mRNA_P-wetherbeei_contig756.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig756.4.1
Unique NamemRNA_P-wetherbeei_contig756.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: D8LIJ3_ECTSI (DUF4149 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ3_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.740e-42
Identity = 79/205 (38.54%), Postives = 119/205 (58.05%), Query Frame = 3
Query:   39 ILDVLVPWVTRAGLLIGILLLSTAFTSKSQHVPLTDSALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRDLSTLAVALACTVLNLIFLLPRTVEVISKRLRLMQDLGKDSNDPDPRMRKLSKRFGVFHGMSNLCNFLALGCGVYHAVGFA 653
            +LD+++PW+TRA +L+ ++LL+     +   +PL+ + L VAHL SFS+WFG +VW+SF  G++LM+ +  + F    +  F AYF+ S +CL+VA                          P       VA+AC V NL+F  P+T   + +R R+ ++LG D   PDP++RKLSKRFG+FHG++NL N +AL CG  H    A
Sbjct:    3 VLDLMLPWITRAAILVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSARSDGDDGSTVGATP-----FLVAVACVVANLVFFSPQTTITMMERSRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALA 202          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A7S4ATM5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATM5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.160e-19
Identity = 70/199 (35.18%), Postives = 100/199 (50.25%), Query Frame = 3
Query:   69 RAGLLIGILLLSTAFTSKSQHVPL-TDSALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRDLSTLAVALACTVLNLIFLLPRTVEV------ISKRLRLMQDLGK-DSNDP----DPRMRKLSKRFGVFHGMSNLCNFLALGCG 629
            RA +LI +L   T F+S S  V   +   + + HLL+FS WFGC+VW+SF  G+++ K L R  F  + S  F AYF  S   + VA+A                             +L   LACT+LNL++  P T +V      + KRL    ++GK   +DP    DP+++ LSK FG+ HG+S L N  +LG G
Sbjct:   17 RAFVLIAVLAGCTWFSSSSNIVGGGSHHGIVLLHLLAFSSWFGCSVWVSFIAGIVMFKTLPRHVFGRLQSKLFPAYFVFSAGAIVVAIATSSALTKSREEASSTNNIPY---------SLIAILACTLLNLLYFEPATTKVMFQRHAVEKRLGTGHEIGKIRPDDPKKANDPQLKALSKTFGMLHGVSTLLNLGSLGFG 206          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A7S4MCN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCN5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.460e-19
Identity = 63/183 (34.43%), Postives = 91/183 (49.73%), Query Frame = 3
Query:  114 TSKSQHVPLTDSALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRDLSTLAVALACTVLNLIFLLPRTVEVISKRLRLMQDLGKDS-------NDP----DPRMRKLSKRFGVFHGMSNLCNFLALGCG 629
            TS    V      L + HLL+FS WFGC+VW+SF +G+++ + L R  F  + S  F AYF+ S V ++VA+                             + L V +A  +LNL+FL P T  ++ KR  + + LG          +DP    DP +R LSK+FG+ HG+S+L N  ALG G
Sbjct:   34 TSLESEVGHHRHYLVLVHLLAFSSWFGCSVWVSFVSGLVMFRNLPRHVFGRLQSRLFPAYFQYSAVTVAVAILTAGALGWRT-------------------NVLLVVMATVLLNLLFLEPETTRIMYKRHAVEKRLGTGHEVGQLKPDDPVKANDPELRALSKKFGMLHGISSLTNLAALGFG 197          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A1E7FD76_9STRA (DUF4149 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD76_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.090e-17
Identity = 79/202 (39.11%), Postives = 110/202 (54.46%), Query Frame = 3
Query:   63 VTRAGLLIGILLLSTAFTSKSQ-HVPLTDS-ALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRDLSTLAVALACTVLNLIFLLPRTVEV------ISKRLRLMQDLGK-DSNDP----DPRMRKLSKRFGVFHGMSNLCNFLALGCG 629
            V RA +L  +L   T F+S S  ++   +S +L + HLL+FS WFGC+VW+SF  G+++ K L R  F  + S  F AYF  S   + +A+            XXXXXXXXXXX       +L V LAC ++NL +  P T  V      + KRL    ++G+    DP    DP+++ LSK FG+ HG+S L N  ALG G
Sbjct:   15 VVRAFILATVLAGCTWFSSSSLLNIGSPNSHSLMLIHLLAFSSWFGCSVWVSFPAGIVMFKTLPRHTFGRLQSKLFPAYFLFSAGAIIIAIGTSGDLLSSTSNXXXXXXXXXXXIP----YSLIVILACILINLFYFEPATTRVMYQRHAVEKRLGTGHEIGQLRPTDPKKANDPQLKALSKTFGMLHGVSTLLNLAALGFG 212          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A7R9VXI6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXI6_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.320e-16
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 3
Query:  153 LSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRDLSTLAVALACTVLNLIFLLPRTVEV------ISKRLRLMQDLGKDSNDP-----DPRMRKLSKRFGVFHGMSNLCNFLALGCG 629
            L + HLL+FS WFGC+VW+SF  G+++ + L R  F  + S  F  YFR S + ++VA+ +                             L   +   +LNL+FL P T  +      + KRL    ++G+   D      DP +R LSK+FG+ HGMS+L N  ALG G
Sbjct:   51 LLLVHLLAFSSWFGCSVWVSFVAGLVMFRNLPRHVFGRLQSRLFPVYFRFSALNVAVAIFSAGAVGWNAYG-------------------LVAVMGTVLLNLLFLEPETTRIMFKRHTVEKRLGTGHEVGQLKPDDLEKANDPELRALSKKFGMLHGMSSLMNLAALGFG 201          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A094I7C1_9PEZI (DUF4149 domain-containing protein n=2 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094I7C1_9PEZI)

HSP 1 Score: 70.1 bits (170), Expect = 1.250e-10
Identity = 56/179 (31.28%), Postives = 81/179 (45.25%), Query Frame = 3
Query:  147 SALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRD----LSTLAVALACTVLNLIFLLPRTVEVISKRLRLMQDL--GKDSNDPDPR---MRKLSKRFGVFHGMSNLCNFLALGCGVYHAVGFAA 656
            + L+  H++++    G  VW SF +G+   + L+R QF  +    F  YF           A                       AP +    L  L  A  C ++NL+FL P+T E+I  RLR  Q++  GK S DP P    M  L+KRF   HG S L N ++LG  V++ VG +A
Sbjct:    8 NTLAPYHIIAYGTHLGAQVWQSFVSGITAYQTLERSQFNALQQRVFPRYFTFQ-------TALPFLVALTYPGANHGASSYHGALAPANQWSVLYPLTTAFVCGLVNLVFLGPKTSELI--RLRKAQEVKDGKKSIDPAPHSKDMLTLNKRFARVHGASALVNMVSLGATVWYGVGLSA 177          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A1B8CD58_9PEZI (DUF4149 domain-containing protein n=1 Tax=Pseudogymnoascus sp. WSF 3629 TaxID=1622147 RepID=A0A1B8CD58_9PEZI)

HSP 1 Score: 69.3 bits (168), Expect = 2.340e-10
Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 3
Query:  147 SALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRDLSTLAVALACTVLNLIFLLPRTVEVISKRLRLMQDL--GKDSNDPDPRMRK---LSKRFGVFHGMSNLCNFLALGCGVYHAVGFAA 656
            + L+  H++++    G  VW +F +G+   + L+R QF+ +    F  YF L    L + +A                       +   L  L  A  C  LNL+F+ P+T E+I  RLR  Q++  GK S DP P  R+   L++RF   HG S L N ++LG  V++ VG +A
Sbjct:    8 NTLAPYHIIAYGTHLGAQVWQTFVSGITAYQTLERSQFSTLQQRVFPRYFTLQ-TTLPLLIALTYPGAAPGPSSYHGALASTNQWSV--LYPLTTAFVCGFLNLVFVGPKTSELI--RLRKAQEVRDGKKSVDPAPHSREMLGLNRRFARVHGASALLNLVSLGTTVWYGVGLSA 177          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A094DCK4_9PEZI (DUF4149 domain-containing protein n=2 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094DCK4_9PEZI)

HSP 1 Score: 68.6 bits (166), Expect = 4.910e-10
Identity = 54/178 (30.34%), Postives = 79/178 (44.38%), Query Frame = 3
Query:  147 SALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVC-LSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRD----LSTLAVALACTVLNLIFLLPRTVEVISKRLRLMQDLGKDSNDPDPR---MRKLSKRFGVFHGMSNLCNFLALGCGVYHAVGFAA 656
            + L+  H+L++    G   W +F +G+   + L+R QF+ +    F  YF L     L +AL                        AP +    L  L  A  C  LNL+F+ P+T E+I  R       GK S DP P    M  L+KRF   HG S L N ++LG  +++ VG +A
Sbjct:    8 NTLAPYHILAYGTHLGAQTWQTFVSGITAYRTLERSQFSALQQRVFPRYFTLQTAFPLIIALT--------YPGVGLGASSYHGALAPANRWSVLYPLTTAFVCGFLNLVFVGPKTSELIHLRKAQETRDGKKSIDPPPHSKDMLGLNKRFARVHGASALLNLVSLGASIWYGVGLSA 177          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A1B8GY41_9PEZI (DUF4149 domain-containing protein n=12 Tax=Pseudogymnoascus TaxID=78156 RepID=A0A1B8GY41_9PEZI)

HSP 1 Score: 64.3 bits (155), Expect = 1.330e-8
Identity = 54/180 (30.00%), Postives = 83/180 (46.11%), Query Frame = 3
Query:  147 SALSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVC-LSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRD----LSTLAVALACTVLNLIFLLPRTVEVISKRLRLMQDL--GKDSNDPDPR---MRKLSKRFGVFHGMSNLCNFLALGCGVYHAVGFAA 656
            + L+  H++++    G  +W +F +G+   + L+R  F+ +    F  YF L     L VAL                        AP +    L  L  A  C  LNL+F+ P+T E+I  +LR  Q++  GK S DP P    M  L+KRF   HG S + N  +LG  +++ VG +A
Sbjct:    8 NTLAPYHIVAYGTHLGAQMWQTFVSGITAYQTLERAHFSALQQRVFPRYFTLQTTLPLLVALT--------YPGIASGPSSYHGALAPANHWSVLYPLTTAFVCGFLNLVFVGPKTSELI--KLRKAQEIKDGKKSIDPAPHSKDMLALNKRFARVHGASAVLNLASLGATIWYGVGLSA 177          
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Match: A0A8H8SCN1_9AGAM (DUF4149 domain-containing protein n=3 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SCN1_9AGAM)

HSP 1 Score: 63.9 bits (154), Expect = 2.050e-8
Identity = 55/175 (31.43%), Postives = 81/175 (46.29%), Query Frame = 3
Query:  153 LSVAHLLSFSIWFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAAXXXXXXXXXXXXXXXXXXXXXXAPRDLSTLAVA-----LACTVL----NLIFLLPRTVEVISKRLRLMQDLGKDSNDP--DPRMRKLSKRFGVFHGMSNLCNFLALGCGVYHAV 644
            L V + L +S  FG  +W SF  G I  + L R+QF  +   TF  +F  S   ++ AL                        AP DL +  V      LA TV+    NL++L P+T EV+ +R +L +   K  +DP     M+ L+K FG+ HG+S+L N  +  C + H V
Sbjct:   15 LRVLYQLLYSYVFGATLWGSFIQGFIAFRALPRQQFGMLQFKTFPVFFSTS-TAITAALLGIWAASHPEVRA-----------APLDLGSSPVVAQAWLLAFTVISHASNLLYLGPKTSEVMFERHKLERAEKKQYSDPTASAEMKALNKSFGMLHGISSLVNLFSFLCMLAHGV 177          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig756.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LIJ3_ECTSI1.740e-4238.54DUF4149 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S4ATM5_9STRA2.160e-1935.18Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4MCN5_9STRA6.460e-1934.43Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FD76_9STRA6.090e-1739.11DUF4149 domain-containing protein n=1 Tax=Fragilar... [more]
A0A7R9VXI6_9STRA2.320e-1633.53Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A094I7C1_9PEZI1.250e-1031.28DUF4149 domain-containing protein n=2 Tax=unclassi... [more]
A0A1B8CD58_9PEZI2.340e-1030.86DUF4149 domain-containing protein n=1 Tax=Pseudogy... [more]
A0A094DCK4_9PEZI4.910e-1030.34DUF4149 domain-containing protein n=2 Tax=unclassi... [more]
A0A1B8GY41_9PEZI1.330e-830.00DUF4149 domain-containing protein n=12 Tax=Pseudog... [more]
A0A8H8SCN1_9AGAM2.050e-831.43DUF4149 domain-containing protein n=3 Tax=Ceratoba... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig756contigP-wetherbeei_contig756:3942..5663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIJ3
PFAMsDUF4149
Model size1091
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons4
Evalue3.1e-45
EggNOG OGsKOG2886@1|root,KOG2886@2759|Eukaryota
Ec32 ortholog descriptionDomain of unknown function DUF4149
Ec32 orthologEc-18_003430.1
DescriptionDomain of unknown function (DUF4149)
Cds size630
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig756.4.1prot_P-wetherbeei_contig756.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig756 4368..5628 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186988.3995848-UTR-P-wetherbeei_contig756:3941..43671683186988.3995848-UTR-P-wetherbeei_contig756:3941..4367Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig756 3942..4367 -
1683186988.4519148-UTR-P-wetherbeei_contig756:5628..56631683186988.4519148-UTR-P-wetherbeei_contig756:5628..5663Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig756 5629..5663 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186988.4094698-CDS-P-wetherbeei_contig756:4367..45051683186988.4094698-CDS-P-wetherbeei_contig756:4367..4505Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig756 4368..4505 -
1683186988.4242432-CDS-P-wetherbeei_contig756:4721..50091683186988.4242432-CDS-P-wetherbeei_contig756:4721..5009Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig756 4722..5009 -
1683186988.4340389-CDS-P-wetherbeei_contig756:5112..51701683186988.4340389-CDS-P-wetherbeei_contig756:5112..5170Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig756 5113..5170 -
1683186988.442652-CDS-P-wetherbeei_contig756:5482..56281683186988.442652-CDS-P-wetherbeei_contig756:5482..5628Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig756 5483..5628 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig756.4.1

>prot_P-wetherbeei_contig756.4.1 ID=prot_P-wetherbeei_contig756.4.1|Name=mRNA_P-wetherbeei_contig756.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=210bp
MILDVLVPWVTRAGLLIGILLLSTAFTSKSQHVPLTDSALSVAHLLSFSI
WFGCAVWISFFNGVILMKLLDRKQFAGVVSVTFAAYFRLSFVCLSVALAA
AAALHHRAAAAASTAAATVAAAAPRDLSTLAVALACTVLNLIFLLPRTVE
VISKRLRLMQDLGKDSNDPDPRMRKLSKRFGVFHGMSNLCNFLALGCGVY
HAVGFAAHA*
back to top

mRNA from alignment at P-wetherbeei_contig756:3942..5663-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig756.4.1 ID=mRNA_P-wetherbeei_contig756.4.1|Name=mRNA_P-wetherbeei_contig756.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1722bp|location=Sequence derived from alignment at P-wetherbeei_contig756:3942..5663- (Phaeothamnion wetherbeei SAG_119_79)
CGCATCCAGAATATATTTTATTCTTTGCCGCAATCATGATCCTCGATGTG CTGGTGCCATGGGTGACGCGGGCCGGACTCCTCATCGGTATCCTGCTCCT TTCCACTGCATTCACCTCAAAAAGCCAGCACGTCCCGTTGACCGATTCGG CATTAAGCGTCGCGCATTTGCTCTCCTTTAGGTATGTGACGAGTGTGCTT GCAGCCGACAGTGCTTGCAGCACTGCTGCCATACTTCCAGCTTCAAAGCT GCATGGCAAAGATTTTTCCCAGTCTTTTTTAGGTTGTGCAGATCCTGTAG GCCCCGTCTTGCAGCCAGCGCGTAAATAGCAGGTCTCGCTCGCCTTCTTC CCGGGGCGCTTTTTTGCAACCTGTCAACATAGTGCTGTCAAACTTCCAAA CTTCAACCCACTTTCCTCTCCTTTCCCCCCTCTCTTTGGTTGCCGCCCGC TCGTCCGCTTTGCTTTCCACATTCTGCGCGGTGTGGATCACAGCATCTGG TTCGGCTGTGCGGTATGGATAAGCTTTTTCAACGGGGTCATCCTCATGAA GGTGAGCCAAAGAGCCATATTTCACACTGCCTCCGTTGCTCTCCAAGCGG GGCCAGCTAACCAACTTCCCTCCTTCCTCCCTCCGCCTTCTTTCTCCTTT GCAGCTGCTCGACCGCAAGCAGTTCGCCGGCGTCGTGTCGGTCACTTTCG CCGCGTACTTCCGCCTCAGCTTCGTCTGCCTCTCCGTCGCCCTCGCTGCC GCCGCGGCCCTTCACCACCGCGCCGCCGCCGCCGCTTCGACCGCCGCCGC CACAGTTGCAGCGGCGGCGCCCCGGGACCTTTCGACGCTGGCGGTGGCGC TGGCGTGCACAGTGCTCAACCTGATCTTCCTGCTGCCGCGGACGGTGGAA GTGATTTCTAAACGGCTGCGGCTCATGCAAGACCTCGGGAAGGTGATGCT TCCGAGGATACTCGGACGAAAACTAACACTAGGGCTGCAAGACGACTTTT TAAAAGAGAAGCGGCGGAAAGCGCCGATTCCTCAGCGTGCAGGGGATTTT AGAGCATTTTTCACTACAAGAGAACTGAAATCCTCACATCTTCCCTAATT TCCGTCTCCACATCTGCTCCCATTAAATGTTCCTGCCCGTCCGACCGGCT GTCGCCAGGACTCGAACGACCCGGACCCGCGGATGCGCAAACTGTCGAAG CGCTTCGGTGTGTTTCATGGCATGTCGAACTTATGCAACTTCTTAGCGCT CGGCTGCGGCGTCTACCACGCAGTTGGCTTTGCCGCCCATGCCTGATGCG AGCGGCCTGCTAATCGTATTGGATATGGGCAAAGAAGCAGCCCATTCGGC CAGGATTACGGGCAACCAGGCGGGAAACTGCCATCTGTTTTGGCGGCGCT TCACAGAACTGCTTACGCTGACGATGCGTCACGCCAGGGGCCGCGGTCGC ACCCGCGGCGGAGCAGTGACGGCGGGATCTCGGCAGTGAGAATGAGGATA GGGGGGAATTCAGTAGCAGCGCCGCCTCTTTCGGAGTGTTGGCAGGGTCC GTAGCGAACATAGGTCACACGGATGTACGGATAGCCGGGCACAAGGGCTT GCACGAAAAAGGCGGGGTAAACGAAGCGTAGAGGCCAAAAAGAGGCCGAG AGGGGAAAGATGGATGACGTGCATTATTACATCGAGGGAAGGCCATCATG GGAAACCAAGCAGTTCCTCCAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig756:3942..5663-

>mRNA_P-wetherbeei_contig756.4.1 ID=mRNA_P-wetherbeei_contig756.4.1|Name=mRNA_P-wetherbeei_contig756.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig756:3942..5663- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCTCGATGTGCTGGTGCCATGGGTGACGCGGGCCGGACTCCTCAT
CGGTATCCTGCTCCTTTCCACTGCATTCACCTCAAAAAGCCAGCACGTCC
CGTTGACCGATTCGGCATTAAGCGTCGCGCATTTGCTCTCCTTTAGCATC
TGGTTCGGCTGTGCGGTATGGATAAGCTTTTTCAACGGGGTCATCCTCAT
GAAGCTGCTCGACCGCAAGCAGTTCGCCGGCGTCGTGTCGGTCACTTTCG
CCGCGTACTTCCGCCTCAGCTTCGTCTGCCTCTCCGTCGCCCTCGCTGCC
GCCGCGGCCCTTCACCACCGCGCCGCCGCCGCCGCTTCGACCGCCGCCGC
CACAGTTGCAGCGGCGGCGCCCCGGGACCTTTCGACGCTGGCGGTGGCGC
TGGCGTGCACAGTGCTCAACCTGATCTTCCTGCTGCCGCGGACGGTGGAA
GTGATTTCTAAACGGCTGCGGCTCATGCAAGACCTCGGGAAGGACTCGAA
CGACCCGGACCCGCGGATGCGCAAACTGTCGAAGCGCTTCGGTGTGTTTC
ATGGCATGTCGAACTTATGCAACTTCTTAGCGCTCGGCTGCGGCGTCTAC
CACGCAGTTGGCTTTGCCGCCCATGCCTGA
back to top