCGTGCGGGACTGCATCGTCGGGC
CTTGCAGTGGCAACGACGGTAGCGGCGGCGTCAGCGGCAGTGGTGGCGGC
AGAAGTGGCGCGGAATCTGGTGGTGCGGCTAAAGTTGAGGGCGACGAGGG
AAGGGGCAACGACGAGCGTGCAGACGCCGTCGCTGGCGCCCGGGGCGCGG
CAGTCGAAGCGGCGGCTGCAACGGCCGCCGGTGCTGCCGATGGTGACATG
ATCGCTCCTGCGCGCACCAACGGATCGTCGGGAGCTAGTACGGCAGCTCT
CTCATCCGCCTCTGCCGAAGCATCTTTGGCGGCAGGGAAAGCACTGGCGG
GCAAAGGTGTCATGGCGGCTGCGGTGCCCGCAATTCAATGGGATGGGGCA
GCAGCAGCGGTCCCGGCGGGCATTGACTGGATCCAGAGCATCGCAAAGGC
CGTGCCGTCCCCGGTGGCGACTCCGAGGATCGAAGAGCAGCAGACAGTGC
CGGCCACGGCAAACAACGCAGTGACGACGGGGGCGGTGGCGGACATCGGT
GCCTCTGACGCCCGCCACGGCTCGCTGGGGCCGCCGCCAGCATTTCTGGC
CTCTGCAGTCTTGAGCGGTCTGATCACGCCGCCGCCGAGGCCAGCATCGC
CGGCGGCGGCGCTCTTCGCCGGGCCTGTGGCGGCATCGCGCACCTCATCG
GTGGACTACGTCAAGCTGGCGAGCACCCTCGAGCGCGAGCACCTCGCGGC
GGAGGCGGAAACCGCCGCAAGGACAGAGACTGGTAATGGCAATGGCGGCA
CTGTCGCGGGAGACGGCAGTGGCAGGAGTGCTAGCTGCAGCGGCAAGGGT
GACATCGAAATCCAGAAGACAGATGGTGCCTCTAACGAGGCGCCAGCGCC
TGCGGTGCCCGTTGCTACCGAAAAAGAGCTCGCGGCGGTAGCTTTATCGG
CAGCGCCGCCTGCTTCAGCAACGACAACGGCGGCTGCAGCGGACACGACA
ATGAAACCGCTGCCTCCTGCGCGAGCGATGGCAGAGCCG
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