mRNA_P-wetherbeei_contig7568.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7568.1.2
Unique NamemRNA_P-wetherbeei_contig7568.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: A0A6H5JHZ0_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ0_9PHAE)

HSP 1 Score: 509 bits (1312), Expect = 2.760e-175
Identity = 258/427 (60.42%), Postives = 310/427 (72.60%), Query Frame = 1
Query:   52 MYAELESIRERQKRDDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTESGRWRAEVTAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRDMLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIAFFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFFQGVN--LRELC 1326
            MY +L  +R+ Q   DAA   G        G+N    R R+IL SR+LPYKL MT SGRW  E+   DQAL++++VVHD  +C+WVGWPGT VEPG + +L D L++ R++P+FLD   ED+FY GFCKTILWPLFHSSMPTTEDTIA    DAD                 +E+  E+ LW AY+A NQ+FAD IQD+YRDGDLIWVHDYHL MLPQMLR +LP AKI FFLHLPFPSSEIYRILP+R  +LEGILS+D+VGFQTYDYARHFLSTVESLLDA CSP+ V +NGH ANV ICPVGIDPD  T +   P+V  LM+RWSK+   K++LLGVD++DAT+GLV KFLA+EEM   +  LA  V FVQVCF G  +RE + LLE+Q+ G V R+NSKL S+ E GPVQFF  VN  L+ LC
Sbjct:    1 MYKKLAKVRDEQ---DAARPGGQ------DGANGATGRPRIILVSRRLPYKLQMTPSGRWTTEIPKADQALQSYRVVHDLMECIWVGWPGTYVEPGRECSLTDQLKDRRLVPIFLDAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIAC--HDADSI---------------EEQREERQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSAKIGFFLHLPFPSSEIYRILPYREQILEGILSSDIVGFQTYDYARHFLSTVESLLDANCSPQGVEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKSMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRE-HMLLEAQVQGFVARVNSKLGSIDEVGPVQFFLNVNPELKALC 400          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: D7G2K2_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K2_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 1.580e-161
Identity = 268/523 (51.24%), Postives = 329/523 (62.91%), Query Frame = 1
Query:   22 EAALLVRISQMYAELESIRERQKRDDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTESGRWRAEVTAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRDMLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIAFFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFFQGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAVRMDRDERTIRHDNMLS 1590
            E ALL +IS+MY EL  +R+ Q   DAA   G        G+N    R R+IL SR+LPYKL MT SGRW  E+   DQAL++++VVHD  +C+WVGWPGT VEPG + +L D L++ R++P+FLD   ED+FY GFCKTILWPLFHSSMPTTEDTIA    DAD                 +E+  E  LW AY+A NQ+FAD IQD+YRDGDLIWVHDYHL MLPQMLR +LP                                                                V +NGH ANV ICPVGIDPD  T +   P+V  LM+RWSK+   KT+LLGVD++DAT+GLV KFLA+EEM   +  LA  V FVQVCF G  +RE   +LE+Q+ G V R+NSKL S+ EAGPVQFF  VN  EL ALY +ADVL++TPIRDGM++VPFEYVVSRE +   A+VVLSEFAGCARS+GGAVL+NPW+T +  E+M+ A+ M+ +ER IR   M S
Sbjct:  259 EDALLEQISRMYEELAKVRDEQ---DAARPGGQ------DGANGATGRPRIILVSRRLPYKLQMTSSGRWTTEIPKADQALQSYRVVHDLMECIWVGWPGTYVEPGRECSLTDQLKDRRLVPIFLDAAMEDRFYEGFCKTILWPLFHSSMPTTEDTIAC--HDADSI---------------EEQREESQLWLAYKAANQSFADTIQDVYRDGDLIWVHDYHLTMLPQMLRNVLPSG--------------------------------------------------------------VEHNGHFANVTICPVGIDPDAVTQLCHQPDVMRLMQRWSKQTRNKTMLLGVDSLDATRGLVQKFLAVEEMFEMQPGLADKVNFVQVCFTGPHSRERM-VLEAQVQGFVARVNSKLGSIDEAGPVQFFLNVNPNELSALYAIADVLVITPIRDGMDVVPFEYVVSRECRRLPATVVLSEFAGCARSIGGAVLINPWNTTEFTEQMIGAINMEENEREIRQSFMYS 692          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: A0A7S1UL28_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UL28_9STRA)

HSP 1 Score: 484 bits (1245), Expect = 2.610e-159
Identity = 263/570 (46.14%), Postives = 348/570 (61.05%), Query Frame = 1
Query:   28 ALLVRISQMYAELESIRERQKRDDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTESGRWRAEVTA----MDQALENFKVVHDRFD-CVWVGWPGTDVEPGHQMALRDMLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIAFFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGN---------------------RELYTLLESQLHGIVERINSKLASVAEAGPVQFFQGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAV-RMDRDERTIRHDNMLSYVRNFTSTSWCERMVEQLEDAN 1656
            +++  I ++Y +LE++R+R+   +    E    S+  P  +   D+ R++LASR+LP++L    +      V+      DQ + N + V        WVGWP   V+P  Q  L + L      PV++D  ++ +FY GFCKT+LWPLFHS  PTTEDTIA SR +                  P  ++ E  +WQAY  VNQ FADAI+D+Y DGDLIWVHDYHL+++PQMLRALLP AKI FFLH+ FPSSE+YRILP+R  +L GILS+DLVGFQTY YAR+F  T ES+L  + SP  V   GH ANV I P+GI P  +    R+  V  LM+R+ ++F+GK V+LGVD++D TKGLVHK LAIEE L+    L +SVVFVQV    +G                            LE+ +  +  RINS+  S+   GP+     V   EL ALY +AD LL+TPIRDGMN+VPF+YVV+R A   LASVVLSEF GCARSLGGA+LVNPW+T ++A  +   +  ++ +ER   HD M+ YV  FTS  W ER +EQL +AN
Sbjct:   10 SIISEIEKLYKQLETVRDRRAHSEVGRDES---SNDRPRRD--SDKPRILLASRKLPFELRRAAAANNWTGVSPGDQETDQIIANLQAVFGNGRRAKWVGWPRCAVDPTDQAVLTEQLTRRSFFPVWIDETRQIQFYEGFCKTLLWPLFHSLPPTTEDTIAISRSEH---IWNAAQATVDAPPHPAAQYDESAMWQAYVHVNQLFADAIRDVYEDGDLIWVHDYHLMLVPQMLRALLPHAKIGFFLHIAFPSSELYRILPYREEILRGILSSDLVGFQTYQYARYFFQTCESILGLDWSPVAVEDAGHYANVCIIPIGIQPRVYAQRCRTRPVDTLMQRYQRQFAGKKVILGVDSLDVTKGLVHKLLAIEEFLNTREDLVESVVFVQVALNATGGGAHAAATGVVVDPAVDAVASASASVASLEAHIARMAARINSQHCSLGSEGPLHLISHVTAEELMALYSVADTLLITPIRDGMNVVPFQYVVARHAARRLASVVLSEFTGCARSLGGALLVNPWNTQELAAALHHLLFDLEPEERQRNHDAMIQYVERFTSERWSERFLEQLAEAN 571          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: A0A0W8D9Y2_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9Y2_PHYNI)

HSP 1 Score: 457 bits (1177), Expect = 7.880e-150
Identity = 244/559 (43.65%), Postives = 353/559 (63.15%), Query Frame = 1
Query:   13 QDAEAALLVRISQMYAELESIRERQKR--DDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTES-GRWRAEV---TAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRD-MLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIA--FFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFF-QGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAVRMDRDERTIRHDNMLSYVRNFTSTSWCERMVEQLEDANE 1659
            ++ E ALL  +S +Y +L  +RE++ +   ++   +       + GS     RRR++L +R LP+ L   ++  +WRAE     +++ A+E F+ +H+ +DCVW+G    ++EP  Q  L++ +L++ +  PVFLD  +E  +Y GFCKT++WPLFHS  PTT+D I +                       DER  E++ WQAY A NQ FADA+Q++Y +GDL+W+  YHL ++PQM++ L P   I   FF+H+PFPS+E+YRIL  R  +L G+L ADL+GFQTY+YARHF S    LL  E S K V +NGH A V ICPVGID + +  M +S  V+  M++   +FS K V+LGVD +D TKGLVHK LA+EE+ + +  LA+ VVF+Q+    +G     + LESQ+  +V RINSKL  +   GPVQ+  + + +  L ALY LAD L++TP+RDGMN VPF Y+V REA    A V+LSEFAGCA+SLGGA LVNPW+T ++ + +  +++ D DE    H +M SYV +FTS  W +  +EQL + +E
Sbjct:    8 KEREGALLRELSALYTKLNQVREKRVKAEQESGDNDHDTDDEGVKGSRR---RRRVLLVTRTLPFWLVSEDAQSQWRAEFPEHASLNGAMEIFQSLHENYDCVWIGSVHGEIEPSEQNTLKEQLLQDRKYYPVFLDEKRERLYYQGFCKTVMWPLFHSCPPTTDDQITQHET--------------MEGGQEDERSMEKM-WQAYVATNQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNDNICLGFFMHIPFPSAELYRILNNREEILTGMLGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDAEKYIAMVQSDAVQEQMKQLEGQFSDKKVILGVDQLDQTKGLVHKLLAVEELFTHKPELAKEVVFLQIV---TGASVYESALESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALADALVITPVRDGMNTVPFGYIVCREATDKHARVILSEFAGCAQSLGGARLVNPWNTEELTDALQESLQ-DNDEVMRAHQHMYSYVSSFTSWHWADNFLEQLHECSE 544          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: W2FY48_PHYPR (Trehalose-phosphatase n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2FY48_PHYPR)

HSP 1 Score: 458 bits (1179), Expect = 1.030e-148
Identity = 244/559 (43.65%), Postives = 353/559 (63.15%), Query Frame = 1
Query:   13 QDAEAALLVRISQMYAELESIRERQKR--DDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTES-GRWRAEV---TAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRD-MLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIA--FFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFF-QGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAVRMDRDERTIRHDNMLSYVRNFTSTSWCERMVEQLEDANE 1659
            ++ E ALL  +S +Y +L  +RE++ +   ++   +       + GS     RRR++L +R LP+ L   ++  +WRAE     +++ A+E F+ +H+ +DCVW+G    ++EP  Q  L++ +L++ +  PVFLD  +E  +Y GFCKT++WPLFHS  PTT+D I +                       DER  E++ WQAY A NQ FADA+Q++Y +GDL+W+  YHL ++PQM++ L P   I   FF+H+PFPS+E+YRIL  R  +L G+L ADL+GFQTY+YARHF S    LL  E S K V +NGH A V ICPVGID + +  M +S  V+  M++   +FS K V+LGVD +D TKGLVHK LA+EE+ + +  LA+ VVF+Q+    +G     + LESQ+  +V RINSKL  +   GPVQ+  + + +  L ALY LAD L++TP+RDGMN VPF Y+V REA    A V+LSEFAGCA+SLGGA LVNPW+T ++ + +  +++ D DE    H +M SYV +FTS  W +  +EQL + +E
Sbjct:    8 KEREGALLRELSALYTKLNQVREKRVKAEQESGDNDHDTDDEGVKGSRR---RRRVLLVTRTLPFWLVSEDAQSQWRAEFPEHASLNGAMEIFQSLHENYDCVWIGSVHGEIEPSEQNTLKEQLLQDRKYYPVFLDEKRERLYYQGFCKTVMWPLFHSCPPTTDDQITQHET--------------MEGGQEDERSMEKM-WQAYVATNQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNDNICLGFFMHIPFPSAELYRILNNREEILTGMLGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDAEKYIAMVQSDAVQEQMKQLEGQFSDKKVILGVDQLDQTKGLVHKLLAVEELFTHKPELAKEVVFLQIV---TGASVYESALESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALADALVITPVRDGMNTVPFGYIVCREATDKHARVILSEFAGCAQSLGGARLVNPWNTEELTDALQESLQ-DNDEVMCAHQHMYSYVSSFTSWHWADNFLEQLHECSE 544          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: A0A329SM09_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329SM09_9STRA)

HSP 1 Score: 467 bits (1201), Expect = 1.880e-148
Identity = 249/559 (44.54%), Postives = 356/559 (63.69%), Query Frame = 1
Query:   13 QDAEAALLVRISQMYAELESIRERQKR--DDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTES-GRWRAEV---TAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRD-MLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIA--FFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFF-QGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAVRMDRDERTIRHDNMLSYVRNFTSTSWCERMVEQLEDANE 1659
            ++ EAALL  +S +Y +L  +RE++ +   ++   +  A    + GS     RRR++L +R LP+ L   ++  +WRAE     +++ A+E F+ +H+ +DCVW+G    ++EP  Q  L++ +L++ +  PVFLD+ +E  +Y GFCKT++WPLFHS  PTT+D I +                       DER  E++ WQAY A NQ FADA+Q++Y +GDL+W+  YHL ++PQM++ L P   I   FF+H+PFPS+E+YRIL  R  +L G+L ADL+GFQTY+YARHF S    LL  E S K V +NGH A V ICPVGID D +  M +S  V+  M +   +FSGK V+LGVD +D TKGLVHK LA+EE+ + +  LA+ VVF+Q+    +G     + LESQ+  +V RINSKL  +   GPVQ+  + + +  L ALY LAD L++TP+RDGMN VPF Y+V REA    A V+LSEFAGCA+SLGGA LVNPW+T ++ E +  +++ D DE    H +M SYV +FTS  W +  +EQL + +E
Sbjct:    8 KEREAALLRELSALYTKLNQVREKRVKAEQESGDNDHDADDEGVKGSRR---RRRVLLVTRTLPFWLVSEDAQSQWRAEFPEHASLNGAMEIFQSLHENYDCVWIGSVHGEIEPSEQNTLKEQLLQDRKYYPVFLDQKRERLYYQGFCKTVMWPLFHSCPPTTDDQITQHET--------------MEGGQEDERSMEKM-WQAYVATNQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNDNICLGFFMHIPFPSAELYRILNNREEILTGMLGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDADKYIAMVQSDAVQEQMRQLESQFSGKKVILGVDQLDQTKGLVHKLLAVEELFTHKPELAKEVVFLQIV---TGASVYESALESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALADALVITPVRDGMNTVPFGYIVCREATDKHARVILSEFAGCAQSLGGARLVNPWNTEELTEALQESLQ-DNDEVMRAHQHMYSYVSSFTSWHWADNFLEQLHECSE 544          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: A0A836CRD5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRD5_9STRA)

HSP 1 Score: 477 bits (1228), Expect = 1.010e-147
Identity = 333/934 (35.65%), Postives = 420/934 (44.97%), Query Frame = 1
Query:   16 DAEAALLVRISQMYAELESIRERQKRDDAASREGHALSS-----AIPGSNPLGDRRRLILASRQLPYKLAMTESGRWRAEVTAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRDMLREHRMIPVFLD----------------RDKEDKFYGGFCKTILWPLFHSSMPTTEDTIAR----SREDA--------------------------------------------------------------------DDAXXXXXXXXXXXXXX------PD-------------------------------------------------------------------------------------------------------------------------------------------------ERHGEQLLW--------------------------------------QAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQML----------------RALLPGAKIAFFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMER----------------WSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRG------SGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFFQGVNLR------------------------------------ELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTND---------------------VAEKMLWAVRMDRDERTIRHDNMLSYVRNFTSTS---------WCERMVEQLEDANE 1659
            + EA LL RIS  Y  L ++++++ + +A       LSS     A   +   G+R  +IL SR+LPY++ +TE G WRAE+TAM+QAL+N + VH+R+  +WVG PG  V+PGHQMA RD LRE+R+ P+F D                  +E++FYGG+C+TILWPL H S+PTTED IA     SRED                                                                     DDA                    PD                                                                                                                                                 +R    + W                                      +AY+AVNQ FADAIQ++YRDGD++WVHDYHL++LPQML                RALLP AKI+FFLH+PFPSSEIYRILP R  +LEG+L +DL+GFQTYDYARHFLSTVESLLDA+CS + V YNGH A+ AICPVGIDP+ +  +AR PEV  + +R                W+++  G+ VLLGVD +DATKGLVHKFLA+EEM  RE  LA+SV F+QVC  G      +G+R++   L +Q+HG V RINSKLA++ E GPV+FF  VNL+                                    ELCALYCLADVL++TPIRDGMNI PFEYVVSREA G LA+VVLSEFAGCARSLGGA+LVNPW T+                      VA+ ++ A+ M+ DER  RH NM SYV +FTS           W  R + QL   NE
Sbjct:   28 ETEAQLLERISAEYVRLRTVQQQRAQVEAVLGGELGLSSLGLTGAAAAAAQQGER--IILVSRRLPYQVRLTERGGWRAEMTAMNQALQNLRAVHERYGGLWVGLPGVQVDPGHQMATRDRLREYRLSPIFADPVTGPRARVASADPSLMVREEQFYGGYCRTILWPLLHYSLPTTEDMIAANEVYSREDEKGEQDMWQQGDPLGPLYFAVAAAFLLFYPDGVNATPGSMPAYGHSTAEPPAPHCAFLDDLNVLQAAYFDDAAAAGVAEVIRRLAAGGLRVRPDKSLAIAMRGTVFDEAARARLRALDIPFVDTTMPESSQGFTSVGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEAYADEICRKDCLVEDLEAASAGAVGKPTQAAPIGDSRDTSRRRQQASARVLAQLRSQRASGAMAWMSVPPTANDRPGAAPMSSMAAATMILIAIFIDGWGIQGEAYKAVNQQFADAIQEIYRDGDMVWVHDYHLMLLPQMLTIXXXXXXXXXXXXXXRALLPSAKISFFLHVPFPSSEIYRILPNREQILEGLLGSDLLGFQTYDYARHFLSTVESLLDADCSRQGVEYNGHFASAAICPVGIDPEQWVQLARRPEVESVRQRSACKLSXXXXXXXXXXWARQLDGRRVLLGVDGLDATKGLVHKFLAVEEMFDREPRLAESVSFIQVCMGGGAHSRVAGDRQV---LAAQIHGFVGRINSKLANLDEEGPVKFFLDVNLQFFVETSLQANVQLWKGRAMGLGLTGSXXXXXXXXXQELCALYCLADVLVITPIRDGMNISPFEYVVSREAHGALATVVLSEFAGCARSLGGALLVNPWATSXXXXXXXXXXXXXXXXXXXXXXVAKALMQAMDMEEDERAKRHSNMSSYVWDFTSDGXXXXXXXXXWSTRSMRQLVKGNE 956          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: H3GTK8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTK8_PHYRM)

HSP 1 Score: 463 bits (1191), Expect = 1.550e-147
Identity = 250/558 (44.80%), Postives = 354/558 (63.44%), Query Frame = 1
Query:   13 QDAEAALLVRISQMYAELESIRERQ-KRDDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTES-GRWRAEV---TAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRD-MLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIA--FFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFF-QGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAVRMDRDERTIRHDNMLSYVRNFTSTSWCERMVEQLEDANE 1659
            Q+ EAALL  +S +Y +L  +RE++ K +  +  + H       GS     RRR++L +R LP+ L   ++  +WRAE     +++ A+E F+ +H+ +DCVW+G    ++EP  Q  L++ +L++ +  PVFLD  +E  +Y GFCKT++WPLFHS  PTT+D I +                       DER  E++ WQAY A NQ FADA+Q++Y +GDL+WV  YHL ++PQM++ L P   +   FF+H+PFPS+E+YRIL  R  +L GIL ADL+GFQTY+YARHF S    LL  E S K V +NGH A V ICPVGID D +  M +S  V+  M +   +F+GK V+LGVD +D TKGLVHK LA+EE+ + +  LA+ VVF+Q+    +G     ++LESQ+  +V RINSKL  +   GPVQ+  + + +  L ALY LA VL+ TP+RDGMN +PF YVV REA    A V+LSEFAGCA+SLGGA LVNPW+T ++ + +  +++ D DE    H +M SYV +FTS  W +  +EQL + +E
Sbjct:    8 QEREAALLRELSALYTKLNQVREKRVKAEQESGADAHEADDK--GSRR---RRRVLLVTRTLPFWLVSEDAQSQWRAEFPEHASLNGAMEIFQSLHESYDCVWIGSVHGEIEPSEQNTLKEQLLQDRKYYPVFLDEKREKLYYQGFCKTVMWPLFHSCPPTTDDQIIQHE--------------MMEGGQEDERSMEKM-WQAYVAANQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNVCLGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDADKYIAMVQSDPVQEQMRQLESQFAGKKVILGVDQLDQTKGLVHKLLAVEELFTVKPELAKEVVFLQIV---TGTTVFESVLESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALAHVLVTTPVRDGMNTIPFGYVVCREATNRHARVILSEFAGCAQSLGGARLVNPWNTEELTDALQESLQ-DSDEVMRAHQHMYSYVSSFTSWHWADNFLEQLHECSE 541          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: A0A6A3MPS8_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPS8_9STRA)

HSP 1 Score: 460 bits (1184), Expect = 1.180e-145
Identity = 249/563 (44.23%), Postives = 351/563 (62.34%), Query Frame = 1
Query:   13 QDAEAALLVRISQMYAELESIRERQKRDDAASREGHALSSAIPGSNPLGDRR------RLILASRQLPYKLAMTES-GRWRAEV---TAMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRD-MLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIA--FFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFF-QGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAVRMDRDERTIRHDNMLSYVRNFTSTSWCERMVEQLEDANE 1659
            ++ EAALL  +S +YA+L  ++E++                                 R++L +R LP+ L   ++  +WRAE     +++ A+E F+ +H+R+DCVW+G    ++EP  Q  L++ +L+E +  PVFLD  +E  +Y GFCKT++WPLFHS  PTT+D I +                       DER  E++ WQAY A NQ FADA+Q++Y +GDL+W+  YHL ++PQM++ L P   I   FF+H+PFPS+E+YRIL  R  +L GIL ADL+GFQTY+YARHF S    LL  E S K V +NGH A V ICPVGID D +T M +S  V+  M++   +F+GK V+LGVD +D TKGLVHK LA+EE+ +++  LA+ VVF+Q+    +G   L + LESQ+  +V RINSKL  +   GPVQ+  + + +  L ALY LAD L++TP+RDGMN +PF YVV REA    A V+LSEFAGCA+SLGGA LVNPW+T ++ E +  A++ D DE    H +M SYV +FTS  W +  +EQL + +E
Sbjct:    8 KEREAALLRELSALYAKLNQVQEKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLLVTRSLPFWLVSEDAQSQWRAEFPEHASLNGAVEIFQALHERYDCVWIGSVHGEIEPSEQNTLKEQLLQERKYCPVFLDERRERLYYEGFCKTVMWPLFHSCPPTTDDQIVQHE-------------MTEGGGQEDERSMEKM-WQAYVAANQAFADAVQEVYEEGDLVWIQGYHLTLVPQMVQNLFPNDNICLGFFMHIPFPSAELYRILNNREEILTGILGADLIGFQTYEYARHFQSACVRLLGLESSHKGVDFNGHFARVTICPVGIDADKYTAMVQSDAVQEQMKQLEGQFAGKQVILGVDQLDQTKGLVHKLLAVEELFTQKPELAKEVVFLQIV---TGASVLESALESQVESLVSRINSKLQDIGTEGPVQYLNKEIAVEALIALYALADALVITPVRDGMNTIPFGYVVCREAASKHARVILSEFAGCAQSLGGARLVNPWNTEELTEALQDALQ-DNDEVMRAHQHMYSYVSSFTSWHWADNFLEQLHECSE 552          
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Match: A0A5D6YBX0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBX0_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 7.410e-145
Identity = 251/560 (44.82%), Postives = 348/560 (62.14%), Query Frame = 1
Query:   13 QDAEAALLVRISQMYAELESIRERQKRDDAASREGHALSSAIPGSNPLGDRRRLILASRQLPYKLAMTES-GRWRAEVT---AMDQALENFKVVHDRFDCVWVGWPGTDVEPGHQMALRD-MLREHRMIPVFLDRDKEDKFYGGFCKTILWPLFHSSMPTTEDTIARSREDADDAXXXXXXXXXXXXXXPDERHGEQLLWQAYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKI--AFFLHLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDAECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSGKTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNRELYTLLESQLHGIVERINSKLASVAEAGPVQFF---QGVNLRELCALYCLADVLLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNPWDTNDVAEKMLWAVRMDRDERTIR-HDNMLSYVRNFTSTSWCERMVEQLEDANE 1659
            +D EA LL  ++ +Y++L  +RE++ R +  S  G    +   GS   G RRR++L +R LP+ L   ++   WRAE     ++D A+E +  +H+ +DCVW+G    D+EP  Q AL++ +L E +  PVFLD  +E  FY GFCKT++WPLFHS  PTT+D ++    DA                  D+      +WQAY A NQ FADA+Q++Y +GDL+WV  YHL ++PQM++ L P   I   +FLH+PFPSSE++RI+  R  VL G+L A+L+GFQTY+YARHF S    LL  E S K V YNGH A V ICPVGID   +T + R+P V   +   +++F  K VLLGVD +D T+GLVHK LA+EE+ ++  +L+Q VVF+Q+            LL +Q+  +V RINS+L ++   GPVQ+    + ++   L ALY LA  L+ TPIRDGMN +PFEYVV REA+G  A VVLSEFAG A SL GAVLVNPW+T++V + +  A+    D   +R H +M SYVR FTS  W +  +EQL +  E
Sbjct:  274 KDREAGLLRELAALYSKLNQVREKRVRAEEESARG---PNGADGSG--GRRRRVLLVTRTLPFTLVWEDAQSHWRAEFPENMSLDGAMETYLCLHENYDCVWIGSVHGDIEPSEQKALKEQLLEERKYCPVFLDPKRERLFYHGFCKTVMWPLFHSWPPTTDDQLSTHEVDA-------------AAGYGDDGFDMDKMWQAYVATNQAFADAVQEVYEEGDLVWVQGYHLTLVPQMVQNLFPNDNIDVGYFLHVPFPSSELFRIMTHREEVLTGMLGANLLGFQTYEYARHFQSAAVRLLGLESSHKGVEYNGHFARVTICPVGIDAAKYTALMRTPAVLEQVALMTQQFGRKKVLLGVDALDLTRGLVHKLLAVEELFTQHPALSQDVVFLQIVTGAPPPTPDALLLGAQVESLVSRINSRLTAIGADGPVQYLNLTKELSQEALVALYALAHALVTTPIRDGMNTIPFEYVVCREARGQPARVVLSEFAGSAHSLSGAVLVNPWNTDEVLDALRAALLESDDANALRAHQSMFSYVRTFTSRHWADNFLEQLRECGE 815          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7568.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHZ0_9PHAE2.760e-17560.42GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2K2_ECTSI1.580e-16151.24Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
A0A7S1UL28_9STRA2.610e-15946.14Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A0W8D9Y2_PHYNI7.880e-15043.65Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
W2FY48_PHYPR1.030e-14843.65Trehalose-phosphatase n=2 Tax=Phytophthora parasit... [more]
A0A329SM09_9STRA1.880e-14844.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
A0A836CRD5_9STRA1.010e-14735.65Glycosyltransferase family 20-domain-containing pr... [more]
H3GTK8_PHYRM1.550e-14744.80Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3MPS8_9STRA1.180e-14544.23Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
A0A5D6YBX0_9STRA7.410e-14544.82Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7568contigP-wetherbeei_contig7568:515..2783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog42099.EPrPV00000022747
PFAMsGlyco_transf_20,Trehalose_PPase
Model size1659
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.48e-149
EggNOG OGsCOG1877@1|root,KOG1050@2759|Eukaryota,1MCCV@121069|Pythiales
DescriptionAlpha,alpha-trehalose-phosphate synthase UDP-forming . Source PGD
Cds size1659
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186988.9430294-CDS-P-wetherbeei_contig7568:514..8381683186988.9430294-CDS-P-wetherbeei_contig7568:514..838Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7568 515..838 +
1683186988.9549642-CDS-P-wetherbeei_contig7568:1002..17701683186988.9549642-CDS-P-wetherbeei_contig7568:1002..1770Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7568 1003..1770 +
1683186988.965705-CDS-P-wetherbeei_contig7568:1961..20421683186988.965705-CDS-P-wetherbeei_contig7568:1961..2042Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7568 1962..2042 +
1683186988.978936-CDS-P-wetherbeei_contig7568:2297..27831683186988.978936-CDS-P-wetherbeei_contig7568:2297..2783Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7568 2298..2783 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7568.1.2prot_P-wetherbeei_contig7568.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7568 515..2783 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7568.1.2

>prot_P-wetherbeei_contig7568.1.2 ID=prot_P-wetherbeei_contig7568.1.2|Name=mRNA_P-wetherbeei_contig7568.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=553bp
MLDPQDAEAALLVRISQMYAELESIRERQKRDDAASREGHALSSAIPGSN
PLGDRRRLILASRQLPYKLAMTESGRWRAEVTAMDQALENFKVVHDRFDC
VWVGWPGTDVEPGHQMALRDMLREHRMIPVFLDRDKEDKFYGGFCKTILW
PLFHSSMPTTEDTIARSREDADDAAASSGFGGGGGSGGPDERHGEQLLWQ
AYRAVNQTFADAIQDLYRDGDLIWVHDYHLLMLPQMLRALLPGAKIAFFL
HLPFPSSEIYRILPFRTGVLEGILSADLVGFQTYDYARHFLSTVESLLDA
ECSPKCVVYNGHVANVAICPVGIDPDTFTNMARSPEVRVLMERWSKRFSG
KTVLLGVDTIDATKGLVHKFLAIEEMLSREASLAQSVVFVQVCFRGSGNR
ELYTLLESQLHGIVERINSKLASVAEAGPVQFFQGVNLRELCALYCLADV
LLVTPIRDGMNIVPFEYVVSREAQGCLASVVLSEFAGCARSLGGAVLVNP
WDTNDVAEKMLWAVRMDRDERTIRHDNMLSYVRNFTSTSWCERMVEQLED
ANE
back to top

mRNA from alignment at P-wetherbeei_contig7568:515..2783+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7568.1.2 ID=mRNA_P-wetherbeei_contig7568.1.2|Name=mRNA_P-wetherbeei_contig7568.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2269bp|location=Sequence derived from alignment at P-wetherbeei_contig7568:515..2783+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGACCCCCAAGATGCGGAGGCTGCGCTTTTGGTGCGCATCTCTCA AATGTATGCGGAGCTGGAAAGCATCCGAGAGCGACAAAAACGCGACGATG CTGCATCCAGAGAAGGCCACGCGCTTTCATCGGCAATACCTGGAAGCAAT CCGCTCGGCGACAGGCGGCGCCTCATCCTGGCGAGTCGGCAGCTTCCCTA CAAGCTTGCCATGACCGAAAGCGGCCGGTGGAGAGCTGAGGTGACGGCGA TGGACCAAGCGCTGGAGAACTTCAAAGTCGTGCACGACAGATTCGACTGC GTGTGGGTCGGCTGGCCGGGGACAGTGAGTTTCGACGAACCATAAAGAGA AATTGCTCTTTTCACAAGAGTTTAAATCGCATTAATATTCGCAGGAATAG TTCGGTTGTCTTTGGTCCCAGAGTCTGATGATTGTACTCTTCGATGATTG TGCTCTTCGTGCTCTTGTCTACTTTGCGTTTTGGTCAGGACGTGGAGCCG GGGCACCAGATGGCGCTGCGGGACATGCTGCGGGAGCACCGCATGATCCC CGTGTTCCTCGACCGCGACAAGGAGGACAAATTCTACGGCGGTTTTTGCA AAACTATCCTGTGGCCGCTCTTCCACAGCTCCATGCCCACAACGGAAGAC ACTATCGCCCGCTCCCGCGAGGACGCCGACGATGCCGCCGCCTCCAGCGG CTTCGGCGGCGGCGGCGGCAGCGGGGGGCCGGACGAGCGGCACGGGGAGC AGCTGCTGTGGCAAGCGTACCGCGCCGTCAACCAGACCTTTGCCGATGCC ATCCAGGACCTCTACCGGGATGGCGACCTGATCTGGGTGCACGACTACCA CCTGCTGATGCTGCCGCAGATGCTGCGCGCGCTGCTGCCGGGTGCCAAGA TCGCCTTTTTCTTGCATCTTCCCTTCCCGTCCTCGGAGATCTACCGCATC CTGCCCTTCCGCACCGGCGTCCTGGAGGGAATCCTAAGCGCCGATTTGGT CGGCTTCCAGACGTACGATTATGCCCGCCATTTCCTATCGACGGTGGAGT CGCTGCTCGATGCAGAATGCTCCCCGAAGTGTGTTGTCTACAACGGACAC GTTGCCAACGTGGCCATCTGTCCGGTGGGCATCGACCCAGACACGTTTAC GAACATGGCGCGATCGCCGGAGGTGCGTGTGCTCATGGAGCGGTGGTCGA AGCGGTTCAGCGGCAAGACGGTGCTCCTCGGCGTCGACACCATCGACGCT ACGAAGGTGAGGTGGGATGCAGCAAGTTAGTTCAATGGTGATAGGGCAGA AACGGTTTAGCGTTACGTAGAAATTGCCAGAGCAGGCAAAAAAGGCGAAG TTTAGATTGCCCCTTGCCCGATTGAGCCATCTACTTTACTGACACACTTG TTGGAATCGTTTGCTATTTTCTGATTGCTTTCCATTGATACATGCAGGGT CTGGTCCACAAGTTTCTCGCCATCGAAGAGATGCTTAGCAGGGAAGCTTC GCTGGCGCAGAGCGTCGTCTTCGTGCAGGTGAGAGCGGAACGACTAAATC CTATTTCCTGCTGTTGGAGTGCGTTACCCGTCACAGGTCCCGGCTCTAGG ATGTGCGATGCAATGCATGTCAGGCCTAAACACGGAAGAGCGCGGCTTTC ATGTATTCAATGATCCACAGCTGAAAGTTTTTCGTCAAGTGGGAAGGAAT GTTTCCTGGATCATCAACACTTGTGCTTGCTGAAACAGAAGTGAATTGGC TGGAAAGCTATCTATTTTTCGCACCTAAATCAGGTGTGTTTCCGGGGCAG CGGGAACCGGGAGCTCTACACCCTGCTGGAGTCGCAGCTGCACGGCATCG TGGAGCGCATCAACTCCAAGCTGGCCAGCGTGGCCGAGGCCGGGCCCGTC CAGTTCTTCCAGGGCGTCAACCTCCGCGAGCTCTGCGCATTGTACTGCCT CGCCGATGTCCTCCTCGTCACGCCGATCCGCGACGGCATGAACATCGTGC CGTTCGAGTACGTCGTGTCTCGTGAGGCGCAGGGGTGCCTGGCGTCTGTG GTGCTGTCGGAGTTTGCGGGCTGCGCGCGGTCGCTGGGCGGCGCCGTGCT GGTGAACCCCTGGGACACGAACGACGTCGCCGAGAAAATGCTATGGGCGG TGCGGATGGACAGAGACGAGCGGACGATCCGGCACGACAACATGCTGAGC TACGTGCGCAACTTCACGTCGACTAGCTGGTGCGAGCGCATGGTGGAGCA GCTGGAGGACGCCAACGAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7568:515..2783+

>mRNA_P-wetherbeei_contig7568.1.2 ID=mRNA_P-wetherbeei_contig7568.1.2|Name=mRNA_P-wetherbeei_contig7568.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1659bp|location=Sequence derived from alignment at P-wetherbeei_contig7568:515..2783+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGACCCCCAAGATGCGGAGGCTGCGCTTTTGGTGCGCATCTCTCA
AATGTATGCGGAGCTGGAAAGCATCCGAGAGCGACAAAAACGCGACGATG
CTGCATCCAGAGAAGGCCACGCGCTTTCATCGGCAATACCTGGAAGCAAT
CCGCTCGGCGACAGGCGGCGCCTCATCCTGGCGAGTCGGCAGCTTCCCTA
CAAGCTTGCCATGACCGAAAGCGGCCGGTGGAGAGCTGAGGTGACGGCGA
TGGACCAAGCGCTGGAGAACTTCAAAGTCGTGCACGACAGATTCGACTGC
GTGTGGGTCGGCTGGCCGGGGACAGACGTGGAGCCGGGGCACCAGATGGC
GCTGCGGGACATGCTGCGGGAGCACCGCATGATCCCCGTGTTCCTCGACC
GCGACAAGGAGGACAAATTCTACGGCGGTTTTTGCAAAACTATCCTGTGG
CCGCTCTTCCACAGCTCCATGCCCACAACGGAAGACACTATCGCCCGCTC
CCGCGAGGACGCCGACGATGCCGCCGCCTCCAGCGGCTTCGGCGGCGGCG
GCGGCAGCGGGGGGCCGGACGAGCGGCACGGGGAGCAGCTGCTGTGGCAA
GCGTACCGCGCCGTCAACCAGACCTTTGCCGATGCCATCCAGGACCTCTA
CCGGGATGGCGACCTGATCTGGGTGCACGACTACCACCTGCTGATGCTGC
CGCAGATGCTGCGCGCGCTGCTGCCGGGTGCCAAGATCGCCTTTTTCTTG
CATCTTCCCTTCCCGTCCTCGGAGATCTACCGCATCCTGCCCTTCCGCAC
CGGCGTCCTGGAGGGAATCCTAAGCGCCGATTTGGTCGGCTTCCAGACGT
ACGATTATGCCCGCCATTTCCTATCGACGGTGGAGTCGCTGCTCGATGCA
GAATGCTCCCCGAAGTGTGTTGTCTACAACGGACACGTTGCCAACGTGGC
CATCTGTCCGGTGGGCATCGACCCAGACACGTTTACGAACATGGCGCGAT
CGCCGGAGGTGCGTGTGCTCATGGAGCGGTGGTCGAAGCGGTTCAGCGGC
AAGACGGTGCTCCTCGGCGTCGACACCATCGACGCTACGAAGGGTCTGGT
CCACAAGTTTCTCGCCATCGAAGAGATGCTTAGCAGGGAAGCTTCGCTGG
CGCAGAGCGTCGTCTTCGTGCAGGTGTGTTTCCGGGGCAGCGGGAACCGG
GAGCTCTACACCCTGCTGGAGTCGCAGCTGCACGGCATCGTGGAGCGCAT
CAACTCCAAGCTGGCCAGCGTGGCCGAGGCCGGGCCCGTCCAGTTCTTCC
AGGGCGTCAACCTCCGCGAGCTCTGCGCATTGTACTGCCTCGCCGATGTC
CTCCTCGTCACGCCGATCCGCGACGGCATGAACATCGTGCCGTTCGAGTA
CGTCGTGTCTCGTGAGGCGCAGGGGTGCCTGGCGTCTGTGGTGCTGTCGG
AGTTTGCGGGCTGCGCGCGGTCGCTGGGCGGCGCCGTGCTGGTGAACCCC
TGGGACACGAACGACGTCGCCGAGAAAATGCTATGGGCGGTGCGGATGGA
CAGAGACGAGCGGACGATCCGGCACGACAACATGCTGAGCTACGTGCGCA
ACTTCACGTCGACTAGCTGGTGCGAGCGCATGGTGGAGCAGCTGGAGGAC
GCCAACGAG
back to top