mRNA_P-wetherbeei_contig762.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: A0A835YRI7_9STRA (Chlorophyll synthase, putative chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI7_9STRA) HSP 1 Score: 381 bits (978), Expect = 1.090e-123 Identity = 195/275 (70.91%), Postives = 213/275 (77.45%), Query Frame = 1
Query: 739 ASTGNYHTWNPFGGD---VSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVWVS 1554
A++GNYHTWNP + VS DA DLAKALVCMVLAGPFLTGYTQTINDWYDR+IDAINEPYRPIPSG I+EG+V AQI LL GGL LAYGLD WAGHD P IL LS FGSFISYIYSAPPLKLKQNGW+GNYALGSSYISLP W G+ A + + VV+LTLLYSWAGLGIAIVNDFKSVEGDRE+GLQSLPVAFG ETAKWICVASID+TQLGIAAWL+SVGEPTY A+LTAL+LPQ++
Sbjct: 124 AASGNYHTWNPLAAEGTAVSGADALGDLAKALVCMVLAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGKITEGQVKAQIAFLLGGGLALAYGLDLWAGHDTPTILLLSIFGSFISYIYSAPPLKLKQNGWLGNYALGSSYISLP---------------------------WWCGQ--AMFGELNIQVVVLTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDLTQLGIAAWLYSVGEPTYAAVLTALVLPQIYAQ 369
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: D7G581_ECTSI (Chlorophyll synthase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G581_ECTSI) HSP 1 Score: 380 bits (975), Expect = 3.990e-123 Identity = 190/273 (69.60%), Postives = 210/273 (76.92%), Query Frame = 1
Query: 739 ASTGNYHTWNPFGG-DVSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVWVS 1554
A++GNYH WNPFGG DVS DL KAL CM+L+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIW LLLGGL +AYGLD WAGHDFP++ ALS GSFISYIYSAPP+KLKQNGW+GNYALGSSYISLP W G+ A + + VVILTLLYSWAGLGIAIVNDFKSVEGDRE+GLQSLPVAFG E AKW+CV SID TQLGIAAWL+ +GEPTY AILTAL+LPQV+
Sbjct: 135 AASGNYHWWNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLP---------------------------WWCGQ--AMFGELNIQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQ 378
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: D7P7W3_ELYCH (Chlorophyll synthase subunit G (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=D7P7W3_ELYCH) HSP 1 Score: 360 bits (923), Expect = 1.510e-117 Identity = 181/268 (67.54%), Postives = 201/268 (75.00%), Query Frame = 1
Query: 757 HTWNPFGGD--VSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVWVS 1554
HTWNPF G V L DAG DLAKAL CM+LAGPFLTG+TQTINDWYDR+IDAINEPYRPIPSGAISEG+V AQI LL+GGL L+YGLD WAGH P + LS FG+FISYIYSAPPLKLKQNGW GN+ALGSSYISLP W G+ A + L VV+LTLLYSWAGLGIAIVNDFKSVEGDR +GLQSLPVAFG E AKWICV+SID+TQLGIAAWL+ +GEPTY +L LILPQ++
Sbjct: 1 HTWNPFAGPDAVDLQDAGIDLAKALTCMILAGPFLTGFTQTINDWYDRDIDAINEPYRPIPSGAISEGQVKAQIAFLLVGGLALSYGLDLWAGHQMPTVFLLSLFGTFISYIYSAPPLKLKQNGWAGNFALGSSYISLP---------------------------WWCGQ--AMFGELNLQVVVLTLLYSWAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGIEKAKWICVSSIDITQLGIAAWLYYIGEPTYAFVLLGLILPQIYAQ 239
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: A0A7S1XSB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSB6_9STRA) HSP 1 Score: 350 bits (897), Expect = 2.840e-111 Identity = 180/270 (66.67%), Postives = 196/270 (72.59%), Query Frame = 1
Query: 739 ASTGNYHTWNPFGGDVSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVW 1548
A++GNYHTWNPF V + D KA VCM+L+GPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVI QIW LLLGGLGLA LD WAGH+ P + LS FGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLP W G+ A + V ILTLLYSWAGLGIAIVNDFKSVEGDR +GLQSLPVAFG + AKWICVASID TQ +AA+L G+ Y A LTALILPQ++
Sbjct: 146 AASGNYHTWNPFDATVDVSACTEDALKAFVCMILSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIFQIWFLLLGGLGLAGALDLWAGHETPTVFLLSLFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLP---------------------------WWCGQ--AMFGELNWQVCILTLLYSWAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGVDKAKWICVASIDATQAAVAAYLAYNGQYGYAAALTALILPQMY 386
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: K0RLR8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RLR8_THAOC) HSP 1 Score: 343 bits (881), Expect = 4.340e-109 Identity = 182/274 (66.42%), Postives = 201/274 (73.36%), Query Frame = 1
Query: 739 ASTGNYH-TWNPFGG---DVSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVW 1548
A++GNYH WNPF DV LG D AK V M+LAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEG+VIAQIW LLLGGLG+AYGLDAWAGHD P +L LS FGSFISYIYSAPPLKLKQNGW GNYALG SYISLP W G+ F + R + IL +LYS AGLGIAIVNDFKSVEGDR+LGLQSLPVAFG +TAKWIC S+ VTQLG+AA+L S+ E TY AIL L+LPQ++
Sbjct: 128 AASGNYHWIWNPFDPNDRDVMLGLE--DTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIAQIWFLLLGGLGIAYGLDAWAGHDVPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGCSYISLP---------------------------WWCGQAV-FGELDRPVYFILPILYSIAGLGIAIVNDFKSVEGDRQLGLQSLPVAFGIDTAKWICAGSVTVTQLGVAAYLQSINETTYAAILMGLLLPQIY 371
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: A0A7S1ZAA9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAA9_TRICV) HSP 1 Score: 340 bits (871), Expect = 2.420e-108 Identity = 177/274 (64.60%), Postives = 202/274 (73.72%), Query Frame = 1
Query: 739 ASTGNYH-TWNPFGG---DVSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVW 1548
A++GNYH WNPF DV LG D K V M+LAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIW+LLLGGLG+AYGLD WAGH+FP +LALS FGSFISYIYSAPPLKLKQNGW GN+ALG+SYISLP W G+ F + + + IL +LYS AGLGIAIVNDFKS+EGDR LGL SLPVAFG + AK+IC S+ +TQLG+A +L+S+ EPTY AIL ALILPQ++
Sbjct: 75 AASGNYHWMWNPFDPNDRDVLLG--AEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHEFPTVLALSVFGSFISYIYSAPPLKLKQNGWAGNFALGASYISLP---------------------------WWCGQAV-FGELDKPVYWILPILYSIAGLGIAIVNDFKSIEGDRALGLNSLPVAFGIDGAKYICAGSVTLTQLGVAGYLYSINEPTYAAILLALILPQIY 318
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: L1IGQ0_GUITC (Chl synthetase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IGQ0_GUITC) HSP 1 Score: 341 bits (875), Expect = 2.560e-108 Identity = 176/277 (63.54%), Postives = 199/277 (71.84%), Query Frame = 1
Query: 739 ASTGNYHT-WNPFGGDVSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVWVSLCAF 1566
A++G YH+ W+ S + D KALVCMVLAGP LTGYTQTINDWYDREIDAINEP RPIPSGAISE EVIAQIW LLLGGLGLAYGLD WAGH++P +LAL+ GSFISYIYSAPPLKLKQ+GWIGNYALGSSYI+LP W G+V + V ILT+LYSWAGLGIAIVNDFKS+EGDRELGLQSLPV FG +TAKWICV SID TQLG+A +L S+GE Y +L LILPQ+++ F
Sbjct: 124 AASGKYHSIWD----GASFSEWSTDFVKALVCMVLAGPLLTGYTQTINDWYDREIDAINEPNRPIPSGAISENEVIAQIWALLLGGLGLAYGLDVWAGHEWPSVLALAIGGSFISYIYSAPPLKLKQSGWIGNYALGSSYIALP---------------------------WWCGQVFFNQASFNPTVAILTILYSWAGLGIAIVNDFKSIEGDRELGLQSLPVQFGVDTAKWICVGSIDFTQLGVAGYLASIGETNYALVLLGLILPQIYLQFTTF 369
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: A0A7S0CSL5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSL5_9EUKA) HSP 1 Score: 344 bits (882), Expect = 1.130e-107 Identity = 177/273 (64.84%), Postives = 205/273 (75.09%), Query Frame = 1
Query: 739 ASTGNYHT-WNPFGGDVSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVWVS 1554
A++GNYH+ W+ +V L D G K+L CM+LAGP LTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIW LLLGGLGLAYGLD WAGHDFP++ ALS GSF+SYIYSAPPLKLKQ+GW GNYALGSSYI+LP W G+ A + V++L+LLYS AGLGIAIVNDFKS+EGDR+LGLQSLPVAFG +TAKWIC SID+TQLG+AA+L+S+GE TY IL LILPQ+++
Sbjct: 253 AASGNYHSIWSGAPLEVCLEDVG----KSLGCMLLAGPLLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWALLLGGLGLAYGLDQWAGHDFPMVTALSIGGSFVSYIYSAPPLKLKQSGWAGNYALGSSYIALP---------------------------WWCGQ--AMFGTLNAPVIVLSLLYSIAGLGIAIVNDFKSIEGDRQLGLQSLPVAFGVDTAKWICAGSIDITQLGVAAYLYSIGETTYANILMGLILPQMFLQ 492
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: A0A7S3V4Q0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4Q0_9STRA) HSP 1 Score: 341 bits (875), Expect = 2.040e-107 Identity = 178/274 (64.96%), Postives = 202/274 (73.72%), Query Frame = 1
Query: 739 ASTGNYH-TWNPFGG---DVSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVW 1548
A++GNYH WNPF DV LG D AK LV M+LAGPFLTG+TQTINDWYD+EIDAINEPYRPIPSGAISEGEVIAQIW+LLLGGLG++YGLD WAGHDFPV+ ALS FGSFISYIYSAPPLKLKQNGW GNYALG+SYISLP W G+ F + R + IL +LYS AGLGIAIVNDFKSVEGDR +GL SLPVAFG + AKWIC S+ +TQLG+A +L S+GE YGA + ALILPQ++
Sbjct: 183 AASGNYHWMWNPFDPNDRDVMLG--ATDAAKGLVAMILAGPFLTGFTQTINDWYDKEIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGISYGLDVWAGHDFPVVFALSVFGSFISYIYSAPPLKLKQNGWAGNYALGASYISLP---------------------------WWCGQAV-FGELDRPVFWILPILYSIAGLGIAIVNDFKSVEGDRAMGLNSLPVAFGIDGAKWICAGSVTLTQLGVAGYLASIGETAYGAGILALILPQIY 426
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Match: B8C067_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C067_THAPS) HSP 1 Score: 336 bits (861), Expect = 2.610e-106 Identity = 175/274 (63.87%), Postives = 202/274 (73.72%), Query Frame = 1
Query: 739 ASTGNYH-TWNPFGGD---VSLGDAGADLAKALVCMVLAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWVLLLGGLGLAYGLDAWAGHDFPVILALSAFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPVVFFSEAVLFLDNSRQNCMNRSKGEEILWRGRVTAFYSVRRLMVVILTLLYSWAGLGIAIVNDFKSVEGDRELGLQSLPVAFGTETAKWICVASIDVTQLGIAAWLFSVGEPTYGAILTALILPQVW 1548
A++GNYH WNPF + V LG D+AK V M+LAGPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISEG+VI QIW LLLGGLG+AYGLD WAGHDFP +LALS FGS++SYIYSAPPLKLKQNGW GNYALG SYISLP W G+ F + R + +L +LYS AGLGIAIVNDFKS+EGDRELGLQSLPVAFG + AK+IC S+ +TQLG+AA+L S+GE TY AIL L+LPQ++
Sbjct: 113 AASGNYHWIWNPFDPNDRNVMLGLE--DMAKGFVAMILAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLP---------------------------WWCGQAV-FGELDRPVYFVLPILYSIAGLGIAIVNDFKSIEGDRELGLQSLPVAFGVDGAKYICAGSVTLTQLGVAAYLQSIGETTYAAILLGLLLPQIY 356 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig762.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig762.1.1 >prot_P-wetherbeei_contig762.1.1 ID=prot_P-wetherbeei_contig762.1.1|Name=mRNA_P-wetherbeei_contig762.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=355bp MLSFTRPSRRASTGNYHTWNPFGGDVSLGDAGADLAKALVCMVLAGPFLTback to top mRNA from alignment at P-wetherbeei_contig762:2..2479- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig762.1.1 ID=mRNA_P-wetherbeei_contig762.1.1|Name=mRNA_P-wetherbeei_contig762.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2478bp|location=Sequence derived from alignment at P-wetherbeei_contig762:2..2479- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig762:2..2479- >mRNA_P-wetherbeei_contig762.1.1 ID=mRNA_P-wetherbeei_contig762.1.1|Name=mRNA_P-wetherbeei_contig762.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1065bp|location=Sequence derived from alignment at P-wetherbeei_contig762:2..2479- (Phaeothamnion wetherbeei SAG_119_79)back to top |