mRNA_P-wetherbeei_contig7555.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A8J9WNV4_9CHLO (Ran-binding protein 10 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNV4_9CHLO) HSP 1 Score: 179 bits (454), Expect = 6.230e-47 Identity = 103/254 (40.55%), Postives = 145/254 (57.09%), Query Frame = 2
Query: 419 RPEDGDTEA-LPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAF-GSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDL-AEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMA 1171
RPED + E LP ++T + +F+ V DK+T RYTG+ NH D G + NRP+P ++R +Y+EV ++ + + +G F M QPG + SYGY G+DG +GQ +DYGP F AGD +G GI +RQE+FFT NGKNLGTAF G L+P +GLH+PGE + NF +SPF F L A E E +++EA A+ + + G+ +V +YLLH GY +TL + A
Sbjct: 15 RPEDEEEEEPLPSHFNTNNFGNFLDVEKDKLTVRYTGQGNHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGSKGL-----------------IGVGFADKNFKMGKQPGWEQHSYGYHGDDGKKF-HASGQGEDYGPHFSAGDVIGAGIHIQRQEIFFTKNGKNLGTAFRGLTQLPLYPTIGLHSPGECIVVNFG---ASPFAFKLDAMLEEEREQQEA-AVQSIPIPAGVTHRLVREYLLHYGYADTLRAFDA 246
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A836BBQ5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBQ5_9CHLO) HSP 1 Score: 169 bits (428), Expect = 2.670e-43 Identity = 97/242 (40.08%), Postives = 129/242 (53.31%), Query Frame = 2
Query: 431 GDTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETL 1156
G E LP +T H +++ DK+T RY G A H D G + AN P+P +Y+E+ I+ G + + IG F +T QPG + GSYGY G+DG +G +DYGP FGAGDTVG GI RQE+FFT NG L A V G L+P +GLH+ GE V+ NF + PFVFD+ AE + + A+ R+ + PG A+V YLLH GY +TL
Sbjct: 2 GSLEPLPSALNTARQGHGLELK-DKLTVRYAGDARHNNDVGAIQANHPVPVNCTVYYYELTILDGGISGK-----------------IAIGFADKNFKVTRQPGWEVGSYGYHGDDGKKF-IGSGMGEDYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVRGGLYPTIGLHSKGEMVQLNFG---AKPFVFDIEGMLAEERAAQRAAVERIPVAPGTSHALVRQYLLHYGYADTL 221
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A835TEN8_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TEN8_CHLIN) HSP 1 Score: 168 bits (425), Expect = 6.980e-43 Identity = 96/242 (39.67%), Postives = 129/242 (53.31%), Query Frame = 2
Query: 431 GDTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETL 1156
G E LP ++ H +++ DK+T RY G A H D G + AN P+P FY+E+ ++ G + + IG F +T QPG + GSYGY G+DG +G +DYGP FGAGDTVG GI RQE+FFT NG L A V G L+P +GLH+ GE V+ NF + PFVFDL AE + + A+ R+ + PG A+V YLL+ GY +TL
Sbjct: 2 GSLEPLPSALNSARQGHGLELK-DKLTVRYAGDARHNNDVGAIQANHPVPVNCTVFYYELTVLDGGISGK-----------------IAIGFADKNFKLTRQPGWEVGSYGYHGDDGKKF-IGSGMGEDYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVRGGLYPTIGLHSKGEMVQLNFG---ARPFVFDLEGMLAEERAAQRAAVERIPVSPGTSHALVRQYLLYHGYADTL 221
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A7S2DQ84_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DQ84_9EUKA) HSP 1 Score: 168 bits (425), Expect = 1.270e-42 Identity = 97/253 (38.34%), Postives = 136/253 (53.75%), Query Frame = 2
Query: 425 EDGDTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMAESEG 1183
ED E LP DT H F+ VS DK+T RY G+ NH+ D G + ++ P P R +YFEV+ V A T ++ IGL FP+ QPG + SY Y G+DG ++ + + +GP FG+GD +GCG+ ER+E+FFT N +LG AF V G L+P +GLH+PGE V NF + PF FD+ + + + E + ++ + A+V YLLH G+ ETL SL EG
Sbjct: 45 EDDADEPLPTLLDTIDHPRFLAVSKDKLTVRYAGRGNHSQDVGAVRSDWPCPQRCLLYYFEVS-VQDAGTRG----------------SIAIGLADGSFPLNRQPGWEPNSYAYHGHDGRRY-SESERGEHFGPRFGSGDVIGCGLLSERREIFFTKNSVHLGVAFSEVCGLLYPTIGLHSPGELVSVNFG---TEPFAFDVEQLIQVQRNAKCEQMLSSTMPMESIEALVRGYLLHFGFEETLASLEQPGEG 276
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A2R6XUI5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUI5_MARPO) HSP 1 Score: 163 bits (413), Expect = 1.720e-41 Identity = 93/256 (36.33%), Postives = 133/256 (51.95%), Query Frame = 2
Query: 419 RPEDG-DTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMAESEG 1183
RPE + E +P +TT+ HF+ +S DK++ARY G H D G + +NRP P ++ +YFE+++ ++IG + F M+ QPG + SYGY G+DG + G+ D +GP F GDTVG GI++ QE+FFT NGK +GT G L+P +GLH+P E V NF PF+FD+ E + R ++ V L + VV YLLH GY +TL + S G
Sbjct: 27 RPEPKPEEEEVPTHLNTTTCGHFLVISTDKLSARYNGDGQHGHDVGAIQSNRPAPHQRLLYYFEISLKDRGQRG-----------------VISIGFTDENFKMSRQPGWEPNSYGYHGDDGLLYHGR-GRGDSFGPTFTTGDTVGAGINYAAQELFFTKNGKLVGTHIKEGKGPLYPTIGLHSPSEKVEVNFG---QKPFIFDIEAMVQEERERRQRSVESVPLPLSISHNVVRTYLLHYGYQDTLTAFDVASGG 261
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: U5DBU3_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5DBU3_AMBTC) HSP 1 Score: 159 bits (403), Expect = 3.870e-40 Identity = 93/250 (37.20%), Postives = 135/250 (54.00%), Query Frame = 2
Query: 434 DTEALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSLMAESEG 1183
D E +P +T + F+ VS DK++ +YTG+A H D G + +N P P+++ +YFE+ + +++IG ++ F M QPG + SYGY G+DG L G+ D +GP FG GDTVG GI++ E+FFT NG LG+ V G LFP +G+H+P E V NF FVFD+ F AE + ++ A+ +VSL + +V YLLH GY +TL S S+G
Sbjct: 26 DEEEVPTHLNTMNSCSFLGVSTDKLSIQYTGEALHGHDVGAVQSNCPAPTKRLVYYFEIFVRDAGQKG-----------------SISIGFTNERFKMRRQPGWEANSYGYHGDDGL-LYHGQGKGDAFGPTFGTGDTVGGGINYASNELFFTKNGGFLGSVCKDVKGPLFPTIGVHSPREKVDVNFG---QRRFVFDIEAFAAEERMKQQMAIEKVSLPLSISHWIVRSYLLHYGYQDTLTSFDIASKG 254
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A2V0P549_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P549_9CHLO) HSP 1 Score: 160 bits (404), Expect = 5.580e-40 Identity = 112/287 (39.02%), Postives = 142/287 (49.48%), Query Frame = 2
Query: 449 PREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSV--SGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNSL------------MAESEGE---AAALRSTAMTRNGVTGGANTAAVA 1258
P E T+H +++ DK+T RYTG H D G + ANRP+P++Q FYFEV I+ + +G +T QPG + GSYGY G+DG +G+ ++YGP FGAGDTVG + +QE+FFT NG L TAF SV S L P VGLH+ E V NF + PF FDL AE EAEA+ V L P V YLLH GY TL + M+ EGE AA+L + A R + G AAVA
Sbjct: 6 PTELSPTAHGPHLELGKDKLTVRYTGDGRH--DVGAIQANRPVPAKQLLFYFEVTILDQGELGK-----------------IGVGFTPKDVKLTRQPGWEPGSYGYHGDDGLRY-SSSGKGEEYGPRFGAGDTVGAALHLGKQEIFFTKNGNKLRTAFSSVRNSPGLVPTVGLHSRNEAVAVNFG---ARPFRFDLEGLLAEEAAAEAEAVDSVPLPPSAAHEAVRSYLLHYGYASTLAAFDAAAGLAGVEQPMSTGEGEDPAAASLPTRAEARRLIMAGDMAAAVA 269
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: I0YML3_COCSC (SPRY-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YML3_COCSC) HSP 1 Score: 159 bits (403), Expect = 7.970e-40 Identity = 94/256 (36.72%), Postives = 138/256 (53.91%), Query Frame = 2
Query: 419 RPEDGDTEA-LPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAF-GSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDL-AEFEAEAQRREAEA-----LARVSLDPGLVRAVVLDYLLHQGYIETLNS 1162
RP+D + E L ++T + +F+ V DK+T RYTG+ H D G + NRP+P ++R +Y+EV ++ + +G F M QPG + SYGY G+DG + GQ ++YGP F GD +G GI +RQE+FFT NGK+LG AF G L+P GLH+PGE + NF +SPF F+L A + E ++ EA + +S+ G+ +V +YLLH GY +TL +
Sbjct: 15 RPDDDEEEEPLASHFNTNNFGNFLDVEKDKLTVRYTGQGAHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGEKGL-----------------IGVGFADKNFKMGKQPGWEPHSYGYHGDDGKKF-HQNGQGEEYGPQFTLGDVIGAGIHIQRQEIFFTKNGKHLGVAFRGLPQLPLYPTAGLHSPGECIAVNFG---ASPFAFNLEAMLQEEREQEEAASWVLHCACSISIPAGVTHRLVREYLLHYGYADTLRA 249
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: A0A7J7CF73_TRIWF (Ran-binding protein 10-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CF73_TRIWF) HSP 1 Score: 159 bits (402), Expect = 1.360e-39 Identity = 92/247 (37.25%), Postives = 131/247 (53.04%), Query Frame = 2
Query: 425 EDGDTEALPREWDT-TSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDPGLVRAVVLDYLLHQGYIETLNS 1162
ED E LP E +T S F+ VS DK++ +YT H D G + AN+P P ++ +YFE+ + + + IG S+ F M QPG + S GY G+DG L G+ DD+GP F DTVG GI++ QE+FFT NG +GT + + G LFP V +H+ E + NF PF FDL E+EA+ + R+ + ++SL P + +V YLLH GY ETL++
Sbjct: 75 EDDGEEELPTELNTINSSGGFLVVSTDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIFVKNAGVKGQ-----------------IAIGFTSESFKMRRQPGWEANSCGYHGDDGH-LYRGQGKGDDFGPTFTTNDTVGGGINYASQEIFFTKNGTIVGTVYKDIKGPLFPTVAVHSQNEEIEVNFG---QRPFAFDLKEYEAQERMRQQMTIEKISLLPNVSHVIVRAYLLHYGYEETLDA 300
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Match: R1F2Q0_EMIHU (B30.2/SPRY domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F2Q0_EMIHU) HSP 1 Score: 152 bits (385), Expect = 2.820e-39 Identity = 92/247 (37.25%), Postives = 127/247 (51.42%), Query Frame = 2
Query: 440 EALPREWDTTSHAHFVQVSIDKVTARYTGKANHAADFGTLGANRPLPSRQRYFYFEVAIVSGAATXXXXXXXXXXXXXXXXXXTVTIGLISDGFPMTLQPGADTGSYGYRGNDGCCLGPKAGQRDDYGPPFGAGDTVGCGIDFERQEVFFTCNGKNLGTAFGSVSGALFPAVGLHAPGETVRANFAGSASSPFVFDLAEFEAEAQRREAEALARVSLDP-GLVRAVVLDYLLHQGYIETLNSLMAES 1177
+ LP E DT SH ++ + DK + RY GK NH D G + +RP P+R +YFE ++ + IGL + F + QPG + S+GY DG + + + YGP +GAGD VGCG+ + +FFT NG++LG AF V L+P VGLH+P E V NF +PF FD A A RRE+E A + P GLV +V YLLH + +TL +L +S
Sbjct: 32 QPLPSELDTVSHPRYIIAARDKRSVRYIGKGNHGYDVGAIRTDRPCPARCALYYFEATVLDAGERG-----------------ALCIGLAGESFSLHRQPGWEPDSFGYHAEDGRKY-TDSERGEVYGPAWGAGDVVGCGLVNATRSIFFTRNGQHLGVAFSDVPPQLYPTVGLHSPNEAVALNFG---EAPFAFD-ARGHVAALRRESEQQAALHHAPAGLVAGLVRSYLLHHAFADTLEALERDS 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7555.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7555.1.1 >prot_P-wetherbeei_contig7555.1.1 ID=prot_P-wetherbeei_contig7555.1.1|Name=mRNA_P-wetherbeei_contig7555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=388bp MSDDTTLTPWRRRRPCQVVVNAGMLLGGRSASREPFGGAALARASPARPEback to top mRNA from alignment at P-wetherbeei_contig7555:679..2893+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7555.1.1 ID=mRNA_P-wetherbeei_contig7555.1.1|Name=mRNA_P-wetherbeei_contig7555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2215bp|location=Sequence derived from alignment at P-wetherbeei_contig7555:679..2893+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7555:679..2893+ >mRNA_P-wetherbeei_contig7555.1.1 ID=mRNA_P-wetherbeei_contig7555.1.1|Name=mRNA_P-wetherbeei_contig7555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig7555:679..2893+ (Phaeothamnion wetherbeei SAG_119_79)back to top |