mRNA_P-wetherbeei_contig7567.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7567.1.1
Unique NamemRNA_P-wetherbeei_contig7567.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: D7G2Q7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q7_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 6.260e-105
Identity = 147/251 (58.57%), Postives = 195/251 (77.69%), Query Frame = 1
Query:   25 TMADTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLN-GEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKEGHQ 774
            T      LG LFFY++FV+P+C+WILAP RF ++R I YAI  LA IAI K++ E  +RG N+YQ++GVRR ++ +EIKRAY+++SLELHPDKNPS+DAAD F+ ++ A ++LMD E R IYDKLGP+A  ++   +E  +LIEM ++Y++WGVLAY++TLGK    AR W+FTG I+ML +EVA+V   G    LP+WLFP   E+EVVW+LHS+FPAYMNGCRSLGS L+VDVD+QTRD+LL L+ GHQ
Sbjct:    4 TAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQEILMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGSHLFVDVDQQTRDMLLALRAGHQ 254          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A7S0PVN1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PVN1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 3.580e-102
Identity = 142/244 (58.20%), Postives = 188/244 (77.05%), Query Frame = 1
Query:   34 DTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKE 765
            D  GL G FFY+  V+P  +WIL PGRF+R++ I YAI  LAA+A  K   EW  RG N+Y  +GV R + PLEIKRAY+K+SL+LHPDKN S  A+D F  +K+AYDVLMDME+R +Y+K G + +K  KR DET  L+E+ VFY++WG++A++LTLGK +  AR+W FTGL++ML++EVA+ +  + + +PAWL P WTE+EVVW+LHS+FPA+MNGCRSLGSFLYVD+D QTR LLL L+E
Sbjct:    9 DLSGLTGFFFYVFIVHPCTAWILRPGRFERKKSIMYAIAFLAALAAVKTGMEWQQRGPNHYATLGVTRSSNPLEIKRAYRKLSLDLHPDKNQSPTASDDFDAVKQAYDVLMDMEFREVYNKFGKEGIKNNKRFDETQFLLEVGVFYLTWGMMAFMLTLGKKSGEARNWTFTGLLVMLVVEVAL-MTAQQNPIPAWLAPTWTEYEVVWLLHSLFPAFMNGCRSLGSFLYVDLDLQTRQLLLALQE 251          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A6H5K8B0_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B0_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 5.060e-101
Identity = 148/274 (54.01%), Postives = 196/274 (71.53%), Query Frame = 1
Query:   25 TMADTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKL------------SFEWY-----------DRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLN-GEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKEGHQ 774
            T      LG LFFY++FV+P+C+WILAP RF ++R I YAI  LA IAI K+            +  WY           +RG N+YQ++GVRR ++ +EIKRAY+++SLELHPDKNPS+DAAD F+ ++ A +VLMD E R IYDKLGP+A  ++   +E  +LIEM ++Y++WGVLAY++TLGK    AR W+FTG I+ML +EVA+V   G    LP+WLFP   E+EVVW+LHS+FPAYMNGCRSLG+ L+VDVD+QTRD+LL L+ GHQ
Sbjct:    4 TAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMVRDGQRSQTNKKTIGWYRPVAKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQEVLMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGNHLFVDVDQQTRDMLLALRAGHQ 277          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A7S3P2D2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P2D2_9STRA)

HSP 1 Score: 305 bits (780), Expect = 6.890e-100
Identity = 140/244 (57.38%), Postives = 186/244 (76.23%), Query Frame = 1
Query:   34 DTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKE 765
            D  GL G FFY+  V+P  +WIL PGRF+R+R I YAI  LA +A  K   E   RG NYY ++GV R + PLEIKRAYKK+SL+LHPDKNPS  A+D+F  +K+AYDVLMDME+R +Y+K G + +K  KR DET  L+E  +FYVS+G++A++LTLGK +  AR+WIFTGL++ML++EV +++  + +  PAWLFP  TEH+ VW++ ++FPA+MNGCRSLGSFLYVD+D QTR LLL L+E
Sbjct:   11 DFSGLSGFFFYVFIVHPATAWILRPGRFERKRSIMYAIAFLAGLAAIKTGLELQARGPNYYSLLGVNRSSNPLEIKRAYKKLSLQLHPDKNPSPTASDEFDAVKQAYDVLMDMEFREVYNKFGKEGIKNNKRYDETQFLLETAIFYVSYGMMAFMLTLGKKSGEARNWIFTGLLVMLVVEV-VIMTSQTNPFPAWLFPHMTEHDFVWLMKNLFPAFMNGCRSLGSFLYVDLDAQTRHLLLALQE 253          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A7S2V6D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D8_9STRA)

HSP 1 Score: 302 bits (774), Expect = 3.230e-99
Identity = 138/244 (56.56%), Postives = 189/244 (77.46%), Query Frame = 1
Query:   28 MADTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQL 759
            M +  GLG  FFY++FVYP+ +WIL PGRF++++GI YAI  L  IA  K+  +  DRG NYYQ++GV R + PLEIKRAYKK+++ELHPDKNPS +A ++F  +K AYDVLMDME R +Y+K G D +K+ KR DE  +L+E+ +FYV+WG+LAY+LTLGK + TAR+WIFTG I+ML+ EV  +LN +G  +P W  P+ TEHE++ +LH++FP +MNGCR +GS LYVD+D+QTR+LL +L
Sbjct:    1 MGEEGGLGDFFFYVMFVYPVTNWILKPGRFQKKKGIMYAIAFLVVIASIKIGVDVMDRGPNYYQVLGVNRASNPLEIKRAYKKMAVELHPDKNPSPNAEEEFNRLKSAYDVLMDMELREVYNKFGEDGIKSNKRFDEYQMLLEIAIFYVTWGMLAYVLTLGKSSVTARTWIFTGEIVMLVAEVTFMLN-QGE-MPTWFLPFVTEHELILLLHALFPPFMNGCRCIGSALYVDIDQQTRNLLQEL 242          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A7S3Q4I4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q4I4_9STRA)

HSP 1 Score: 302 bits (774), Expect = 4.320e-99
Identity = 138/244 (56.56%), Postives = 187/244 (76.64%), Query Frame = 1
Query:   34 DTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKE 765
            D DGL G FFY+  V+P  +WIL PGRF+R++ I YAIG LAA+A  K       +G N Y+++GV R + PLEIKRAY+K+S+ LHPDKNPS  A+D F  +K+AYDVLMDME+R +Y+K G D + + KR DET   +E+ +FY++WG++AY+LTLGK +  AR W FTGLI+ML+IE++ ++  + + LP+ LFP WTE+E +W+LHS+FPA+MNGCRSLGS+LYVD+DKQTR LLL L+E
Sbjct:    7 DLDGLTGFFFYMFIVHPATAWILRPGRFERKKSIMYAIGFLAALAAIKTGVSMQAKGPNNYKLLGVTRESNPLEIKRAYRKLSVTLHPDKNPSPTASDDFDAVKKAYDVLMDMEFREVYNKFGQDGIDSNKRFDETQFFMELGIFYLTWGMMAYVLTLGKKSGDARQWTFTGLIIMLVIEIS-IMTSQTNPLPSSLFPTWTEYECIWLLHSLFPAFMNGCRSLGSYLYVDLDKQTRQLLLALQE 249          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A1Z5JP57_FISSO (DnaJ homolog subfamily C member 10 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP57_FISSO)

HSP 1 Score: 298 bits (762), Expect = 3.020e-97
Identity = 141/244 (57.79%), Postives = 187/244 (76.64%), Query Frame = 1
Query:   34 DTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKE 765
            D  GL G FFY+  V+P+ +WIL PGRF+R++ I YAI  LA +A  K   E   RG NYYQ +G+ R ++PLEIKRAYKK+SL+LHPDKNPS DA  QF  +K+AYDVLMDME R +Y+K G + ++  KR  ET  L+E+ VFYVS+GV+A+LLT+GK +  AR+W FTGL+ ML++EVA V++ +G+ LP +LFP  TE E+VW+LHS+FPA+MNGCRSLG++L+VD+D QTR LLL L+E
Sbjct:   13 DMSGLTGFFFYMFIVHPITAWILRPGRFERKKSIMYAILFLAGLAAIKTGLEVQQRGPNYYQKLGITRSSSPLEIKRAYKKLSLQLHPDKNPSPDAPAQFDAVKQAYDVLMDMELREVYNKFGHEGIQQNKRYSETQFLLEIAVFYVSYGVMAFLLTMGKKSGEARNWTFTGLLAMLVLEVA-VMSSQGNPLPEYLFPTLTECEIVWLLHSLFPAFMNGCRSLGAYLFVDLDAQTRQLLLALQE 255          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A1E7FEZ0_9STRA (DnaJ-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEZ0_9STRA)

HSP 1 Score: 297 bits (760), Expect = 7.580e-97
Identity = 137/244 (56.15%), Postives = 183/244 (75.00%), Query Frame = 1
Query:   34 DTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKE 765
            D  GLGG FFY+  V+P+ +WIL PGRF+R++ I YAI  LAA+A  K   E   +G NYYQ++ V R + PLEIKRAYKK+ L+LHPDKNPS DAAD+F  +K+AYD+LMD+E R +Y+K G + V+  KR  ET  LIE+ +FYVSW V+A+LLT+GK +  AR W+FTGLI+ML++EV +V+  + + +P WL P  TE ++V ++HS+FPA+MNGCRSLGSFL+VDVD Q R  LL L+E
Sbjct:   11 DFSGLGGFFFYVFLVHPITAWILRPGRFERKKSIMYAIAFLAALAAVKTGLEIQQQGPNYYQILDVTRESNPLEIKRAYKKLGLKLHPDKNPSPDAADEFDRVKQAYDILMDLELRDVYNKFGKEGVRDNKRYSETQFLIEVAIFYVSWAVMAFLLTMGKKSGQARDWVFTGLIVMLVVEV-VVMTSQDNPIPTWLLPTVTERDIVRIMHSLFPAFMNGCRSLGSFLFVDVDAQLRQFLLALQE 253          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A6U1ZV61_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZV61_TRICV)

HSP 1 Score: 297 bits (760), Expect = 8.600e-97
Identity = 135/249 (54.22%), Postives = 185/249 (74.30%), Query Frame = 1
Query:   19 EPTMADTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKE 765
            E    D  GL G FFY+  V+P  +WIL PGRF++++ I YAIG LAA+A  K   E   RG N+YQ++GV R + PLEIKRAYKK+SL+LHPDKN + DA+++F  +K++YDVLMDME R +Y+K GP+ + + KR DET   IE+ VFY++WG++ ++LTLGK +  AR W FTG+I+ML+ E+A ++    + LP  LFP  TEHEVVW++HS+FPA+MNGCRSLG+FL++D+D Q R LLL L+E
Sbjct:    5 EAAADDLSGLSGFFFYVFIVHPATAWILRPGRFEKKKSIMYAIGFLAALASIKTGLEMQARGPNHYQLLGVTRASNPLEIKRAYKKLSLQLHPDKNTAPDASERFDEVKKSYDVLMDMELREVYNKFGPEGIASNKRFDETQFFIELGVFYITWGMMVFVLTLGKKSGDARQWCFTGMIVMLVCEIA-IMTARNNPLPKELFPTSTEHEVVWLMHSLFPAFMNGCRSLGAFLFIDLDAQARQLLLALQE 252          
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Match: A0A4D9D5F1_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5F1_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.070e-96
Identity = 139/241 (57.68%), Postives = 184/241 (76.35%), Query Frame = 1
Query:   40 DGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAKLSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAADQFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVSWGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFPWWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLK 762
            DGL   FFYILFVYPL SW L PGRF R+RG+TYAI  LA +A+ K   E+ DRG N+Y  + + R +TPLEIK+AYKK+SLELHPDKN S  AA++FA +KEAYD LMD E R +Y+K G + +K  +R DET +L+E+ VFYV+WG+LA++LTLGK ++TAR+WI+TG I MLI E++++L  + + LP+WL P WTEHE V+++ S+FPA+MNGCR L  FLYVDVD+Q R  +  L+
Sbjct:    6 DGLVSFFFYILFVYPLTSWFLKPGRFPRKRGLTYAISFLAILALGKTYLEFQDRGPNHYNELHITRASTPLEIKKAYKKMSLELHPDKNKSPTAAEEFARVKEAYDTLMDPELREVYNKFGAEGIKQNRRFDETQLLLEIAVFYVTWGMLAFVLTLGKASSTARNWIYTGQIAMLIAEISLML--QETKLPSWLLPMWTEHEFVFLMRSLFPAFMNGCRCLCGFLYVDVDEQARQKMEHLE 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7567.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q7_ECTSI6.260e-10558.57Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A7S0PVN1_9STRA3.580e-10258.20Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A6H5K8B0_9PHAE5.060e-10154.01HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A7S3P2D2_9STRA6.890e-10057.38Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2V6D8_9STRA3.230e-9956.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3Q4I4_9STRA4.320e-9956.56Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5JP57_FISSO3.020e-9757.79DnaJ homolog subfamily C member 10 n=2 Tax=Fistuli... [more]
A0A1E7FEZ0_9STRA7.580e-9756.15DnaJ-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A6U1ZV61_TRICV8.600e-9754.22Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A4D9D5F1_9STRA1.070e-9657.68J domain-containing protein n=2 Tax=Monodopsidacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7567contigP-wetherbeei_contig7567:288..2833 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2Q7
PFAMsDnaJ
Model size801
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons4
Evalue4.18e-105
EggNOG OGsCOG0484@1|root,KOG0712@2759|Eukaryota
Ec32 ortholog descriptionDnaJ domain protein
Ec32 orthologEc-11_003130.1
Descriptionheat shock protein binding
Cds size774
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186988.8554611-UTR-P-wetherbeei_contig7567:287..3141683186988.8554611-UTR-P-wetherbeei_contig7567:287..314Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7567 288..314 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186988.867811-CDS-P-wetherbeei_contig7567:314..5901683186988.867811-CDS-P-wetherbeei_contig7567:314..590Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7567 315..590 +
1683186988.886811-CDS-P-wetherbeei_contig7567:850..9041683186988.886811-CDS-P-wetherbeei_contig7567:850..904Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7567 851..904 +
1683186988.9024668-CDS-P-wetherbeei_contig7567:1867..20831683186988.9024668-CDS-P-wetherbeei_contig7567:1867..2083Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7567 1868..2083 +
1683186988.9132593-CDS-P-wetherbeei_contig7567:2605..28331683186988.9132593-CDS-P-wetherbeei_contig7567:2605..2833Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7567 2606..2833 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7567.1.1prot_P-wetherbeei_contig7567.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7567 315..2833 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7567.1.1

>prot_P-wetherbeei_contig7567.1.1 ID=prot_P-wetherbeei_contig7567.1.1|Name=mRNA_P-wetherbeei_contig7567.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp
MADTDGLGGLFFYILFVYPLCSWILAPGRFKRERGITYAIGVLAAIAIAK
LSFEWYDRGANYYQMMGVRRYATPLEIKRAYKKISLELHPDKNPSEDAAD
QFAHMKEAYDVLMDMEYRPIYDKLGPDAVKARKRLDETAILIEMLVFYVS
WGVLAYLLTLGKGAATARSWIFTGLILMLIIEVAMVLNGEGSALPAWLFP
WWTEHEVVWMLHSVFPAYMNGCRSLGSFLYVDVDKQTRDLLLQLKEGHQV
GARFGFG*
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mRNA from alignment at P-wetherbeei_contig7567:288..2833+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7567.1.1 ID=mRNA_P-wetherbeei_contig7567.1.1|Name=mRNA_P-wetherbeei_contig7567.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2546bp|location=Sequence derived from alignment at P-wetherbeei_contig7567:288..2833+ (Phaeothamnion wetherbeei SAG_119_79)
CGTGGAGGCTTCAAAGGAGAGCCCACGATGGCGGACACGGATGGACTTGG CGGTCTCTTCTTCTATATCTTGTTCGTTTACCCACTGTGCTCATGGATTC TCGCTCCGGGCCGCTTCAAGAGAGAACGCGGCATCACGTACGCCATTGGC GTCCTTGCCGCGATCGCAATCGCGAAGCTGAGCTTTGAGTGGTACGACCG CGGCGCCAACTACTACCAAATGATGGGCGTGAGAAGATACGCCACGCCGC TTGAGATCAAAAGAGCATACAAGAAGATTTCGCTCGAGCTTCACCCAGAC AAGGTGCGACTTCTACAGTGTTTGAAAACACCGAGGGGCGGAAACGAGTT GTCTTTTGGGGTGTATCGCCGAGGAGGAGGGGTAAAACCGCCCCGTCGTC TCGTTTCATAATTGAGAACGTTTTCCCAAAACGGGCAGCGGATCATGCTT CACTCGTTTTAGCCAAGATCACAAGCACGTCTCCCGACCTCATCAACTAG TGTCCCTCCGTCTCGCGCTCGCGCCTCTTTCTCTCTTTTCTTTTCGCCGC GTTCCGCCTCCAGAACCCATCCGAGGATGCCGCTGATCAATTCGCCCACA TGAAAGAAGCCTACGATGTGAGCGATGACGGCAACGCCCTATCGAGCAGT TTACTGCCTTATCTTTGGCGTTTTCTCTCGCTGTTTTCCTTGTCATCCTC GCGTAAATAGGAAGACTGCTGGCCAAATTTGCTGTGTAGTTGACGAGGTT AGCTCGGCAGCTCTCGGTTCCCACTCACAGCGAATCTGGGGGACACCTTG GTCCCGCTTCTGTCTGCATGATGAGGGATCCGGGATCTTTCCGTCTTGGC TTCTGCCGCCGAAGATTCGGAAAGCTCTGCTGCAGTAGCGTCTCTGGGTG ACGCCAGCACTATGTTGACATATGCGCGACGACGACAGCTCCATCCGCTA TAGCTGCGGTCGTTCCTGTTTTGCGAAGATGGCGATAGCTGCCAAGTGGC GATGACGAATACGGCGGCACTGGCACTGGCGACGACAGCAGCCGCCGCAG CCACGGCAGGAGCGGCGACTGCGGTGGCGGCGGCAGTTGCACCAGCGATT GCGGCGATAACGGCGATATTGAAGACCTGGCGACAGATCATGTCTTTGCG CAGTTTTGCACGCTTCAACGTTTCAGCGGCGATGTTTCTGCATTTCTCAA GATACTTCTGCATTTCTCAAAACTTGACTTGTTTTCGGCTTTTCCAAGAG AGTAAGCGGCTTGACGTTCTATCGCCTGTGTTTGTCCTGTCAACCTTTCG CCGCGCTTTTGCCCGCTTCCCTCTTTGCCTCCGCCGTCTACACCGTTCCC TTTCCCCCGACACCCCCGCATCTGCTCCTTCCCCGTCTCTCGTTCCCTTC TTCTCTTTCGACGCCGCATTTTTCTATCTTCTAACGCAACACCATCCCGA TCTGCCGCCCTACCCCAAATCTGCCCGCCTGTCCCGTTGTCTCCACCGGA ACCGACCTGCCTGCATGTCCTACGGGCATATCGTCCGCCCGGACCTTCCG TATCTGCCGCATTTCTGAATATGCCTGCAGGTGCTGATGGACATGGAATA CCGTCCGATCTACGACAAACTGGGGCCCGATGCCGTCAAGGCACGCAAGC GGCTCGACGAGACCGCCATTTTGATCGAAATGCTCGTCTTCTACGTATCA TGGGGCGTGCTGGCCTACCTGCTGACGCTCGGCAAGGGCGCCGCGACGGC GCGCTCCTGGATCTTCACGGGGCTCATCCTCATGCTCATTATCGAAGTGT GTATTTGCCGTTCGAGGTGGTTCGGATGCGGTTTAAATGGGCGTTTGCGG GGTGGTTGGATCTATGAGTTGTTCGTTTGGATTGGGTAAGGTGGTGCGAG GCGGTTGGCGCGGAATGGAATTGGTTGAGTCGCCTACTGGTTTTGGTTGC TTTTATTGACTTTGCTGCTGTCCCCTTGACAGTTTCGTGGGTATGGGTGC GCATGTGTGTGTGGAGACAACGAGTGATGCTTGCGGGACACGTGCTGTTG AAGGAGGGAGCGTTTGCGTAGACGTTGCTTTGAAGAGCAGTGGCTGCTGG TAAGGAGGGTGGGTTTACATCGTGCGACTTGTTTTCTGTTGTCGCTCGCT CGCCTCTTCGTCTGACGTTTTCGCATTCCATTCACTTTCCTTCTTTGTCC ATTCATTTCCCTCTTTCCTTCTTCCCACTTGTTCAATTTCTCGACGGACG GGAATTGGGCAATTGAACGAAACGGGTCCGGCCAACACCAACCGAAAAAA CGAACGCCTCGGAGCAAGGTGGCGATGGTGTTGAACGGGGAGGGGTCGGC GCTGCCGGCGTGGCTGTTCCCGTGGTGGACAGAGCACGAAGTCGTGTGGA TGCTGCACTCTGTCTTCCCGGCCTATATGAATGGCTGCCGTTCTCTTGGC AGCTTTCTCTACGTCGATGTCGACAAGCAGACGCGGGATCTCCTCCTGCA GCTCAAGGAGGGACACCAGGTGGGTGCTCGGTTCGGGTTCGGTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7567:288..2833+

>mRNA_P-wetherbeei_contig7567.1.1 ID=mRNA_P-wetherbeei_contig7567.1.1|Name=mRNA_P-wetherbeei_contig7567.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig7567:288..2833+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGACACGGATGGACTTGGCGGTCTCTTCTTCTATATCTTGTTCGT
TTACCCACTGTGCTCATGGATTCTCGCTCCGGGCCGCTTCAAGAGAGAAC
GCGGCATCACGTACGCCATTGGCGTCCTTGCCGCGATCGCAATCGCGAAG
CTGAGCTTTGAGTGGTACGACCGCGGCGCCAACTACTACCAAATGATGGG
CGTGAGAAGATACGCCACGCCGCTTGAGATCAAAAGAGCATACAAGAAGA
TTTCGCTCGAGCTTCACCCAGACAAGAACCCATCCGAGGATGCCGCTGAT
CAATTCGCCCACATGAAAGAAGCCTACGATGTGCTGATGGACATGGAATA
CCGTCCGATCTACGACAAACTGGGGCCCGATGCCGTCAAGGCACGCAAGC
GGCTCGACGAGACCGCCATTTTGATCGAAATGCTCGTCTTCTACGTATCA
TGGGGCGTGCTGGCCTACCTGCTGACGCTCGGCAAGGGCGCCGCGACGGC
GCGCTCCTGGATCTTCACGGGGCTCATCCTCATGCTCATTATCGAAGTGG
CGATGGTGTTGAACGGGGAGGGGTCGGCGCTGCCGGCGTGGCTGTTCCCG
TGGTGGACAGAGCACGAAGTCGTGTGGATGCTGCACTCTGTCTTCCCGGC
CTATATGAATGGCTGCCGTTCTCTTGGCAGCTTTCTCTACGTCGATGTCG
ACAAGCAGACGCGGGATCTCCTCCTGCAGCTCAAGGAGGGACACCAGGTG
GGTGCTCGGTTCGGGTTCGGTTAA
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