mRNA_P-wetherbeei_contig758.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig758.4.2
Unique NamemRNA_P-wetherbeei_contig758.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A6H5KG41_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 5.300e-37
Identity = 86/205 (41.95%), Postives = 118/205 (57.56%), Query Frame = 3 
Query:  228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRR--APQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
            +Y K+ EL +  L+ATSGDQGDV MF+EWL R+A L++L +SRP+    LAH ARR+ A++LR+  A Q+V+AL+GG                                                +  L+WLD+LGALQ VP+GAHG ASRFALSLLD  +R  M+  EA  ++     QL +RYL++S  F ++VVD++GCRDV
Sbjct:   31 EYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVAC------------------------------------------QPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 193
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: D7FKH0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 5.910e-32
Identity = 85/205 (41.46%), Postives = 116/205 (56.59%), Query Frame = 3 
Query:  228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRR--APQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
            +Y K+ EL +  L+A SGDQGDV MF+EWL R+A L++L +SRP+    LAH ARR+ A++LR+  A Q+V+ALLGG                                                +  L+WLD+LGALQ V +GAHG ASRFALSLLD  +R  M+  EA  ++     QL +RYL++S  F ++VVD++GCRDV
Sbjct:   58 EYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVA------------------------------------------WQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 220
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A835ZGL4_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGL4_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.100e-30
Identity = 81/205 (39.51%), Postives = 107/205 (52.20%), Query Frame = 3 
Query:  231 YDKISELGERTLIATSGD-QGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTE-GEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDVG 839
            Y K+ +L +    A SG  QGDV +F++WL R   L R+ TS  +++ A A LARR  A+ LRR P  V+ LLGG +                                               A LYWLD +G+LQ +P+GAHG AS F +S+LDK +R D TE  +AV ++RD VAQL  RYL+  G FQ+ VVD  GCRD+G
Sbjct:    5 YKKVVQLDDTLAAAASGPKQGDVEVFVDWLQRVLCLKRM-TSGGLTVSAAASLARRQLAQDLRRRPMDVNMLLGGWDKVRG-------------------------------------------AQLYWLDGMGSLQPIPFGAHGAASSFVISVLDKGHRGDETELRDAVRLMRDCVAQLSTRYLVRGGGFQMMVVDARGCRDIG 165
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A836CPT6_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT6_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.360e-24
Identity = 71/201 (35.32%), Postives = 99/201 (49.25%), Query Frame = 3 
Query:  228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCR 830
            D DKI EL    ++A +G Q D  +F E++ ++  L  L+    +S  A A+  RR+ A  LR+ P  V+ L+GG++ AGA A                                           LYWLD LG LQ V YGA G+ + F LSLLD+ YR  M E +AV +VR  +A L +R+LI    F I+VVD++G R
Sbjct:   31 DLDKIKELDSHKMMALAGPQADCNLFGEYIQKNMALYELNNDLRLSTKAAANYIRRELATALRKGPYQVNMLMGGVD-AGAAA-------------------------------------------LYWLDYLGTLQPVKYGAQGYGAAFTLSLLDRSYRVGMAEADAVELVRSCIAALHKRFLIAQPNFVIKVVDKDGIR 187
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A5J4YZT1_PORPP (Proteasome subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZT1_PORPP)

HSP 1 Score: 105 bits (262), Expect = 1.930e-22
Identity = 63/204 (30.88%), Postives = 102/204 (50.00%), Query Frame = 3 
Query:  225 QDYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
            +D DKI EL    L+  +G+ GDVA F E++ ++ +L +L T    S  A+A+  R + A+ LR+ P SV+ LLGG +                                                 +++LD LG L ++P+ A G+ + F L+ LD+ Y+P+M+E EA+ V+R ++ ++  R+LI    F I+VVD+NG R V
Sbjct:   30 EDMDKIMELDRHRLLCMAGEPGDVAQFTEYVQKNVHLYQLRTGVSQSTRAIANFTRNELAKSLRKNPYSVNLLLGGYDQHDGPE-------------------------------------------VFYLDYLGTLHKMPFSAQGYCAYFILATLDRYYKPNMSEQEALEVMRKAIDEVRIRFLIKQPDFLIKVVDKNGIRTV 190
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A0L0HH50_SPIPD (Proteasome subunit beta n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HH50_SPIPD)

HSP 1 Score: 105 bits (262), Expect = 2.040e-22
Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 3 
Query:  234 DKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
            DK  EL + TL+  +G+ GD   F E++ R+  L  +    P+S+HA A+  RR+ AE LR R P  VS L+ G +P                                             +  LYWLD LGA+ ++ + AHG+AS F +S +D+ ++ D++  EA+++++  +A+L  R++     F ++VVD+NG R++
Sbjct:   33 DKSRELNKHTLMLYTGEAGDTVQFAEYIQRNIQLYGIRNGIPLSVHATANFTRRELAESLRSRNPYHVSVLIAGTDPKTG------------------------------------------KPELYWLDYLGAMVKMNFAAHGYASYFCMSTMDRYWKEDLSVEEAISLLKKCIAELKTRFIAQLPEFMVKVVDKNGVREI 192
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A1J5WPC6_9MICR (Proteasome subunit beta n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WPC6_9MICR)

HSP 1 Score: 105 bits (262), Expect = 2.760e-22
Identity = 67/204 (32.84%), Postives = 100/204 (49.02%), Query Frame = 3 
Query:  225 QDYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRL-STSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCR 830
            QD D++ EL    L+A  GD GD + F E++     L  L +  R MS+HALA L R+  AE+LR R     + L+GG +     +                                           LYW+D L A Q+VPY AHG+A+ F  S+LD+ Y  D+TE EA+ ++R  + +L  R+L++ G F I+++D+NG R
Sbjct:   30 QDKDRVLELNGNALMALVGDSGDASAFGEYVKAITALEELRNNERKMSVHALASLVRKKLAEELRSRGAYQTNLLVGGCDSHATESLGVVHTPS-----------------------------------LYWIDHLAAAQKVPYAAHGYAAFFCTSILDRAYNEDLTEEEALGLIRLCLDELRTRFLVSQGDFIIKIIDKNGTR 198
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A067N4K4_PLEOS (Proteasome subunit beta n=2 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A067N4K4_PLEOS)

HSP 1 Score: 103 bits (257), Expect = 9.590e-22
Identity = 64/205 (31.22%), Postives = 101/205 (49.27%), Query Frame = 3 
Query:  228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIE-PAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
            D DK+  LG   L+A SG+ GD   F E+++R+  L  +  +  +S  A A   RR  AE LR R P SV+ LLGG + PA                                               LYW+D LG +  VP+GAHG+ S FALSLLD+ + PD +  E +A ++  + ++ +R +++  ++ ++VVD++G R++
Sbjct:   31 DEDKVKALGPHLLMAHSGEPGDTLQFAEYVERNIRLYNIRHNYSLSPSAAASWVRRSLAESLRSRHPYSVNLLLGGYDVPA-------------------------------------------KEPHLYWIDYLGTMSEVPFGAHGYGSYFALSLLDRYHNPDASLEEGIATLKRCIDEVAKRLIVSPSKYTVKVVDKDGVREI 192
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: F8NQX0_SERL9 (Proteasome subunit beta n=4 Tax=Agaricomycetidae TaxID=452333 RepID=F8NQX0_SERL9)

HSP 1 Score: 103 bits (256), Expect = 1.310e-21
Identity = 64/204 (31.37%), Postives = 102/204 (50.00%), Query Frame = 3 
Query:  228 DYDKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
            D DKI E+    L+A SG+ GD   F E+++R+  L ++    P+   A A   RR  A+ LR R+P SV+ L+GG + A                                               LYW+D LG    VP+GAHG+ S FALSLLD+ + P+ +  E +A ++  V ++ +R +++ GR++++VVD++G R+V
Sbjct:   31 DEDKIKEISPHLLMAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSRSPYSVNLLVGGYDTA------------------------------------------THEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEGLATLKRCVDEVAKRLVVSPGRYKVKVVDKDGVREV 192
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BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Match: A0A507F6F1_9FUNG (Proteasome subunit beta n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F6F1_9FUNG)

HSP 1 Score: 103 bits (258), Expect = 3.160e-21
Identity = 59/202 (29.21%), Postives = 101/202 (50.00%), Query Frame = 3 
Query:  234 DKISELGERTLIATSGDQGDVAMFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLR-RAPQSVSALLGGIEPAGAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRDSVAQLGQRYLINSGRFQIRVVDRNGCRDV 836
            DK  EL + TL+  +G+ GD   F E++ R+  L  +    P+S+HA A+  RR+ AE LR R P  VS L+ G +P                                             +  LYWLD LGA+ ++ + AHG+AS F +S +D+ ++ D++  EA+++++  +A+L  R++     F ++VVD++G R++
Sbjct:   97 DKSRELNKHTLMLYTGESGDTVQFAEYIQRNIQLYGIRNGIPLSVHATANFTRRELAESLRSRNPYHVSVLIAGTDPKTG------------------------------------------KPELYWLDYLGAMVKMNFAAHGYASYFCMSTMDRYWKEDLSVEEAISLLKKCIAELKTRFIAQLPEFMVKVVDKDGVREI 256
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig758.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG41_9PHAE5.300e-3741.95Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKH0_ECTSI5.910e-3241.46Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835ZGL4_9STRA3.100e-3039.51Nucleophile aminohydrolase n=1 Tax=Tribonema minus... [more]
A0A836CPT6_9STRA2.360e-2435.32Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
A0A5J4YZT1_PORPP1.930e-2230.88Proteasome subunit beta n=1 Tax=Porphyridium purpu... [more]
A0A0L0HH50_SPIPD2.040e-2229.70Proteasome subunit beta n=1 Tax=Spizellomyces punc... [more]
A0A1J5WPC6_9MICR2.760e-2232.84Proteasome subunit beta n=1 Tax=Amphiamblys sp. WS... [more]
A0A067N4K4_PLEOS9.590e-2231.22Proteasome subunit beta n=2 Tax=Pleurotus ostreatu... [more]
F8NQX0_SERL91.310e-2131.37Proteasome subunit beta n=4 Tax=Agaricomycetidae T... [more]
A0A507F6F1_9FUNG3.160e-2129.21Proteasome subunit beta n=1 Tax=Spizellomyces sp. ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig758contigP-wetherbeei_contig758:4475..6608 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKH0
Preferred nameSCYL2
PFAMsPkinase,Proteasome
Model size1872
Max annot lvl2759|Eukaryota
KEGG koko:K02734,ko:K08471,ko:K12847,ko:K16738,ko:K17541,ko:K18626
KEGG Pathwayko03040,ko03050,map03040,map03050
KEGG ModuleM00337,M00340,M00354
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000166,GO:0000502,GO:0002090,GO:0002092,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0007034,GO:0007041,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007346,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009893,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010498,GO:0010499,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010648,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0014070,GO:0016020,GO:0016055,GO:0016192,GO:0016301,GO:0016310,GO:0016504,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030071,GO:0030100,GO:0030111,GO:0030135,GO:0030136,GO:0030162,GO:0030163,GO:0030178,GO:0030234,GO:0030554,GO:0031090,GO:0031323,GO:0031325,GO:0031331,GO:0031410,GO:0031597,GO:0031623,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032268,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032588,GO:0032879,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0035639,GO:0036094,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043112,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045807,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046907,GO:0048046,GO:0048259,GO:0048260,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060070,GO:0060255,GO:0060627,GO:0060828,GO:0061133,GO:0061134,GO:0061135,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0080090,GO:0090068,GO:0090090,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098657,GO:0098772,GO:0098791,GO:0098805,GO:0098827,GO:0140096,GO:0198738,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902531,GO:1902532,GO:1903052,GO:1903364,GO:1903432,GO:1904262,GO:1905114,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2000286,GO:2000369,GO:2000370,GO:2001252
Exons2
Evalue2.82e-27
EggNOG OGsCOG0638@1|root,KOG2137@1|root,KOG0177@2759|Eukaryota,KOG2137@2759|Eukaryota
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-12_002115.1
EC3.4.25.1
Descriptionreceptor internalization involved in canonical Wnt signaling pathway
Cds size549
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko03036,ko03041,ko03051,ko04030,ko04131,ko04812
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186989.394263-UTR-P-wetherbeei_contig758:4474..54981683186989.394263-UTR-P-wetherbeei_contig758:4474..5498Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig758 4475..5498 -
1683186989.437272-UTR-P-wetherbeei_contig758:6309..66081683186989.437272-UTR-P-wetherbeei_contig758:6309..6608Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig758 6310..6608 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186989.4156349-CDS-P-wetherbeei_contig758:5498..60261683186989.4156349-CDS-P-wetherbeei_contig758:5498..6026Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig758 5499..6026 -
1683186989.427274-CDS-P-wetherbeei_contig758:6288..63091683186989.427274-CDS-P-wetherbeei_contig758:6288..6309Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig758 6289..6309 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig758.4.2prot_P-wetherbeei_contig758.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig758 5499..6309 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig758.4.2

>prot_P-wetherbeei_contig758.4.2 ID=prot_P-wetherbeei_contig758.4.2|Name=mRNA_P-wetherbeei_contig758.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp
MFIEWLDRSAYLLRLSTSRPMSLHALAHLARRDRAEQLRRAPQSVSALLG
GIEPAGAVAATTTSGAASDGGRRGGGGRSGESDGSGGGESGGGESGGGGR
AVLYWLDSLGALQRVPYGAHGHASRFALSLLDKRYRPDMTEGEAVAVVRD
SVAQLGQRYLINSGRFQIRVVDRNGCRDVGGC*
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mRNA from alignment at P-wetherbeei_contig758:4475..6608-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig758.4.2 ID=mRNA_P-wetherbeei_contig758.4.2|Name=mRNA_P-wetherbeei_contig758.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2134bp|location=Sequence derived from alignment at P-wetherbeei_contig758:4475..6608- (Phaeothamnion wetherbeei SAG_119_79)
AACACGCTGATCGGCATTCAGTGCAATGATTTCGTTCTTATGGCAGCCGA
CCGTGGCTTCTTTAGATCCATCGTCGTCATGAACGAGGCAAGCACGTGTC
TATCGTTCCGCAACACGAAACCCTTTTGCTCTCTCCTCCCTCCTGCACTG
TGCGCATTGTTTCCCGCCGGTATGCTGGATAGACACCGAGGGCTTCTTTT
TGTCTAGTACACCCACATTGTTTGCAGGATTACGATAAAATATCAGAGCT
CGGGGAGCGCACTCTCATCGCCACATCGGGCGACCAAGGAGACGTTGCCA
TGTTCATCGAGTGGTTGGATGTAAGAGCGTTCATACATTCGTTGTGGTGC
AGTCCTGCAAGGCAAATATCCATTTTCAGGTCGGACCTTCAGGGGAATAC
GTTTGTTGTCCTTCCTCGTCGCTGCACGCGACCATCTTTTCGAAACTGCA
CACGAGGCTCTCGCCAAGCTTGTCGTTTCTGTCGCACTAAAACTTGCTGT
CACTCGCGTCCCCAATCCCTGTACTGCCCCCGCAAACCGCCAAAAATGGC
CTCTTTCTTCTCCTTCCACTTGTCCGTTGCAGCGCTCGGCCTACCTCCTG
CGGCTGTCGACGTCGCGCCCGATGAGCCTCCACGCGCTCGCCCACCTCGC
CCGTCGCGACCGCGCCGAGCAGCTCCGCCGCGCGCCGCAGTCCGTCAGCG
CCCTTCTCGGCGGCATCGAACCCGCCGGAGCAGTGGCGGCGACAACAACG
TCCGGCGCTGCTTCCGACGGCGGCCGACGCGGCGGCGGCGGCAGAAGCGG
CGAAAGCGACGGTAGCGGCGGAGGGGAAAGCGGCGGCGGGGAAAGTGGCG
GCGGCGGGCGGGCGGTGCTCTACTGGTTGGACAGCCTTGGGGCGCTGCAG
CGGGTGCCGTACGGCGCGCACGGCCACGCGTCGCGCTTCGCGCTCTCGCT
ACTCGACAAGCGCTATCGCCCGGACATGACCGAGGGGGAGGCCGTGGCGG
TGGTGCGCGACAGTGTTGCCCAGCTCGGGCAACGCTACCTCATCAATTCG
GGGCGTTTCCAGATCCGGGTCGTCGACCGCAACGGCTGCCGGGATGTCGG
CGGCTGCTGAGTGAACGAAGAAAGGCCGGCGTCGGCGGTTGGGCTTCGCT
CGTGACGAACTAGAGGGAGGACGTGCAGCTGAACGCAAGCGATAAGTCCC
GTATTCGACTGCTTGCGGTCGCCCGCTGCTGCCTCCTCGTTGCCCTTCAT
TGCACACCATGACAGCGGCGCTGCCAGTCGCTGTTCTGTTATCACACATC
GGAGGGCCAGCTGCAACCACAACAGCTGCAATCCCGCTGTAGCCAACGCC
AAACTTCGAGCTACGTTCCCATATAGGCTCCGACGGTCGACCTCTTCGTG
TGCGGCGCCGCGCCCCATCTGGCGTCTGCTTGTCCACCACTGGCATCTTT
GGCAAGACATGGCGGCAACGTGCTCCAGTCTAGCATCCGGTCTATCAATG
ACGAAAGCTGTGGCTGGTGGCGCATTCGACTCACGCGGCGAAACGCGTGC
AAATTTCTGCAGTGCTGCACTGCCCAGTGCCAATCACCCCGCAGGCCCGG
TATTGGAGTGACGCTGCACACTTTGCGTTCCCAGCACGGTTGAAGCGCGC
GATTGCCGTAATGACGGCACTCGTGGAAGCAACCGCCAGCGGCGGCGGCG
TAGCGATGGCGGCGGCGGCGATGGTAGTGTCTGTAGCGGCGGCGAACGTT
GCAATGGTGCAAGGGCAGCGACAGCTGCTACACAGGATCCCGATCTCCTT
CAGAGGAAGCGGCGGCGGCGGCGGCACGTTCCTCGTCATATGATCCAGCA
GCTCTTGCCGCTGTTCCTGCTAGGTGGCCGGCCGGCAGGAGGAGGAAACA
CAAAATGAAACGAGGCAGCAGCATGTCTCCAATCGCACGGCGCCTGCCGC
TGCCCTGCACCTTGCGAGCGCGGCTCGCGATGCGGCGACGTCATGTTTGG
TGCGAATTTAATACTATAGCGCTCGAAATGTTCTGCGCCGCACTTACGGC
CTGCAGAAGTGGGACGCGCCTACTGGAGAAGACGAGCCGGTGATTCCAGT
TATCATCGTGACAACCAAGAGTTCACTACAAGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig758:4475..6608-

>mRNA_P-wetherbeei_contig758.4.2 ID=mRNA_P-wetherbeei_contig758.4.2|Name=mRNA_P-wetherbeei_contig758.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig758:4475..6608- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCATCGAGTGGTTGGATCGCTCGGCCTACCTCCTGCGGCTGTCGAC
GTCGCGCCCGATGAGCCTCCACGCGCTCGCCCACCTCGCCCGTCGCGACC
GCGCCGAGCAGCTCCGCCGCGCGCCGCAGTCCGTCAGCGCCCTTCTCGGC
GGCATCGAACCCGCCGGAGCAGTGGCGGCGACAACAACGTCCGGCGCTGC
TTCCGACGGCGGCCGACGCGGCGGCGGCGGCAGAAGCGGCGAAAGCGACG
GTAGCGGCGGAGGGGAAAGCGGCGGCGGGGAAAGTGGCGGCGGCGGGCGG
GCGGTGCTCTACTGGTTGGACAGCCTTGGGGCGCTGCAGCGGGTGCCGTA
CGGCGCGCACGGCCACGCGTCGCGCTTCGCGCTCTCGCTACTCGACAAGC
GCTATCGCCCGGACATGACCGAGGGGGAGGCCGTGGCGGTGGTGCGCGAC
AGTGTTGCCCAGCTCGGGCAACGCTACCTCATCAATTCGGGGCGTTTCCA
GATCCGGGTCGTCGACCGCAACGGCTGCCGGGATGTCGGCGGCTGCTGA
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