mRNA_P-wetherbeei_contig7585.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A835ZHE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHE8_9STRA) HSP 1 Score: 167 bits (423), Expect = 9.390e-48 Identity = 109/198 (55.05%), Postives = 132/198 (66.67%), Query Frame = 1
Query: 100 AFVPCVSIAAVGSATLAGYAIVSSPPQASWWHLARRPA-----NCRASPKM--MARGGRFRPDRGESKRQARVAQLVTAELASIIRRGHAVKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYGNVLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVSS--STGGGGVGGSD 666
AF C ++ A A +A A S+ P A+ LA CRAS M R RF+ R ESKRQAR++QL+TAELASIIR GH VK + L+D +RSKIS+VDV +SPDLR AR+ VSVYG+ LEKREAY W VRN IR AL+ L+DMK VPEL F+QTD+GAAVDVM LI +V+S +T G VGG D
Sbjct: 3 AFAVCAALLAGAPAAVAFLAPASARPAATTTCLAPTQTASATHTCRASRTQLRMGRANRFKAARPESKRQARISQLLTAELASIIRLGHHVKGSKALSDELRSKISIVDVNVSPDLRNARIFVSVYGDRLEKREAYGWCVRNTGGIRFALSQRLKDMKGVPELTFQQTDIGAAVDVMHLIGKVNSGSTTESGMVGGFD 200
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: D8LBD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD9_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.680e-46 Identity = 87/132 (65.91%), Postives = 106/132 (80.30%), Query Frame = 1
Query: 235 MMARGGRFRPDRGESKRQARVAQLVTAELASIIRRGHAVKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYGNVLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVS 630
MMARG FR ESKRQARV+QL+T ELA I+R GH +KT D++ D VR +I+VVDV MSPDLR+A+V +SVYG+VLEKREAYAW V+N + IR AL + L+ MK VPELFF+ TD+ AAVD+MALIDRVS
Sbjct: 72 MMARGSTFRSTT-ESKRQARVSQLLTGELAKILRLGHGIKTKDKIDDDVRCRIAVVDVDMSPDLRSAKVFISVYGDVLEKREAYAWCVKNTKAIRMALCAELKGMKRVPELFFKDTDISAAVDLMALIDRVS 202
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A7S2DN30_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN30_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.260e-33 Identity = 73/164 (44.51%), Postives = 108/164 (65.85%), Query Frame = 1
Query: 238 MARGGRFRPDRGESKRQARVAQLVTAELASIIRRGHAVKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYGNVLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVSSSTGGGGVGGSDGGYGDGHGAGPTGVIDGLDFD 729
M+RG R ESKRQ RV+Q++ +E+ +I+RRG ++ D +R KIS+VDV MSPDLRTA+V VSV+G+++++R+AY+WLV N++ I+ +LA +L MK+VP+L+F++TD+ AAVDVM I+ + + P GVI GLDFD
Sbjct: 45 MSRGNAVSKGR-ESKRQGRVSQVIRSEIVTILRRGSMKYMKKDIGDTLRQKISIVDVHMSPDLRTAKVYVSVFGDIVDRRQAYSWLVMNSKAIKHSLAQSLSAMKTVPDLYFKETDLAAAVDVMTTIESIHAEASNL----------------PRGVIQGLDFD 191
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A7S2SUM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.810e-28 Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 268 RGESKRQARVAQLVTAELASIIRRGHAVKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYGNVLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVS 630
R ESKRQARVAQLV AEL+ +IR+G T + + R KIS+VDV MSPDLR A+V VSV+ + E R+AYAWLV+++ R L+ LR M+SVP L FR+ DV AVDVM ID ++
Sbjct: 64 RDESKRQARVAQLVRAELSQVIRQGTRANTKG-ITEATRQKISIVDVHMSPDLRNAKVFVSVFASGPESRQAYAWLVQSSGAFRHELSQELRHMRSVPALTFRRADVAEAVDVMVAIDNLN 183
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A1Z5KIK3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIK3_FISSO) HSP 1 Score: 115 bits (287), Expect = 3.920e-28 Identity = 76/157 (48.41%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 277 SKRQARVAQLVTAELASIIRRGHAVKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYGNV------LEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVSSSTGGGGVGGSDGGYGDGHGAGPTGVIDGLDFD 729
SKRQ RV QLV EL I+ +G A + A+ L +R +ISVV +SPDLR AR+ +SV ++ ++KR AYAWLV NA+P+R AL+ L MKS PEL F Q DV AAVDVM LID++SS G+D G G P+G++ G+DFD
Sbjct: 11 SKRQERVGQLVRTELGKILHQGSASR-AEFLDADLRQRISVVKADVSPDLRQARISISVSASLAREDTAMDKRRAYAWLVNNAKPLRHALSQKLSHMKSCPELKFVQVDVAAAVDVMYLIDKISS--------GNDKRSGSLLGESPSGIMGGVDFD 158
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A7R9W0U4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0U4_9STRA) HSP 1 Score: 113 bits (282), Expect = 9.360e-27 Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 277 SKRQARVAQLVTAELASIIRRGHAVKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYG----NVLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVS 630
SKRQ RV +V +ELA II+ G +K D + D +R +I+VV+ +SPDLR ARV VS+ G + ++KR AY+WLVR+ + IR A+A L+ MK P+L F Q DVGAAVDVM LI++VS
Sbjct: 55 SKRQERVGHVVRSELARIIQAGFPIKNVDPIDDELRRRINVVNADVSPDLRHARVTVSIIGRGETSTVDKRRAYSWLVRSTKMIRHAMAQRLKHMKVCPDLKFVQADVGAAVDVMRLIEKVS 176
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: B7FY13_PHATC (Chitinase glycoside hydrolase family 18, ribosome-binding factor n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FY13_PHATC) HSP 1 Score: 112 bits (281), Expect = 1.410e-26 Identity = 83/185 (44.86%), Postives = 103/185 (55.68%), Query Frame = 1
Query: 277 SKRQARVAQLVTAELASIIRRGHAVK--TADELADHVRSKISVVDVLMSPDLRTARVLVSV----------YGNVLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVSSSTGGGGVGGSDGGYG-------DGHGAGPTGVIDGLDFDAAFDGNDEEDDDVGF 774
SKRQ RV LV E+++I+ G +K A+ L +R +ISVV +SPDLR AR+ VSV Y ++KR AYAWLVRN +PIR LA + MKS P L F Q DV AAVDVM LID+VS GY +G PTGV+DG+DFD FD D ++DD F
Sbjct: 69 SKRQERVGHLVRTEISNILH-GGVIKGQDAEYLDAELRQRISVVSADISPDLRQARISVSVRAPPRNDQAEYNPAVDKRRAYAWLVRNTKPIRHTLAQRMSHMKSCPNLSFVQVDVAAAVDVMYLIDKVSQ------------GYKRDKVDLFNGENV-PTGVMDGIDFDEEFDEEDWDEDDEDF 239
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A7S2UPV8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPV8_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.570e-26 Identity = 74/164 (45.12%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 277 SKRQARVAQLVTAELASIIRRGHAVKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYGN--------VLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVSSSTGGGGVGGSDGGYGDGHGAGPTGVIDGLDFDAAFDG 744
SKRQ RV LV AE++SI+ H +K +D L +R +ISVV+V +SPDL AR+ VS+ G V+++R AY+WLVR+ + IR ALA L MK VP L F DVGAAVDVM LI++V+ GY PTG++ G+DFD DG
Sbjct: 63 SKRQERVGHLVRAEISSILTLSHEIKHSDYLEGELRKRISVVNVDVSPDLAQARITVSLVGGNHDTKEDAVVDQRRAYSWLVRSTKMIRHALAQRLSHMKGVPNLTFVLADVGAAVDVMQLIEKVAK------------GYKREDLDDPTGMVMGMDFDDDDDG 214
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A7S2NYX9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYX9_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.380e-25 Identity = 68/145 (46.90%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 235 MMARGGRFRPDRGESKRQARVAQLVTAELASIIRRGHAVKTAD-ELADHVRSKISVVDVLMSPDLRTARVLVSVYGN------------VLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVS 630
M+ R R + +SKRQ RV QLV +E+ASII+ GH +K D L +R +ISVV+ +SPDLR AR+ VSV V+EKR AY+WLV++ + IR ALA L MK++P L F Q DVGAAVDVM I+ ++
Sbjct: 53 MIQRSNRRTANIDKSKRQFRVGQLVRSEIASIIKLGHEIKHTDGSLDSDLRLRISVVNADVSPDLRQARITVSVISKPNTDETAKLSDTVVEKRVAYSWLVKHTKNIRHALAQRLSHMKTIPNLTFAQADVGAAVDVMNKINNIN 197
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Match: A0A7S4A318_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A318_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.920e-23 Identity = 64/129 (49.61%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 250 GRFRPDRGES-KRQARVAQLVTAELASIIRRGHA-VKTADELADHVRSKISVVDVLMSPDLRTARVLVSVYGNVLEKREAYAWLVRNARPIRGALASNLRDMKSVPELFFRQTDVGAAVDVMALIDRVS 630
G R + GE+ +RQARVAQ V +ELA +IR G VK+ + V SVVDV +SPDLR A V+ G+ +KREA++WLV NA+ R ALA LR K VPE+ FR+ DVG AV +M LID +
Sbjct: 39 GNRRAETGEATRRQARVAQQVRSELAILIRDGATRVKSTARVDPAVLRATSVVDVTVSPDLRAATATVTTRGDAAQKREAFSWLVANAKGFRYALAQRLRHSKRVPEVTFRKADVGGAVALMRLIDEAN 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7585.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7585.1.1 >prot_P-wetherbeei_contig7585.1.1 ID=prot_P-wetherbeei_contig7585.1.1|Name=mRNA_P-wetherbeei_contig7585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp MPKANTIQSGRKRKAPLSALAVAIAVALPSRSSAFVPCVSIAAVGSATLAback to top mRNA from alignment at P-wetherbeei_contig7585:2088..2861- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7585.1.1 ID=mRNA_P-wetherbeei_contig7585.1.1|Name=mRNA_P-wetherbeei_contig7585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig7585:2088..2861- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7585:2088..2861- >mRNA_P-wetherbeei_contig7585.1.1 ID=mRNA_P-wetherbeei_contig7585.1.1|Name=mRNA_P-wetherbeei_contig7585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig7585:2088..2861- (Phaeothamnion wetherbeei SAG_119_79)back to top |