mRNA_P-wetherbeei_contig7542.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI) HSP 1 Score: 152 bits (383), Expect = 1.750e-39 Identity = 84/166 (50.60%), Postives = 114/166 (68.67%), Query Frame = 1
Query: 1 LQAWARGCAIRRRAAAAVAAASERLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLLAALAAAH 498
+QA ARG A R++ +A+A R+ A +A A+PS+ L R+ DAL L++ T LT ++RAC+ALEL++RYS+VCC+V+A + P VL +LIR LNRSPPHQKIL+ A+ T RN+A+ G L AL+AAP +VDLLQ R+R E F+P RLL L AH
Sbjct: 2275 IQAAARGMAARKKTGPGIASARARIEKANANALADPSQILGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYAITTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAH 2440
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE) HSP 1 Score: 149 bits (375), Expect = 2.080e-38 Identity = 82/166 (49.40%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 LQAWARGCAIRRRAAAAVAAASERLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLLAALAAAH 498
+QA ARG A R++ +++A R+ A +A A+PS+ L R+ DAL L++ T LT ++RAC+ALEL++RYS+VCC+V+A + P VL +LIR LNRSPPHQKIL+ + T RN+A+ G L AL+AAP +VDLLQ R+R E F+P RLL L AH
Sbjct: 2156 IQAAARGMAARKKTDPGISSARARIERANANALADPSQVLGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYVITTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAH 2321
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A835Z978_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA) HSP 1 Score: 144 bits (363), Expect = 8.410e-37 Identity = 88/165 (53.33%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 LQAWARGCAIRRRAAAAVAAASERLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENA-APAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLLAALAA 492
LQA ARG R+RA AVAAA +++ A AR NP ETL R+ +AL + GT LT+V RAC LELSTRYS V C VVAE+ AP VL LIR+LNRSPPHQ+IL+ L TLRN+ARH +L L+AAP V +D++Q RD E F+ A RL + A
Sbjct: 1573 LQARARGFLARQRAGPAVAAARAKVQTANAFARNNPGETLGARVANALAIMARGTMLTKVARACKTLELSTRYSPVSCMVVAEDQNAPTVLYNLIRSLNRSPPHQRILKFTLETLRNIARHNRRLCGLIAAPPGAATVLLDVMQMYRDNPELFLLATRLFTCMVA 1737
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A7S3YG01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG01_HETAK) HSP 1 Score: 78.6 bits (192), Expect = 7.540e-15 Identity = 50/140 (35.71%), Postives = 78/140 (55.71%), Query Frame = 1
Query: 70 RLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLLAALA 489
R+ A ARA P++ L R AL L +T++ + C+ LELST YSR CC+ A + EL+R+ NRS PHQ++L+ L L N+ R+ + + AP V V VD++Q R+ ++F+ + L+A +A
Sbjct: 9 RVERANAQARAEPAQRLGSRTRSALEQLLATKSVTQIKKCCVTLELSTTYSRRCCESFVFAEAHLRMFELMRSCNRSLPHQELLKHVLRILANLTRYPHLVGTVAQAPG-CVEVLVDMMQFFRELEDTFLLSVGLVATMA 147
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A7S1E7E3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7E3_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.630e-14 Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 166 QLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPA 465
+LT + A + LE+STR SR CC AP++L EL+ NRS PH +I+R+ L+TLRNV++H L VA P GV +DL+Q RD+ + FV A
Sbjct: 1 RLTEITDAAITLEMSTRLSRNCCVAFVNVGAPSILYELLGTCNRSLPHVEIVRIVLLTLRNVSKHKDLLND-VATPGS-GGVILDLVQMFRDKDDVFVVA 98
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A2K1IF47_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IF47_PHYPA) HSP 1 Score: 75.5 bits (184), Expect = 9.030e-13 Identity = 46/136 (33.82%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 70 RLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLL 477
RLR A + S+ L R+ +AL L + ++ ++ C ++++T +S++CC+ +AE A L++LI+ +NRSPPH+++L+ AL L N+AR LA VA+ V + V+ L R++ F A R+L
Sbjct: 1450 RLRMQSTAATVDNSQRLGNRLTEALSQLLSQKTVSGILHTCATIDMATEHSKLCCERLAEGGAVNKLLQLIQTVNRSPPHEQVLKHALSILGNLARFPN-LAFSVASEHDSVNIIVEQLLIFRNKEVVFSKAMRIL 1584
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A5N6Q889_9ROSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6Q889_9ROSI) HSP 1 Score: 67.8 bits (164), Expect = 4.170e-10 Identity = 45/143 (31.47%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 70 RLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLLAALAAAH 498
RLR + + S + R+ AL L + ++ ++ C L+++T +S+ CC+ + + A L++LIR+++RS P Q++L+ AL TLRN+ARH + ALV + V + L + +R + E F A+ LL + + H
Sbjct: 1221 RLRVQKSSTNVDDSRRIINRLLAALSELLSVKSVSGILHTCATLDMATEHSQKCCEELVDAGAIPTLLKLIRSVSRSIPDQEVLKHALSTLRNLARHPHLVEALVDSHG---SVEIILWEFLRSKEEGFFIASELLKKICSTH 1360
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A2R6X111_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X111_MARPO) HSP 1 Score: 67.4 bits (163), Expect = 5.840e-10 Identity = 37/123 (30.08%), Postives = 68/123 (55.28%), Query Frame = 1
Query: 109 SETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLL 477
S+ L R+ +AL L +T ++ C ++++T +S+ CC +AE A ++ LI+ +NRSPPH+++L+ AL L+N+A H + AP + + + L R + + F+ A +L
Sbjct: 2108 SDRLGNRLTEALALLLGQKTVTGILSICRTIDVATHHSKSCCDRLAEAGAVTKILNLIQTINRSPPHEQVLKHALTILKNLAHHLHLRLRIAEAPGA-ISIITEQLHMFRYKEDIFMRAMEVL 2229
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A1U8B8T3_NELNU (abnormal spindle-like microcephaly-associated protein homolog isoform X1 n=6 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8B8T3_NELNU) HSP 1 Score: 64.7 bits (156), Expect = 4.860e-9 Identity = 42/136 (30.88%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 70 RLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDRHESFVPAARLL 477
R+R + A + + L R+ AL L + ++ ++ C L+++TR+S+ CC+++ A L++LIR+ +RS P Q++L+ AL TLRN+AR+ AL+ + +F +L R++ E + A+ LL
Sbjct: 1233 RIRVQKSAANVDDNMRLINRLVAALSELLSIRSVSSILHTCATLDMATRHSQKCCEMLVSAGAIETLLKLIRSTSRSIPDQEVLKHALSTLRNLARYPHLAEALLDTHGSIETIFWELF---RNKEEGYFIASELL 1365
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Match: A0A8C5WK03_9ANUR (Assembly factor for spindle microtubules n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5WK03_9ANUR) HSP 1 Score: 64.7 bits (156), Expect = 5.080e-9 Identity = 43/131 (32.82%), Postives = 75/131 (57.25%), Query Frame = 1
Query: 52 VAAASERLRAAELHARANPSETLSRRMEDALWTLQNGTQLTRVVRACMALELSTRYSRVCCQVVAENAAPAVLVELIRNLNRSPPHQKILRLALMTLRNVARHGGQLAALVAAPEPLVGVFVDLLQAVRDR 444
V A ERL+ +++ + L RR A+ L L+ ++ A LE++TR S VCC+++A + A V+ LIR+ NRS P ++++LA+ L N++++ G + + A E V V +DL+Q R++
Sbjct: 3147 VCALRERLQ--KVNRETKEEDKLYRRTSVAIEHLLTYKHLSYILAALQHLEVATRLSAVCCEIMARSRAVGVIFTLIRSCNRSIPCMEVIKLAVQVLLNLSKYEGTVQVVYEA-ERSVAVLLDLMQIYREK 3274 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7542.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7542.1.1 >prot_P-wetherbeei_contig7542.1.1 ID=prot_P-wetherbeei_contig7542.1.1|Name=mRNA_P-wetherbeei_contig7542.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp LQAWARGCAIRRRAAAAVAAASERLRAAELHARANPSETLSRRMEDALWTback to top mRNA from alignment at P-wetherbeei_contig7542:12..512+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7542.1.1 ID=mRNA_P-wetherbeei_contig7542.1.1|Name=mRNA_P-wetherbeei_contig7542.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig7542:12..512+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7542:12..512+ >mRNA_P-wetherbeei_contig7542.1.1 ID=mRNA_P-wetherbeei_contig7542.1.1|Name=mRNA_P-wetherbeei_contig7542.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig7542:12..512+ (Phaeothamnion wetherbeei SAG_119_79)back to top |