mRNA_P-wetherbeei_contig7552.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7552.1.1
Unique NamemRNA_P-wetherbeei_contig7552.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7S2V3P7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3P7_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.760e-25
Identity = 53/78 (67.95%), Postives = 65/78 (83.33%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLKDKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            +DKR++++VEARNGLE YLYNLK+A  DTLKDKL E+D++ L+TTV  +LEW+ESH    KE YDEKQKEVE VANPI
Sbjct:  205 EDKRNKDKVEARNGLESYLYNLKSAIEDTLKDKLEEDDKETLKTTVNDSLEWLESHPADEKEAYDEKQKEVEGVANPI 282          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7S4SZM3_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SZM3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.690e-22
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLKDKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            QDK ++E++EARN LE YLYNLK +  D LKDKLSE+D + L + VE AL WME H  A K+EYDEKQKEVE +ANPI
Sbjct:  642 QDKAEKEKIEARNQLEAYLYNLKNSINDQLKDKLSEDDAETLNSAVENALIWMEDHPAAEKDEYDEKQKEVEGIANPI 719          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7S4N1W3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1W3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.590e-20
Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLKDKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            QD+R+R ++EARN LEGYLYNLK + +DTLKDKL+E+D++ L   ++ AL WME +  + KE+YDEKQKEVE V NPI
Sbjct:  617 QDERERAKIEARNQLEGYLYNLKNSVSDTLKDKLNEDDKETLTKVIDEALIWMEDNPASEKEDYDEKQKEVEGVVNPI 694          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7S1D547_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D547_CYCTE)

HSP 1 Score: 93.2 bits (230), Expect = 1.720e-20
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLKDKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            QDK +RE+++ARN LE YLYNLK +  D L+DKLSEED+  L  TVE AL W+E +  A K++YD KQKEVE VANPI
Sbjct:  355 QDKAEREKIQARNELEAYLYNLKNSINDALQDKLSEEDKSSLTQTVEDALVWLEDNPAAEKDDYDSKQKEVEQVANPI 432          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7S2FNC6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNC6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.250e-20
Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDT---LKDKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            +DK+ + R++++NGLEGYLYNLK    D    L DKLSEED++EL  T+  AL+W++ + EA  EE+DEKQKEVE VANPI
Sbjct:   84 EDKKVKARIDSKNGLEGYLYNLKNTLEDDEKGLADKLSEEDKEELDNTINEALDWLDENPEAEAEEFDEKQKEVEQVANPI 164          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7R9ZHJ9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHJ9_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.100e-19
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLK---DKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            +DK+ +ER++ARNGLE YLYNLK    D  K   D +S ED+KELQ  ++  L+WM+ + EA K++YDEKQKEVE++ANPI
Sbjct:  112 EDKKVKERIDARNGLESYLYNLKNTLEDDEKGMADAISAEDKKELQDIIDETLDWMDENPEAEKDDYDEKQKEVENIANPI 192          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7R9VHI4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VHI4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.460e-19
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLKDKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            QD+ ++ ++EARN LEGYLYNLK + +D LKDKL+E+D++ L   ++ AL WME +  A KEEYD+KQKEVE V NPI
Sbjct:  310 QDELEKAKIEARNQLEGYLYNLKNSVSDALKDKLNEDDKETLTKVIDDALIWMEDNPAAEKEEYDDKQKEVEDVVNPI 387          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A7S0KX16_9STRA (Hypothetical protein n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S0KX16_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.230e-19
Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLK---DKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            +DK+ +ER++ARNGLE YLYNLK    D  K   D +S ED+KELQ  ++  L+WM+ + EA KE+YDEKQKEVE++ANPI
Sbjct:  374 EDKKVKERIDARNGLESYLYNLKNTLDDDEKGVADNISAEDKKELQDIIDETLDWMDENPEADKEDYDEKQKEVENIANPI 454          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: A0A6V2K950_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2K950_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.640e-19
Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDT---LKDKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            +DK+ +ER++ARNGLE YLYNLK    D    L D +S +D+KELQ  ++  L+WM+ + EA KE+YDEKQKEVE+VANPI
Sbjct:  526 EDKKVKERIDARNGLESYLYNLKNTLDDDEKGLADNISAQDKKELQDMIDETLDWMDENPEADKEDYDEKQKEVENVANPI 606          
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Match: B8BWB9_THAPS (Heat shock protein/chaperone n=4 Tax=Bacillariophyta TaxID=2836 RepID=B8BWB9_THAPS)

HSP 1 Score: 89.0 bits (219), Expect = 6.650e-19
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 1
Query:    1 QDKRDRERVEARNGLEGYLYNLKTACTDTLK-DKLSEEDRKELQTTVETALEWMESHAEASKEEYDEKQKEVEHVANPI 234
            +DK+ +ER++ARNGLE YLYNLK    D  K D +S ED+KELQ  V+  L+WME + EA KE+YD KQKEVE++ANPI
Sbjct:  541 EDKKVKERIDARNGLESYLYNLKNTLDDDEKADNISAEDKKELQDIVDETLDWMEENPEADKEDYDGKQKEVENIANPI 619          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7552.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V3P7_9STRA3.760e-2567.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4SZM3_9STRA9.690e-2264.10Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S4N1W3_9STRA1.590e-2060.26Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1D547_CYCTE1.720e-2061.54Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2FNC6_9STRA3.250e-2056.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9ZHJ9_9STRA1.100e-1955.56Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7R9VHI4_9STRA3.460e-1957.69Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0KX16_9STRA4.230e-1956.79Hypothetical protein n=3 Tax=Bacillariophyta TaxID... [more]
A0A6V2K950_9STRA6.640e-1956.79Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8BWB9_THAPS6.650e-1959.49Heat shock protein/chaperone n=4 Tax=Bacillariophy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7552contigP-wetherbeei_contig7552:631..1273 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog35128.Thaps27656
PFAMsHSP70
Model size234
Max annot lvl2836|Bacillariophyta
KEGG koko:K09490
KEGG TC1.A.33
KEGG Pathwayko03060,ko04141,ko04918,ko05020,map03060,map04141,map04918,map05020
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.09e-19
EggNOG OGsCOG0443@1|root,KOG0100@2759|Eukaryota,2XAUE@2836|Bacillariophyta
DescriptionBelongs to the heat shock protein 70 family
Cds size234
COG categoryO
BRITEko00000,ko00001,ko03110,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186987.971425-CDS-P-wetherbeei_contig7552:630..7111683186987.971425-CDS-P-wetherbeei_contig7552:630..711Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7552 631..711 -
1683186987.9914906-CDS-P-wetherbeei_contig7552:1120..12731683186987.9914906-CDS-P-wetherbeei_contig7552:1120..1273Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7552 1121..1273 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7552.1.1prot_P-wetherbeei_contig7552.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7552 631..1273 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7552.1.1

>prot_P-wetherbeei_contig7552.1.1 ID=prot_P-wetherbeei_contig7552.1.1|Name=mRNA_P-wetherbeei_contig7552.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp
QDKRDRERVEARNGLEGYLYNLKTACTDTLKDKLSEEDRKELQTTVETAL
EWMESHAEASKEEYDEKQKEVEHVANPI
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mRNA from alignment at P-wetherbeei_contig7552:631..1273-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7552.1.1 ID=mRNA_P-wetherbeei_contig7552.1.1|Name=mRNA_P-wetherbeei_contig7552.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=643bp|location=Sequence derived from alignment at P-wetherbeei_contig7552:631..1273- (Phaeothamnion wetherbeei SAG_119_79)
CAGGACAAGCGGGATCGGGAGCGCGTGGAGGCGCGCAACGGGCTGGAGGG CTACCTTTACAACCTCAAGACGGCCTGCACGGACACGCTCAAGGACAAGC TCTCGGAGGAGGACCGGAAGGAGCTCCAGACCACCGTCGAAACCGCCCTT GAGGTACATCAGCTTGTTCAATCCATTCGTTCATTTGGTGTCTCTGATCC GTTCGTTTGCAATTTGTCTATTTTGGATTGCTGTCGGCCGGTTTAGGCAC TTAATCGGTTGCGGTTCGGTGGCGGCTCGCTGCCTGTTTGGTGGCAGTTT TGGTTGCAGTCTGCATTGCTCGTTCAAAGCGCGTTTCGGCAGGTGGCTGC GGCCGGTGCCAGCAAGGTGTCCTCCTCTTGTTGAGGCAATGCTTTCTGCA GCCGCTGCAGAGCTCACACATGCGGCTGCTTCTGGCAAGCGCGCATTTGT TCTCTGTTTCTTTATTTGCTTCCATTGCAGCGCCGTATCCTTCTTACGAA TAACCGCAACAGACTAATTTTAGACCTATGTCATTCCTTATGTTGCTGAA CCGATCACGCAGTGGATGGAGTCGCATGCGGAGGCTTCGAAAGAGGAGTA CGACGAAAAGCAGAAAGAGGTCGAACATGTCGCCAACCCCATT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7552:631..1273-

>mRNA_P-wetherbeei_contig7552.1.1 ID=mRNA_P-wetherbeei_contig7552.1.1|Name=mRNA_P-wetherbeei_contig7552.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig7552:631..1273- (Phaeothamnion wetherbeei SAG_119_79)
CAGGACAAGCGGGATCGGGAGCGCGTGGAGGCGCGCAACGGGCTGGAGGG
CTACCTTTACAACCTCAAGACGGCCTGCACGGACACGCTCAAGGACAAGC
TCTCGGAGGAGGACCGGAAGGAGCTCCAGACCACCGTCGAAACCGCCCTT
GAGTGGATGGAGTCGCATGCGGAGGCTTCGAAAGAGGAGTACGACGAAAA
GCAGAAAGAGGTCGAACATGTCGCCAACCCCATT
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