mRNA_P-wetherbeei_contig7531.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: A0A8J2WRH3_9STRA (Non-structural maintenance of chromosomes element 4 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WRH3_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 5.450e-21 Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 1
Query: 16 GQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVSSSYDSARFIEELRKRGLNKRTGNFDWVRYGRAVGGLFRPVPAISFMLGPLDKPVKAAK 429
GQTEEERR +R+EQR+L +RI E + ++SD F N + N+ +F KVRY RE V D + GLA A ++GA++ S A+ I + K + G DW GR GLFR P ++F GPL++PVK K
Sbjct: 44 GQTEEERRILRQEQRNLQDRIGERRAAMCALDSDEFKNQRAANNGLFKKVRYNREMVNDGDIMVGLAECAVARAGALAKSVKQYGAKDICDALKESYSNSRGEMDWAALGRDGAGLFRAPPELNFFCGPLERPVKERK 181
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: A0A6H5JT36_9PHAE (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT36_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.510e-17 Identity = 55/151 (36.42%), Postives = 84/151 (55.63%), Query Frame = 1
Query: 1 LMQDSGQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVSS-SYDSARFIEELRKR-GLNKRTGN-----FDWVRYGRAVGGLFRPVP-AISFMLGPLDKPVKAAK 429
+M +SGQT EERR++R +QR L +I+E +I D+N D LT EN + F + ++ REA D +N+K +A ++ Q+ + SS D F++ ++K G K F+W ++G V +F P FM+GPLDKP K K
Sbjct: 30 VMDESGQTNEERRELRLKQRTLKNKIIEQQADIGDLNKDACRELTEENGKQFQQTKFPREAANDAENLKLIAGSSTGQASQLGNSSVGIDGDAFLDSIKKHFGRTKGDDEQGVQTFNWAKWGSNVSMVFLAAPEGGGFMMGPLDKPAKERK 180
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: D7G069_ECTSI (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G069_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 2.720e-16 Identity = 56/151 (37.09%), Postives = 85/151 (56.29%), Query Frame = 1
Query: 1 LMQDSGQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVSS-SYDSARFIEELRKR-GLNKRTGN-----FDWVRYGRAVGGLFRPVP-AISFMLGPLDKPVKAAK 429
+M +SGQT EERR++R +QR L +I+E +I D+N D LT EN + F + ++ REA D +N+K +A +A Q+ + SS D F++ ++K G K F+W ++G V ++ P FM+GPLDKPVK K
Sbjct: 129 VMDESGQTNEERRELRLKQRTLKNKIIEQQADIGDLNKDACRELTEENGKHFKQTKFPREAANDAENLKLIAVGSAGQACQLGNSSVGIDGDAFLDSIKKHFGRTKGDDEQGVKTFNWAKWGGNVSMVYLATPEGGGFMMGPLDKPVKERK 279
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: A0A0P1AQG7_PLAHL (Non-structural maintenance of chromosomes element 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQG7_PLAHL) HSP 1 Score: 77.4 bits (189), Expect = 5.480e-14 Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 1
Query: 1 LMQDSGQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVS--SSYDSARFIEELRKR-GLNKRTGNFDWVRYGRAVGGLFRPVPAISFMLGPLD 408
+++S +E++RR +R ++R+L++ I ENAH++A ++SD F T E +++ V Y REA D N+ L AKQS A+ S + YD+ I + + + G FDW G A G FR VP F+ G +D
Sbjct: 31 FLENSQLSEKDRRHVRYKERELLQSIKENAHDLAKLSSDQFHTHTQELDQMYDSVCYPREANLDASNLDELNVAVAKQSEALGSSDLTKYDTTDLIRAAQNVCTIESQNGEFDWNTLGNAAGACFRSVPESCFLFGLMD 169
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: A0A6G0W726_9STRA (Non-structural maintenance of chromosomes element 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W726_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 6.570e-14 Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 1 LMQDSGQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVS--SSYDSARFIEELRKR-GLNKRTGNFDWVRYGRAVGGLFRPVPAISFMLGPLD 408
LM DS TEEERRQ+R +R++++ + E + E + + S F E I++KV Y REA D N+ +N KQ+G +S S + +D I +++ ++ FDW R G AVG F+ +I+FM G +D
Sbjct: 15 LMADSKITEEERRQVRCREREILQELKERSVEASQLTSTVFEEKARELDSIYSKVVYPREANLDATNLDEFSNLVVKQAGLMSASDLTKFDVGDLINTAKEKCTMDSNEAVFDWDRLGSAVGACFQSAVSINFMFGSMD 153
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: A0A1Z5KLL0_FISSO (Non-structural maintenance of chromosomes element 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLL0_FISSO) HSP 1 Score: 62.8 bits (151), Expect = 1.140e-8 Identity = 55/166 (33.13%), Postives = 76/166 (45.78%), Query Frame = 1
Query: 10 DSGQTEEERRQIRREQRDLMERIVENAHEIADINSD-------------TFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVSSSYDSARFIEELRKRGLNKRTGN--FDWVRYGRAVGGLFRPVPA-ISFMLGPLDKPVKAAKPDKPKTVKKK 459
D QT+EERR +R EQR++ + A+ T + N+E+F V Y RE V D NV LANN AKQ YD+ + I L+K+ ++ GN FDW G G + VP+ +SF G + + AAKP K + K K
Sbjct: 34 DERQTDEERRLLRVEQRNIHHVLATGAYRTRKRGGXXXXXXXXXXXXRPTLEGVRDTNNELFHHVTYTRELVLDADNVVLLANNYAKQVEQSVQVPRYDAIKVISALKKQCTMRKDGNTFFDWATLGVQTGVCYNAVPSKVSFAAGKYEVGI-AAKPKKAREAKVK 198
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: A0A7S2LXM8_9STRA (Non-structural maintenance of chromosomes element 4 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXM8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.910e-7 Identity = 46/156 (29.49%), Postives = 74/156 (47.44%), Query Frame = 1
Query: 1 LMQDSGQTEEERRQIRREQRDLMERIVENAHEIADI-----------------NSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVSSSYDSARFIEELRKRGLNKRTG--NFDWVRYGRAVGGLFRPVPA-ISFMLGPLD 408
+M SGQT+ +RR +RR QR+L+ I +A + +N+E++ VRY REAV D +N+ +++ AA++ + YD+ + L K+G + G F+W G VG F +P+ SF+ GPLD
Sbjct: 56 IMTASGQTDADRRVLRRRQRELLNDISFDAPAAXXXXXXXXXXXXXXXXNEKPKQSGLRSWREKNNELWDNVRYTREAVLDSENMDLISSKAAREVEKIIQVPRYDAITLAQNLVKKGSTRTGGINQFNWAGLGFQVGVCFSSLPSNCSFLYGPLD 211
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: G4YQD1_PHYSP (Nse4_C domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YQD1_PHYSP) HSP 1 Score: 57.8 bits (138), Expect = 8.980e-7 Identity = 43/140 (30.71%), Postives = 67/140 (47.86%), Query Frame = 1
Query: 1 LMQDSGQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVSSSYDSARF----IEELRKRGLNKRTGNFDWVRYGRAVGGLFRPVPAISFMLGPLD 408
L+ DS ++++RRQ+R QR+L++ + E E+ +NSD F + E++ V Y RE D + L KQS +S + D +F + R + FDW G AVG F+ VP + + G LD
Sbjct: 2147 LLTDSNLSDQDRRQVRYMQRELLQGMKEQEEELRSLNSDKFDAAAGDVDELYQHVHYPREGNLDSLCLDELETAVGKQSKMLSGT---DMTKFKALDLINAGSRECTTASTEFDWDGLGVAVGSCFQSVPDTNVLFGRLD 2283
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: K0RA50_THAOC (Non-structural maintenance of chromosomes element 4 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RA50_THAOC) HSP 1 Score: 56.6 bits (135), Expect = 1.970e-6 Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 1
Query: 1 LMQDSGQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVSSSYDSARFIEELRKRGL------NKRTGNFDWVRYGRAVGGLFRPVPA-ISFMLGPLD 408
LM SGQT +ER+Q+RR+ L + +++++ +DI N +E+ VRY+REA +D N LA +A Q+ + YD+ R + K+G ++R FDW G G F +P +SF GP++
Sbjct: 23 LMTLSGQTHQERQQLRRDFTALQQ-LIKSSPLQSDIRPQQLRN-----NELNESVRYIREAKKDASNSSLLAERSALQAENMITVPRYDAVRLAQMASKKGAVLQTPGDRRDYRFDWQGLGLQAGVCFSSLPTGVSFPNGPIE 159
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Match: UPI000645109C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000645109C) HSP 1 Score: 55.1 bits (131), Expect = 6.420e-6 Identity = 40/135 (29.63%), Postives = 68/135 (50.37%), Query Frame = 1
Query: 19 QTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIFTKVRYVREAVEDMQNVKGLANNAAKQSGAVSVS-SSYDSARFIEELRKRGLNKRTGNF----DWVRYGRAVGGLFRPVPAISFMLGPLD 408
QT ERRQIRRE R L++ ++ ++ + L + +I+++V++ REA D + + + +QS V+ +S+DS FI +R + N W R+G+AV + VP FM GP++
Sbjct: 157 QTTNERRQIRREYRLLIQDTQSKRQDLIQPENNGLSELLKKGEDIYSRVQHPREAALDSELLSLASQLGLEQSQKFKVTFNSFDSEGFITRVRDHLMQLSEDNDVNEQGWNRFGQAVNEHYNTVPEFDFMYGPMN 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7531.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7531.1.1 >prot_P-wetherbeei_contig7531.1.1 ID=prot_P-wetherbeei_contig7531.1.1|Name=mRNA_P-wetherbeei_contig7531.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp MQDSGQTEEERRQIRREQRDLMERIVENAHEIADINSDTFANLTSENHEIback to top mRNA from alignment at P-wetherbeei_contig7531:881..1501- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7531.1.1 ID=mRNA_P-wetherbeei_contig7531.1.1|Name=mRNA_P-wetherbeei_contig7531.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig7531:881..1501- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7531:881..1501- >mRNA_P-wetherbeei_contig7531.1.1 ID=mRNA_P-wetherbeei_contig7531.1.1|Name=mRNA_P-wetherbeei_contig7531.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig7531:881..1501- (Phaeothamnion wetherbeei SAG_119_79)back to top |