mRNA_P-wetherbeei_contig759.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig759.1.1
Unique NamemRNA_P-wetherbeei_contig759.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A353LR22_9PROT (Queuine tRNA-ribosyltransferase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LR22_9PROT)

HSP 1 Score: 653 bits (1685), Expect = 1.360e-227
Identity = 333/492 (67.68%), Postives = 383/492 (77.85%), Query Frame = 3 
Query:  717 DSADYQCGT*GWRARGRGWHDVAAPAGKRGGG*RNS*SLDGRNQYFYYAGIPVQNSRRHDHQFSFTEIDFVYAGVGFLRAGCDAGGLSTCYSHGIPVLFLRGRQFAVS-GATMTASSQ-----------------FSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFA 2138
            D    QC   G  A GRG H  AA +GK GG  R +  L GR++YF++AG+   + R  DHQFS    D VYAG GFLRA  DA  L  C   G+P+LFL G Q A S G  MT                     F F+  ARDGAAR+G+I TPRG+IRTPAFMPVGTAGTVKAMLPGTVR LGADI+LGNTYHLMLRP AERVARLGGLH FMNWPHPILTDSGGYQVMSLS+LR++ E+GVTFRSH+DG+ H LTPERS+++QLLLGSDI+MVLDECTPFPATH  AE S+ LSMRWA R KTAFA+APGHALFGIVQGG+YP+LR +SA  L +IGF GYA+GGLAVGEGQ++MF T++ T P LP D+PRYLMGVGKP+D++GAV+RG+DMFDCVLPTRSGRTGQAFTS+GVLN+RNA HAED  PLD ++DCPASRDYSRAYLHHLVKSKEILG+MLL+WHNLAYYQ+LM  +  AI AG L   A
Sbjct:    8 DGRGGQCRACGGPAGGRGRHHGAAASGKCGGPDRRACPLAGRDRYFHHAGLSFPHGRCADHQFSPAAFDLVYAGRGFLRATDDAWRLCACDCGGVPLLFLWGWQPAFSDGCNMTRGKDDQDQTTTEAEPAGRAGAFGFSCLARDGAARSGVITTPRGQIRTPAFMPVGTAGTVKAMLPGTVRALGADILLGNTYHLMLRPSAERVARLGGLHNFMNWPHPILTDSGGYQVMSLSELRQMSEEGVTFRSHVDGAKHHLTPERSVDIQLLLGSDIVMVLDECTPFPATHAVAESSLALSMRWAARCKTAFADAPGHALFGIVQGGVYPDLRARSAAQLQEIGFHGYAVGGLAVGEGQQAMFDTLDATVPHLPQDKPRYLMGVGKPADLLGAVMRGIDMFDCVLPTRSGRTGQAFTSQGVLNLRNARHAEDQSPLDPAIDCPASRDYSRAYLHHLVKSKEILGAMLLSWHNLAYYQHLMAEMRSAIAAGTLSALA 499
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A3C0TSZ7_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TSZ7_9PROT)

HSP 1 Score: 607 bits (1564), Expect = 2.000e-211
Identity = 296/366 (80.87%), Postives = 330/366 (90.16%), Query Frame = 3 
Query: 1062 SQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAP----GHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEF 2147
            ++F+FA+ ARDGAARTG+I+TPRGEIRTPAFMPVGTA TVKAMLPG+VRE GADIVLGNTYHLMLRPGAER+ARLGGLH+FMNWPHPILTDSGGYQVMSLS+LRK++E GVTFRSH+DGSAHLLTPERS+E+QL+LGSDI+MVLDECTP+PAT++QAE SM LSMRWA RSK AF  A     GHALFGIVQGG+YPELR  S KALCDIGF G AIGGLAVGEGQ++MF  ++ TTP LP D PRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLN+RNACHAED RPLD +L+C ASR+YSRAYLHHLVKSKEILG+MLLTWHNLAYYQ+LMR+L + I  G L EFA +F
Sbjct:    2 NKFTFALEARDGAARTGVIRTPRGEIRTPAFMPVGTAATVKAMLPGSVRETGADIVLGNTYHLMLRPGAERIARLGGLHRFMNWPHPILTDSGGYQVMSLSKLRKMEENGVTFRSHVDGSAHLLTPERSIEIQLMLGSDIVMVLDECTPYPATYDQAEASMQLSMRWALRSKDAFERAEAISRGHALFGIVQGGVYPELRASSVKALCDIGFQGLAIGGLAVGEGQDNMFRVLDCTTPLLPEDTPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNLRNACHAEDLRPLDETLNCEASRNYSRAYLHHLVKSKEILGAMLLTWHNLAYYQHLMRKLREVITEGRLREFAADF 367
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A7Y0DY22_9PROT (Queuine tRNA-ribosyltransferase n=2 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DY22_9PROT)

HSP 1 Score: 560 bits (1442), Expect = 8.170e-191
Identity = 290/494 (58.70%), Postives = 345/494 (69.84%), Query Frame = 3 
Query:  714 GDSADYQCGT*GWRARGRGWHDVAAPAGKRGGG*RNS*SLDGRNQYFYYAGIPVQNSRRHDHQFSFTEIDFVYAGVGFLRAGCDAGGLSTCYSHGIPVLFL--------RGR--------QFAVSGATMTASSQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEF 2147
            G+    +C +   RA  R  HD  A AGKRG   R    + GR+ Y ++  + +Q  R  D QF F E+D V+AG    RA  D GGL  C+ + + +LFL        RG         Q AV      + + FSF + A D  AR G + T  G + TPAFMPVGTAGTVKAMLPG+V + GA+IVLGNTYHLMLRPGAERVA LGGLH+FMNWP PILTDSGGYQVMSL+ LRKI E GV FRSH+DGS H LTPE SM++Q +L SDI M  DECTPFPA H  AEKSM +SMRWA RS+ AF N  G+ LFGIVQG +Y +LR +S +AL DIGF+GYA+GGLAVGEGQE MF+T++ TTP +P ++PRYLMGVGKP DIVGAV RG+DMFDCVLPTRSGR  QAFT  G +N++NA HA DSRPLD    CPA RDYSRAYLHHL K++E+LG MLL+WHN+AYYQ LM  + DAI  G   +F   F
Sbjct:    7 GNGTAAECPSRVRRAGRRRRHDRDADAGKRGSPDRQPARVRGRDGYLHHPRLSLQRRRSPDDQFPFAEVDPVHAGQRLCRAAPDEGGLFPCHRYRLSLLFLWRQQSAGPRGEFGMTPPDIQRAVFSDFEPSGADFSFKLIANDRQARRGRVTTAHGTVETPAFMPVGTAGTVKAMLPGSVAQTGAEIVLGNTYHLMLRPGAERVAELGGLHRFMNWPGPILTDSGGYQVMSLAALRKITEDGVRFRSHVDGSYHTLTPESSMDIQRMLDSDITMAFDECTPFPADHPTAEKSMEMSMRWAARSRDAFTNRKGYGLFGIVQGSVYEDLRHRSIQALTDIGFEGYAVGGLAVGEGQELMFSTLDFTTPAMPKEKPRYLMGVGKPDDIVGAVKRGIDMFDCVLPTRSGRNAQAFTRRGTVNLKNARHAADSRPLDEECPCPACRDYSRAYLHHLFKAQEMLGPMLLSWHNVAYYQQLMAGIRDAIEDGRFDDFEAAF 500
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A7Y4WRW8_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4WRW8_9PROT)

HSP 1 Score: 540 bits (1390), Expect = 4.530e-185
Identity = 264/357 (73.95%), Postives = 296/357 (82.91%), Query Frame = 3 
Query: 1068 FSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFA 2138
            FSFA+ A D AARTG+I T RGEIRTPAFMPVGTAGTVKAMLP +VRE GADI+LGNTYHLMLRPGAERVA+LGGLHK MNWP PILTDSGG+QVMSL+QLRK+DE GV+F+SH+DG+ H LTPERSME+Q LLGSDI MVLDECTPFPA    AE SM LSMRWA+RSKTAF  APG ALFGI+QG IYP+LRE+SA AL +IGF GYA+GGLAVGEGQ  MF  ++ T P LP +RPRYLMGVGKP DIVGAV+RG+DMFDCVLPTRSGR GQAFT  G +N+RNA HAED RPL+    CPA R+Y RAYLHHLVKS EIL SMLLTWHNL +YQ+L   L +AI    L + A
Sbjct:    4 FSFAIGATDAAARTGVITTARGEIRTPAFMPVGTAGTVKAMLPESVRETGADIILGNTYHLMLRPGAERVAKLGGLHKLMNWPRPILTDSGGFQVMSLAQLRKLDETGVSFQSHLDGAMHHLTPERSMEIQALLGSDIHMVLDECTPFPANERDAESSMELSMRWAKRSKTAFREAPGRALFGIIQGSIYPKLRERSANALREIGFPGYAVGGLAVGEGQARMFEVLDFTLPHLPTERPRYLMGVGKPDDIVGAVMRGIDMFDCVLPTRSGRNGQAFTKRGPVNLRNARHAEDPRPLEADCRCPACREYCRAYLHHLVKSDEILASMLLTWHNLTHYQDLTAALREAITQKRLADHA 360
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A2H0QXA5_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49 TaxID=1973900 RepID=A0A2H0QXA5_9PROT)

HSP 1 Score: 530 bits (1366), Expect = 1.550e-181
Identity = 256/361 (70.91%), Postives = 299/361 (82.83%), Query Frame = 3 
Query: 1065 QFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEF 2147
            +FSF +  +DG +RTG++ T  GEIRTPAFMPVGTA TVKAMLP +V+  GADI+LGNTYHLMLRP AER+A LGGLHKFMNW  PILTDSGG+QVMSLSQ+RKI E+GV FRSHIDGS H+L+PERSME+Q LLGSDI M+ DECTP+PAT E AEKSMHLS+RWA+RSK A+    G+ LFGIVQG +Y +LR++SA+ L +IGFDGYAIGGLAVGEGQE MF T++ TTP LP DRPRYLMGVGKP D+VGAV RGVDMFDCVLPTRSGR GQAFTS+G +N+ NA + +D+  LD +  CPA ++YSRAY+HHLVKSKEILGSML+TWHNL YYQNLM  + DAI  G   EF N F
Sbjct:    3 KFSFKINNKDGKSRTGVVSTAHGEIRTPAFMPVGTAATVKAMLPESVKSTGADIILGNTYHLMLRPTAERIANLGGLHKFMNWNAPILTDSGGFQVMSLSQIRKISEEGVQFRSHIDGSKHMLSPERSMEIQHLLGSDITMIFDECTPYPATKEVAEKSMHLSLRWAKRSKDAYKVRSGYGLFGIVQGSVYEDLRKESAQKLQEIGFDGYAIGGLAVGEGQELMFETLDYTTPMLPEDRPRYLMGVGKPDDLVGAVKRGVDMFDCVLPTRSGRNGQAFTSKGAINILNAKYKDDTAALDENCYCPACKNYSRAYIHHLVKSKEILGSMLMTWHNLQYYQNLMAAMRDAIDKGRFEEFENSF 363
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A1M7TGF1_9RHOB (Queuine tRNA-ribosyltransferase n=2 Tax=Oceanicella actignis TaxID=1189325 RepID=A0A1M7TGF1_9RHOB)

HSP 1 Score: 528 bits (1361), Expect = 1.100e-180
Identity = 257/362 (70.99%), Postives = 296/362 (81.77%), Query Frame = 3 
Query: 1062 SQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEF 2147
            ++FSF V A DGAARTG++ TPRG+IRTPAFMPVGTA TVKAMLP  VR  GADI+LGNTYHLMLRPGAER+ARLGGLH+FMNW  PILTDSGG+QVMSL+ LRK+DE+GVTF+SH+DGS H LTPERSME+Q LLGSDI+M  DECTPFPA    A +SM LSMRWA RS+ AF + PGHALFGI QG ++ ELRE+S++AL  IGFDGYAIGGLAVGEGQE+MFA ++     LP D+PRYLMGVGKP DIVGAV RGVDMFDCVLPTRSGRTGQA T  G +N+RNA H +D RPLD    CP  R+YSRAYLHH+ K++EI+ +MLLTWHNL YYQ LM+ L DAI AG L  F  +F
Sbjct:    2 TRFSFTVHATDGAARTGVVSTPRGQIRTPAFMPVGTAATVKAMLPENVRATGADIILGNTYHLMLRPGAERIARLGGLHRFMNWERPILTDSGGFQVMSLAGLRKLDERGVTFKSHVDGSRHELTPERSMEIQRLLGSDIVMCFDECTPFPADEATAAESMRLSMRWAARSREAFGDRPGHALFGIQQGSVFRELREESSQALRAIGFDGYAIGGLAVGEGQEAMFAVLDYAPGLLPEDKPRYLMGVGKPDDIVGAVQRGVDMFDCVLPTRSGRTGQALTRRGAVNLRNARHQDDPRPLDPDCACPCCRNYSRAYLHHVHKAQEIIAAMLLTWHNLHYYQELMQGLRDAIAAGRLDAFVADF 363
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A2W5NKJ5_RHOSU (Queuine tRNA-ribosyltransferase n=1 Tax=Rhodovulum sulfidophilum TaxID=35806 RepID=A0A2W5NKJ5_RHOSU)

HSP 1 Score: 528 bits (1360), Expect = 1.550e-180
Identity = 257/362 (70.99%), Postives = 295/362 (81.49%), Query Frame = 3 
Query: 1062 SQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEF 2147
            S+  F + ARDG ARTG+++ PRGEIRTPAFMPVGTAGTVKAMLP +VRE GADI+LGNTYHLMLRPGAERVARLGGLH+FMNW  PILTDSGG+QVMSL++LRK+ E+GVTF+SH+DGS H L+PE SME+Q LLGSDI+M  DEC   PAT E    SM LSMRWA RS+ AF + PGHALFGI+QGG+  +LRE+SA+AL  IGFDGYAIGGLAVGEGQE+MF  ++    FLP DRPRYLMGVGKP DIVGAV+RGVDMFDCVLP+RSGRTGQ FT  G LN++NA HAED RPLD +  CPA R YSRAYLHH+ K+ EI+ SMLLTWHNL YYQ+L+  L  AI  G L  FA EF
Sbjct:    2 SRIEFDIAARDGMARTGVLRMPRGEIRTPAFMPVGTAGTVKAMLPESVRETGADILLGNTYHLMLRPGAERVARLGGLHRFMNWERPILTDSGGFQVMSLNELRKLTEEGVTFKSHVDGSTHFLSPETSMEIQRLLGSDIVMCFDECPALPATEEAVAASMRLSMRWALRSREAFGDRPGHALFGIMQGGVTRDLREESAEALRGIGFDGYAIGGLAVGEGQEAMFGVLDYAPGFLPEDRPRYLMGVGKPDDIVGAVMRGVDMFDCVLPSRSGRTGQVFTRRGALNIKNARHAEDPRPLDEACGCPACRSYSRAYLHHVFKASEIIASMLLTWHNLRYYQDLVAGLRAAIAEGRLAAFAAEF 363
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A2N3CN79_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-2 TaxID=2013665 RepID=A0A2N3CN79_9PROT)

HSP 1 Score: 528 bits (1359), Expect = 2.930e-180
Identity = 260/368 (70.65%), Postives = 295/368 (80.16%), Query Frame = 3 
Query: 1059 SSQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEFGVLTE 2162
            S  FSF + ARDG ARTG+I TPRGEIRTPAFMPVGTA TVKAMLP  VR  GADI+LGNTYHLMLRPGAERVARLGGLH+FMNW  PILTDSGGYQVMSL+ LRKI E GV F+SHIDGSAHLL+PE SME+Q LLGSDI+M  DECTP PAT +QA  SM LSMRWAERS+ AF   PGHALFGI QG ++ +LR +SA+ L  IGF+GYAIGGLAVGEGQ +MF  ++     LP DRPRYLMGVGKP DIVGAV RGVDMFDCVLPTRSGRTGQAFT +GV+N+RNA H +D+ PLD +  CPA R YSRAYLHH+ ++ EI+ +MLLTWHNL YYQ LM  L  AI AG L +F ++F V  +
Sbjct:    2 SGSFSFRIDARDGRARTGVIATPRGEIRTPAFMPVGTAATVKAMLPENVRATGADILLGNTYHLMLRPGAERVARLGGLHRFMNWERPILTDSGGYQVMSLADLRKISEDGVRFKSHIDGSAHLLSPETSMEIQRLLGSDIVMAFDECTPHPATEDQAAGSMRLSMRWAERSRAAFGERPGHALFGIQQGALFRDLRAESAERLRAIGFEGYAIGGLAVGEGQAAMFEVLDYAPAMLPEDRPRYLMGVGKPDDIVGAVERGVDMFDCVLPTRSGRTGQAFTRQGVVNIRNARHRDDAGPLDPACTCPACRSYSRAYLHHVHRAGEIIAAMLLTWHNLHYYQELMAGLRTAIAAGRLADFTHDFRVAQD 369
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A358MCU1_9RHOB (Queuine tRNA-ribosyltransferase n=2 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A358MCU1_9RHOB)

HSP 1 Score: 527 bits (1358), Expect = 3.230e-180
Identity = 257/363 (70.80%), Postives = 298/363 (82.09%), Query Frame = 3 
Query: 1059 SSQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEF 2147
            + +F+FA+ A DGAARTG+I TPRGEIRTPAFMPVGTA TVKAM+P +VRE GADI+LGNTYHLMLRPGAERVAR+GGLH+FMNW  PILTDSGG+QVMSL+ LRK+ E+GVTFRSHIDGS H LTPERSME+Q LLGSDI+M  DEC   PA   +   SM LSMRWA RSK AF + PGHALFGI+QGG+  +LRE+SAKAL DIGFDGYAIGGLAVGEGQE+MF+ ++    FLP D+PRYLMGVGKP DIVGAV RGVDM DCVLP+RSGRTGQ +T  G +N+RNA HA+D RPLD    CPA ++YSRAYLHH+VK++EI+GSMLLTWHNL YYQ+LM  +  AI AG    +  EF
Sbjct:    2 TQRFTFALQATDGAARTGVIHTPRGEIRTPAFMPVGTAATVKAMMPESVRETGADILLGNTYHLMLRPGAERVARMGGLHQFMNWQRPILTDSGGFQVMSLADLRKLTEKGVTFRSHIDGSKHELTPERSMEIQKLLGSDIVMCFDECPALPADEARVAASMQLSMRWAARSKEAFGDRPGHALFGIMQGGVTKDLREESAKALTDIGFDGYAIGGLAVGEGQEAMFSVLDYAPGFLPQDKPRYLMGVGKPDDIVGAVKRGVDMMDCVLPSRSGRTGQGWTRRGQVNLRNARHADDPRPLDAECGCPACQNYSRAYLHHVVKAQEIIGSMLLTWHNLRYYQDLMAGMRAAIGAGRFAMWEAEF 364
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BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Match: A0A1G9FED4_9RHOB (Queuine tRNA-ribosyltransferase n=1 Tax=Meinhardsimonia xiamenensis TaxID=990712 RepID=A0A1G9FED4_9RHOB)

HSP 1 Score: 526 bits (1356), Expect = 6.250e-180
Identity = 258/365 (70.68%), Postives = 296/365 (81.10%), Query Frame = 3 
Query: 1062 SQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPGTVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQVMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDECTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELREKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMGVGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDSRPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRLGDAIRAGGLVEFANEFGVL 2156
            S F F + A DG ARTG+I+TPRGEIRTPAFMPVGTAGTVKAMLP  VR  GADI+LGNTYHLMLRPGAER+ARLGGLH+FMNWP PILTDSGG+QVMSL++LR+IDE+GVTF+SHIDG+ H LTPERSME+Q LLGSDI+M  DEC   PA   + E+SM LSMRWA RS+ AF   PGHALFGI QGG+  +LR +SA+AL  IGFDGYAIGGLAVGEGQ +MF  ++     LPADRPRYLMGVGKP DIVGAV+RGVDM DCVLPTRSGRTGQAFT  GV+N+RNA H +D RPLD +  CPA R YSRAYLHH+V++ EI+G+ML+TWHNL YYQ+LM  L +AI  G L  F  EF  L
Sbjct:    2 SGFRFTIHATDGKARTGLIETPRGEIRTPAFMPVGTAGTVKAMLPENVRATGADIILGNTYHLMLRPGAERIARLGGLHRFMNWPRPILTDSGGFQVMSLAELRRIDERGVTFQSHIDGARHELTPERSMEIQRLLGSDIVMAFDECPALPADRARIEESMRLSMRWAARSREAFGERPGHALFGIQQGGLERDLRAESAEALKAIGFDGYAIGGLAVGEGQAAMFEVLDYAPDMLPADRPRYLMGVGKPDDIVGAVVRGVDMMDCVLPTRSGRTGQAFTRRGVVNIRNARHRDDPRPLDEACACPACRSYSRAYLHHVVRAGEIIGAMLMTWHNLQYYQDLMAGLREAIAGGRLDAFVAEFEAL 366
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig759.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LR22_9PROT1.360e-22767.68Queuine tRNA-ribosyltransferase n=3 Tax=Alphaprote... [more]
A0A3C0TSZ7_9PROT2.000e-21180.87Queuine tRNA-ribosyltransferase n=1 Tax=Alphaprote... [more]
A0A7Y0DY22_9PROT8.170e-19158.70Queuine tRNA-ribosyltransferase n=2 Tax=Pacificisp... [more]
A0A7Y4WRW8_9PROT4.530e-18573.95Queuine tRNA-ribosyltransferase n=1 Tax=Alphaprote... [more]
A0A2H0QXA5_9PROT1.550e-18170.91Queuine tRNA-ribosyltransferase n=1 Tax=Alphaprote... [more]
A0A1M7TGF1_9RHOB1.100e-18070.99Queuine tRNA-ribosyltransferase n=2 Tax=Oceanicell... [more]
A0A2W5NKJ5_RHOSU1.550e-18070.99Queuine tRNA-ribosyltransferase n=1 Tax=Rhodovulum... [more]
A0A2N3CN79_9PROT2.930e-18070.65Queuine tRNA-ribosyltransferase n=1 Tax=Alphaprote... [more]
A0A358MCU1_9RHOB3.230e-18070.80Queuine tRNA-ribosyltransferase n=2 Tax=Rhodobacte... [more]
A0A1G9FED4_9RHOB6.250e-18070.68Queuine tRNA-ribosyltransferase n=1 Tax=Meinhardsi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig759contigP-wetherbeei_contig759:323..2487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121271.AUCM01000001_gene3394
Preferred nametgt
PFAMsTGT
Model size2165
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00063
KEGG koko:K00773
KEGG ReactionR03789,R10209
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.75e-187
EggNOG OGsCOG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,2TR87@28211|Alphaproteobacteria
EC2.4.2.29
DescriptionCatalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
Cds size1116
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186989.7828214-UTR-P-wetherbeei_contig759:322..13711683186989.7828214-UTR-P-wetherbeei_contig759:322..1371Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig759 323..1371 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186989.8096316-CDS-P-wetherbeei_contig759:1371..24871683186989.8096316-CDS-P-wetherbeei_contig759:1371..2487Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig759 1372..2487 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig759.1.1prot_P-wetherbeei_contig759.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig759 1372..2487 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig759.1.1

>prot_P-wetherbeei_contig759.1.1 ID=prot_P-wetherbeei_contig759.1.1|Name=mRNA_P-wetherbeei_contig759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=372bp
MTASSQFSFAVTARDGAARTGIIQTPRGEIRTPAFMPVGTAGTVKAMLPG
TVRELGADIVLGNTYHLMLRPGAERVARLGGLHKFMNWPHPILTDSGGYQ
VMSLSQLRKIDEQGVTFRSHIDGSAHLLTPERSMEVQLLLGSDIIMVLDE
CTPFPATHEQAEKSMHLSMRWAERSKTAFANAPGHALFGIVQGGIYPELR
EKSAKALCDIGFDGYAIGGLAVGEGQESMFATVERTTPFLPADRPRYLMG
VGKPSDIVGAVLRGVDMFDCVLPTRSGRTGQAFTSEGVLNMRNACHAEDS
RPLDVSLDCPASRDYSRAYLHHLVKSKEILGSMLLTWHNLAYYQNLMRRL
GDAIRAGGLVEFANEFGVLTE*
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mRNA from alignment at P-wetherbeei_contig759:323..2487+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig759.1.1 ID=mRNA_P-wetherbeei_contig759.1.1|Name=mRNA_P-wetherbeei_contig759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2165bp|location=Sequence derived from alignment at P-wetherbeei_contig759:323..2487+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCGTGTTGAGCAATTTGATTTTTCTCTGCCTGAGGAATTGATTGCACT
GCGTCCTTCTATACCGCGTGATGCTGCGCGCTGTCTTGTTGTGCGGAATG
GTGTGTTTCAGGACCGGCACATGCGGGATCTTCCGCGATTGCTGGAGCCT
GGAGATTTGTTGGTGTTCAATGATACAACGGTCATCCCGGCGGCGCTGAC
CGGGGTCCGGCGGCGCGCCGATGGCAATGAGGCGCATATTCATCTCAATC
TGCATCAACGGGTTGGACCCGGGCGTTGGCGGGCCTTTGCCCGGCCCCTG
CGGCGTTTGCGTGTGCATGACACAATCACTTTTGCGCAAAATTTTACTGC
TGAGGTCATTGGCCTGGAAAAGGGCGCCGATGTCGCGCTGGATTTTAATC
TTTCCGCTGCTGTGCTGGATGCGGCCATAGCTGAACACGGGGCCATGCCT
CTGCCGCCTTATATTGCCGCGAAACGGCCTGTGGATGCGCGCGATGTTCA
GGACTATCAAACCCTGTTCGCGCGTATCGAGGGATCTGTGGCGGCCCCAA
CTGCGTCGCTGCATTTTACCGAAGCACTTCTGCAATCACTTGAGATTTGT
GGTATAAAGCATTGTTTTACAACATTGCATGTTGGGGCGGGTACATTCCT
GCCTGTAAAGGCCGAGGATACTGACAGCCATCAAATGCATGCCGAGTGGG
GTAATATTTCTGCGGAGACAGCGCAGATTATCAATGCGGCACGTAAGGCT
GGCGGGCGCGTGGTCGCGGTTGGCACGACGTCGCTGCGCCTGCTGGAAAG
CGCGGCGGCGGATGACGGAACAGTTAAAGCCTGGACGGGAGAAACCAGTA
TTTTTATTACGCCGGGATACCGGTTCAAAATAGTAGACGCCATGATCACC
AATTTTCATTTACCGAAATCGACTTTGTTTATGCTGGTGTCGGCTTTTTG
CGGGCTGGATGTGATGCAGGCGGCCTATCAACATGCTATTCGCACGGGAT
ACCGGTTTTATTCCTACGGGGACGGCAGTTTGCTGTTTCGGGCGCAACTA
TGACAGCTTCCTCGCAGTTTTCCTTTGCCGTAACAGCGCGGGATGGCGCC
GCGCGCACCGGTATTATCCAGACCCCGCGTGGTGAAATTCGCACCCCTGC
ATTTATGCCGGTCGGTACGGCTGGTACGGTGAAGGCCATGCTGCCCGGTA
CGGTGCGGGAACTGGGCGCGGATATTGTGCTGGGGAACACCTATCATCTG
ATGTTGCGTCCTGGAGCCGAGCGGGTGGCCAGACTGGGCGGGCTGCACAA
ATTCATGAACTGGCCGCACCCGATCTTGACAGATTCTGGCGGCTATCAGG
TTATGTCCCTGTCGCAGTTACGCAAGATCGACGAACAGGGGGTTACTTTC
CGCTCGCATATTGACGGTTCGGCGCATCTTCTGACGCCCGAGCGCAGCAT
GGAGGTTCAGTTACTGCTGGGGTCCGATATTATTATGGTGCTGGACGAAT
GCACGCCGTTCCCTGCGACCCACGAGCAGGCTGAAAAATCCATGCATCTG
TCCATGCGCTGGGCGGAGCGTTCAAAAACAGCGTTTGCAAATGCGCCGGG
ACATGCGCTGTTTGGTATTGTTCAGGGCGGCATTTATCCGGAGCTTCGGG
AGAAATCGGCAAAGGCGCTGTGCGATATTGGCTTTGACGGATATGCAATC
GGTGGTCTTGCTGTGGGCGAGGGGCAGGAAAGCATGTTTGCCACCGTGGA
GCGGACAACACCTTTTTTACCGGCTGACAGGCCGCGCTATCTGATGGGCG
TCGGCAAACCGTCGGATATTGTGGGTGCGGTATTGCGCGGGGTGGATATG
TTCGATTGCGTATTGCCCACCCGCAGCGGACGCACGGGGCAGGCCTTTAC
CAGCGAGGGGGTGCTGAATATGCGAAATGCCTGCCATGCCGAGGATTCGC
GTCCGCTGGACGTTAGCCTGGATTGCCCGGCAAGCCGCGATTATAGCCGC
GCTTATTTGCATCACCTTGTAAAATCAAAAGAAATATTAGGTTCAATGCT
GCTTACTTGGCATAATCTTGCCTATTATCAGAATCTGATGCGACGGCTAG
GGGATGCCATTCGGGCGGGTGGACTGGTGGAGTTTGCAAATGAGTTCGGG
GTGTTAACAGAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig759:323..2487+

>mRNA_P-wetherbeei_contig759.1.1 ID=mRNA_P-wetherbeei_contig759.1.1|Name=mRNA_P-wetherbeei_contig759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1116bp|location=Sequence derived from alignment at P-wetherbeei_contig759:323..2487+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGCTTCCTCGCAGTTTTCCTTTGCCGTAACAGCGCGGGATGGCGC
CGCGCGCACCGGTATTATCCAGACCCCGCGTGGTGAAATTCGCACCCCTG
CATTTATGCCGGTCGGTACGGCTGGTACGGTGAAGGCCATGCTGCCCGGT
ACGGTGCGGGAACTGGGCGCGGATATTGTGCTGGGGAACACCTATCATCT
GATGTTGCGTCCTGGAGCCGAGCGGGTGGCCAGACTGGGCGGGCTGCACA
AATTCATGAACTGGCCGCACCCGATCTTGACAGATTCTGGCGGCTATCAG
GTTATGTCCCTGTCGCAGTTACGCAAGATCGACGAACAGGGGGTTACTTT
CCGCTCGCATATTGACGGTTCGGCGCATCTTCTGACGCCCGAGCGCAGCA
TGGAGGTTCAGTTACTGCTGGGGTCCGATATTATTATGGTGCTGGACGAA
TGCACGCCGTTCCCTGCGACCCACGAGCAGGCTGAAAAATCCATGCATCT
GTCCATGCGCTGGGCGGAGCGTTCAAAAACAGCGTTTGCAAATGCGCCGG
GACATGCGCTGTTTGGTATTGTTCAGGGCGGCATTTATCCGGAGCTTCGG
GAGAAATCGGCAAAGGCGCTGTGCGATATTGGCTTTGACGGATATGCAAT
CGGTGGTCTTGCTGTGGGCGAGGGGCAGGAAAGCATGTTTGCCACCGTGG
AGCGGACAACACCTTTTTTACCGGCTGACAGGCCGCGCTATCTGATGGGC
GTCGGCAAACCGTCGGATATTGTGGGTGCGGTATTGCGCGGGGTGGATAT
GTTCGATTGCGTATTGCCCACCCGCAGCGGACGCACGGGGCAGGCCTTTA
CCAGCGAGGGGGTGCTGAATATGCGAAATGCCTGCCATGCCGAGGATTCG
CGTCCGCTGGACGTTAGCCTGGATTGCCCGGCAAGCCGCGATTATAGCCG
CGCTTATTTGCATCACCTTGTAAAATCAAAAGAAATATTAGGTTCAATGC
TGCTTACTTGGCATAATCTTGCCTATTATCAGAATCTGATGCGACGGCTA
GGGGATGCCATTCGGGCGGGTGGACTGGTGGAGTTTGCAAATGAGTTCGG
GGTGTTAACAGAATGA
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