mRNA_P-wetherbeei_contig750.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig750.1.2
Unique NamemRNA_P-wetherbeei_contig750.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: A0A1S3IIJ2_LINUN (uncharacterized protein LOC106164359 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IIJ2_LINUN)

HSP 1 Score: 217 bits (552), Expect = 4.590e-65
Identity = 119/260 (45.77%), Postives = 168/260 (64.62%), Query Frame = 1
Query:    1 GLRDPTKLSAEDLG---GAKAIKASMGSPELAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVFPGGDFKKITGKDSITVEAWAETAKGGF 771
            G+RDP+K  AE L    G   +KA MG+ +L E L  +  + + IVTPGS+DRA+  V + EA KKA VKH++VVSV+TA    T+FG QF+ +E    +  + ++ +RLP+F+DNY+ F ESIK Q +IY P DPA  ++ + V+D+G A A I   PK HAGKTY L    H++++V  A  +A GKE+TY +VPY+ AK AFL  G+PEWQ DGLLEL+K +D+G     P    K++TGK+  T+  W ++    F
Sbjct:   64 GVRDPSK--AEKLTAIKGVTVVKAEMGAEDLEEVL--KGVDALFIVTPGSEDRAQKAVATAEAAKKAQVKHLLVVSVLTADKTDTIFGKQFSEIESTIAKMDVPFSFLRLPMFVDNYFLFKESIKDQGAIYSPADPAQSYTPVVVKDVGLAAAVILSDPKDHAGKTYTLCGDKHSFSDVATAFGEALGKEVTYSQVPYEDAKTAFLEKGFPEWQVDGLLELYKTIDDGTHTGDPD-QLKEVTGKEPTTLNDWVKSVAENF 318          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: A0A7S2ZBL5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBL5_9RHOD)

HSP 1 Score: 208 bits (529), Expect = 5.810e-62
Identity = 108/250 (43.20%), Postives = 157/250 (62.80%), Query Frame = 1
Query:    1 GLRDPTKLSA-EDLGGAKAIKASMGSPELAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVFPGGDFKKITGKDSITVEAW 747
            G+R+P   +A  +L G + +KA MG P LA +L     + + IV+PG  DRA L +K++++   AGVKHV+VVSV+ AG   ++FG QF  VE   K     WT++RLP+F++NYW F +SI  Q++IYCPVD   P++    +D G   AKI  +P  H   TY +    HT+ EV  A +   GKEI+YV+VPY++AK+AF+GMG+PEWQ DG++EL+  +DEG   +   GD++ + G     V  W
Sbjct:   37 GVRNPEAATALAELPGIELVKAEMGDPGLAASLVG--IDCLFIVSPGVADRAPLVLKTMKSASTAGVKHVMVVSVLNAGT-DSIFGRQFKFVEDGIKLLAFDWTILRLPLFMENYWAFKDSIVSQSAIYCPVDRTAPYTPTVAEDAGKLAAKIMCNPAPHTEMTYKVTAPSHTFGEVADAFSNELGKEISYVQVPYESAKQAFMGMGFPEWQADGIMELYHGIDEGAAYLNDAGDYEAVMGAKQADVATW 283          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: F2U3M1_SALR5 (NmrA domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U3M1_SALR5)

HSP 1 Score: 197 bits (500), Expect = 1.280e-57
Identity = 109/258 (42.25%), Postives = 156/258 (60.47%), Query Frame = 1
Query:    7 RDPTKLSAEDLGG--AKAIKASMGSPELAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVF-PGGDFKKITGKDSITVEAWAETAKGGF 771
            RDP+   A+ L       +K  M  P   + +  +K + V +VTPG  +R +L +  ++A K+ G K V+VVSV+T G   ++FG QF  +EK  +ECG+ ++LVRLP FIDN +G  E+IKG    Y P  P + F+ +AV D+G A A I   P  HA   Y+L + P T+ ++ A  +KA GK + YV+VPY AAK++F+ +G PEWQ DG+LELF+  D   K+   P  D KKITG D +  EAW ++ KG F
Sbjct:   37 RDPSSDKAKALAADNVMVVKGDMSDPASLDNII-QKDDAVFVVTPGHIERTKLAIAGVDAAKRNGAKFVLVVSVLTTGT-DSIFGRQFAPLEKHVQECGIPYSLVRLPFFIDNAFGNQEAIKG-GKYYAPAKPDVVFTPVAVADVGEACAAILADPSKHANTIYSLTSKPMTHKDIVAGFSKALGKPVEYVQVPYDAAKKSFMDLGMPEWQVDGVLELFRYFDASAKVTNNPTDDIKKITGHDPLDAEAWMKSVKGAF 291          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: UPI001F033920 (quinone oxidoreductase 2-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F033920)

HSP 1 Score: 194 bits (494), Expect = 1.100e-56
Identity = 102/260 (39.23%), Postives = 160/260 (61.54%), Query Frame = 1
Query:    1 GLRDPTKLSA-EDLGGAKAIKASMGSPELAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVFPGG--DFKKITGKDSITVEAWAETAKGGF 771
            G+R+P K    + L     ++A MG  E  +    +  + + IV PG+++RA+L + + +A K+AGVKH++V+SV TA +  T FG QF  +E    + G+ +T +RLP+F+DNY+ +  +IK  ++ Y PVD + P++ + V D G A A I  SP+ H GKTYN+V+  HT+ ++  A +   GKEI YVRVPY  AK AF+ MG+P+WQ +G++EL++++D G   V      D+  ITGK   +++AW     G F
Sbjct:   36 GVRNPEKAEELKSLPSVSVVQAEMGQIEKLKTTL-KGVDALYIVCPGTENRAQLSIDTAKAAKEAGVKHLLVLSVATADLTYTTFGKQFKKIETEIAKLGVPYTYLRLPLFVDNYFAYQGTIKSDSACYGPVDSSKPYTPVVVGDAGIAAATILSSPQQHEGKTYNVVSDRHTFGDMAKAFSDNLGKEIKYVRVPYADAKAAFMQMGFPDWQAEGVMELYRLIDSGSPQVNQASLNDYTTITGKQPTSLKAWVSQVAGAF 294          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: A9VDD8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VDD8_MONBE)

HSP 1 Score: 192 bits (489), Expect = 5.660e-56
Identity = 111/261 (42.53%), Postives = 157/261 (60.15%), Query Frame = 1
Query:    1 GLRDPTKLSAEDLGGAKAIKASMGSPELAEALAAE--KAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPH-TYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVF-PGGDFKKITGKDSITVEAWAETAKGGF 771
            G+RDP+   A+ L     I+ +      AE + AE   A+ V I+TPG  DR ++ + +++A K AG K++VVVS  TA    + FG Q   VE   K  G+A+ ++RLP+FIDN+WG A  IKG   IY PV P   +  IAV+DIG A A I  +P+ H  K Y L +  + ++AE+    + A G++I YV+VPY+AA++AF+ +G PEWQ  G++EL+K +D G KMV  P  DFK ITG D    + W E  KG F
Sbjct:   33 GVRDPSAEKAQSLKAGDNIQLTKIDMNDAENMKAEFKNADAVYIITPGHIDRTKITIGAIDAAKAAGAKYIVVVSFPTAHS-DSCFGKQIGPVEDHLKASGVAYAILRLPMFIDNFWGLAAGIKGDNKIYAPVKPEAAYCPIAVEDIGLASATILANPEKHQNKIYTLTSAKNISHAEIAKVFSDALGRQIDYVQVPYEAAQKAFMDIGLPEWQAAGVMELYKYVDAGDKMVTTPTSDFKDITGNDPKGFKEWLEPVKGAF 292          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: A0A7S0ALL8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ALL8_9STRA)

HSP 1 Score: 191 bits (484), Expect = 5.410e-55
Identity = 114/261 (43.68%), Postives = 153/261 (58.62%), Query Frame = 1
Query:    1 GLRDPTKLSAEDLGGAKAIKASMGSP-ELAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVFPG--GDFKKITGKDSITVEAWAETAKGGFM 774
            G+RDP+K   E + G   IKA + +  EL   L  +  +   IVTPG  DR +L +  LEA + AGV  V VVSV+T G   ++FG QF  +E  AK+  +  +++RLP+FIDN W  AESIKG+ + Y P DP    +A+AV D+G A A I   P+ H   TY LV+ P +  ++ AA   A GK  T   VPY AAKEAF+G G+PEWQ DG+LELF  +D   K+      GD   ITG+ +  +  WA+   GGFM
Sbjct:   56 GVRDPSKF--ESVLGVTPIKADLNNKAELTTLL--KDFDRAFIVTPGHSDRTKLAINGLEAAEDAGVGFVAVVSVLTCGT-DSIFGKQFAPIEAKAKDLTIPTSILRLPLFIDNNWLNAESIKGRGTFYDPRDPTKKHTAVAVADVGKAAADILALPEKHVKTTYKLVSPPFSLNDLAAAFTTALGKNTTVTTVPYNAAKEAFMGNGFPEWQVDGILELFHYIDNESKLTNEKNTGDIASITGEKATAITEWAKQVAGGFM 311          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: A0A1X7U092_AMPQE (NmrA domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U092_AMPQE)

HSP 1 Score: 184 bits (466), Expect = 1.630e-52
Identity = 102/261 (39.08%), Postives = 159/261 (60.92%), Query Frame = 1
Query:    1 GLRDPTKLSAEDLGGAKAIKASMGSPE-LAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVFPGGD---FKKITGKDSITVEAWAETAKGGF 771
            G R+P K+ A        +KA +G  + L E L  +  +V+ IVTPG++DRA L +++ EA K+AGVK ++VVSV T  +  T+FG Q + +E    + G+ ++ +RLP+F++N WG  ++I  Q++ Y P  P  P   IAV+D   A A I  +   H GK Y + +  +  AE+ AA  +A GKE+ +V+VP +AAK+A +G GWPEWQ DG+LEL K+++EG  ++  G D    K +TG++  +++AW      GF
Sbjct:   37 GARNPDKIPARP--NVTVVKAVLGDKDQLKEPL--KGVDVLYIVTPGAEDRASLTIRTAEAAKEAGVKFILVVSVPTVILPDTIFGKQLSEIEDKVSKLGIPYSFLRLPMFVENIWGSKDTIVSQSAFYAPQSPDKPAIYIAVEDAAKAGAAILANYSKHNGKGYTIQSDRYANAELAAAFTEALGKEVKFVQVPPEAAKQAMVGKGWPEWQVDGILELLKLIEEGAPVLTAGDDGQALKSLTGEEPTSMKAWVTKNAPGF 293          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: A9URK2_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9URK2_MONBE)

HSP 1 Score: 190 bits (482), Expect = 1.600e-51
Identity = 108/258 (41.86%), Postives = 155/258 (60.08%), Query Frame = 1
Query:    1 GLRDPTKLSAEDLGGAKAIKASMGSPELAEALAAE--KAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPH-TYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKMVF-PGGDFKKITGKDSITVEAWAETAK 762
            G+RDP+   A+ L     I+ +      AE + AE   A+ V I+TPG  DR ++ + +++A K AG K++ +VS  TA    + FG Q   VE   K  G+ + ++RLP+FIDN+WG A  IKG   IY PV P   +  I+V+DIG A A I   PK H  KTY L T  +  +A++    ++  G++I YV+VPY+AAK+AF+ +G PEWQ DG++EL+K +D G KMV  P  DFKKI GK++   + W E  K
Sbjct:   33 GVRDPSAEKAQPLKAGDNIELTKIDMNDAENMKAEFKGADAVYIITPGHIDRTKITIGAIDAAKAAGAKYIAIVSFPTA-YSDSCFGKQIGPVEDHLKASGVTYAILRLPMFIDNFWGLAAGIKGDNKIYAPVKPEAAYCPISVEDIGLASATILAHPKKHKNKTYTLTTPKNIAHADIAKVFSEVLGRQIDYVQVPYEAAKKAFMDLGVPEWQADGVMELYKYVDSGDKMVTTPTKDFKKIVGKEAKGFKQWLEPVK 289          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: A0A813B363_9DINO (PadA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B363_9DINO)

HSP 1 Score: 178 bits (452), Expect = 3.730e-51
Identity = 92/223 (41.26%), Postives = 135/223 (60.54%), Query Frame = 1
Query:  109 AEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGK-MVFPGGDFKKITGKDSITVEAWAETAKGGFM 774
            A  V +++PG+ +R ++   +++     G   VVVVSV T      +F  QF  VE+  K     +T++RLP+FIDN W +  SIK Q  I+ PV+P    + IAV DIG A A +  +P  H GKTY L T P++  E+  A ++A GK + YV+VP++AAK+A LG+G PEWQ DG++EL +  D+G K +V    DFK I G++ +T++ W    KGGF 
Sbjct:   14 AHSVFVISPGAFEREKITKAAIDGALAGGAGSVVVVSVATTDEQDHLFAKQFLPVEEHLKAATDKYTILRLPIFIDNNWAYVGSIKEQGKIHGPVNPDRKLAPIAVSDIGEAAAIVLRNPAEHTGKTYTLTTTPYSTKELAEAFSEALGKPVEYVQVPFEAAKQAMLGLGLPEWQADGIVELLQKQDKGDKAIVTKTEDFKTIVGREPLTIQQWTAAVKGGFQ 236          
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Match: UPI001BB25A84 (uncharacterized protein LOC121425586 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB25A84)

HSP 1 Score: 181 bits (460), Expect = 3.870e-51
Identity = 99/263 (37.64%), Postives = 157/263 (59.70%), Query Frame = 1
Query:    1 GLRDPTKLSA---EDLGGAKAIKASMGSPE-LAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVVSVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIKGQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHTYAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMMDEGGKM--VFPGGDFKKITGKDSITVEAWAETAKGGF 771
            G+R+ +   A   ++L G   + A+MG  E L   L  +  +V+ +  P ++DR ++ ++++EA K+AGV HV+VVS     +   +FG QF  +E AAK  GM +T++RLP+F+DN +   + I GQ+ IY P++   P+  + V DIG A A I  S + H   TY L +   TY E+    ++A G+EI +V+VPY+A K+AF+ +G PEWQ +G ++L ++++EG     +   GDFKKITGKD   ++ W    K  F
Sbjct:   74 GVRESSMAKASPLQELPGVTVVSAAMGDKENLVSTL--KGVDVMFVTVPPTEDRGDISIRTMEAGKQAGVNHVIVVSFPAVDL-DILFGRQFKPIESAAKSLGMTYTILRLPMFVDNLFMAKDGIVGQSKIYSPMESDKPYCPVVVNDIGVAAATIMASYEKHENTTYTLTSTRFTYRELAVLFSEALGREIVHVQVPYEAGKQAFVDIGMPEWQGEGAMDLVRLVNEGSPAADIADMGDFKKITGKDPTDIKTWVNQVKDAF 333          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig750.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S3IIJ2_LINUN4.590e-6545.77uncharacterized protein LOC106164359 n=1 Tax=Lingu... [more]
A0A7S2ZBL5_9RHOD5.810e-6243.20Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
F2U3M1_SALR51.280e-5742.25NmrA domain-containing protein n=1 Tax=Salpingoeca... [more]
UPI001F0339201.100e-5639.23quinone oxidoreductase 2-like n=1 Tax=Xenia sp. Ca... [more]
A9VDD8_MONBE5.660e-5642.53Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S0ALL8_9STRA5.410e-5543.68Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A1X7U092_AMPQE1.630e-5239.08NmrA domain-containing protein n=3 Tax=Amphimedon ... [more]
A9URK2_MONBE1.600e-5141.86Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A813B363_9DINO3.730e-5141.26PadA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
UPI001BB25A843.870e-5137.64uncharacterized protein LOC121425586 n=1 Tax=Lytec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig750contigP-wetherbeei_contig750:1920..4456 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog946362.XP_004996398.1
PFAMsNmrA
Model size987
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons8
Evalue8.16e-59
EggNOG OGsCOG0702@1|root,2RYAX@2759|Eukaryota,3A0S2@33154|Opisthokonta
DescriptionNAD(P)H-binding
Cds size711
COG categoryGM
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig750.1.2prot_P-wetherbeei_contig750.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig750 2217..4246 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186985.278869-UTR-P-wetherbeei_contig750:1919..19521683186985.278869-UTR-P-wetherbeei_contig750:1919..1952Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig750 1920..1952 +
1683186985.2879744-UTR-P-wetherbeei_contig750:2183..22161683186985.2879744-UTR-P-wetherbeei_contig750:2183..2216Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig750 2184..2216 +
1683186985.369998-UTR-P-wetherbeei_contig750:4246..44561683186985.369998-UTR-P-wetherbeei_contig750:4246..4456Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig750 4247..4456 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186985.2965999-CDS-P-wetherbeei_contig750:2216..22941683186985.2965999-CDS-P-wetherbeei_contig750:2216..2294Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig750 2217..2294 +
1683186985.3081012-CDS-P-wetherbeei_contig750:2562..27081683186985.3081012-CDS-P-wetherbeei_contig750:2562..2708Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig750 2563..2708 +
1683186985.316587-CDS-P-wetherbeei_contig750:2904..30431683186985.316587-CDS-P-wetherbeei_contig750:2904..3043Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig750 2905..3043 +
1683186985.3258195-CDS-P-wetherbeei_contig750:3247..33251683186985.3258195-CDS-P-wetherbeei_contig750:3247..3325Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig750 3248..3325 +
1683186985.3374655-CDS-P-wetherbeei_contig750:3512..35811683186985.3374655-CDS-P-wetherbeei_contig750:3512..3581Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig750 3513..3581 +
1683186985.351291-CDS-P-wetherbeei_contig750:3847..39041683186985.351291-CDS-P-wetherbeei_contig750:3847..3904Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig750 3848..3904 +
1683186985.3616636-CDS-P-wetherbeei_contig750:4102..42461683186985.3616636-CDS-P-wetherbeei_contig750:4102..4246Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig750 4103..4246 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig750.1.2

>prot_P-wetherbeei_contig750.1.2 ID=prot_P-wetherbeei_contig750.1.2|Name=mRNA_P-wetherbeei_contig750.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp
MGSPELAEALAAEKAEVVVIVTPGSQDRAELDVKSLEACKKAGVKHVVVV
SVVTAGVVGTVFGDQFTTVEKAAKECGMAWTLVRLPVFIDNYWGFAESIK
GQASIYCPVDPAMPFSAIAVQDIGTALAKIALSPKSHAGKTYNLVTVPHT
YAEVTAAIAKATGKEITYVRVPYQAAKEAFLGMGWPEWQTDGLLELFKMM
DEGGKMVFPGGDFKKITGKDSITVEAWAETAKGGFM*
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mRNA from alignment at P-wetherbeei_contig750:1920..4456+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig750.1.2 ID=mRNA_P-wetherbeei_contig750.1.2|Name=mRNA_P-wetherbeei_contig750.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2537bp|location=Sequence derived from alignment at P-wetherbeei_contig750:1920..4456+ (Phaeothamnion wetherbeei SAG_119_79)
GGCCTGCGCGATCCCACCAAACTCTCGGCCGAGGTAAAGTGAGGACAAGG AGACTCATTTGAATTCCTTTTCTTGTTGGTCCCCTTTGCATGCGTAAACT TGTTACAAACCCAGAGGGAAAGGTGTTGCCGCAATGTGCCCGAAACCTGG GCGTAAAACGTCTTAGGCGGAAAGCATTAATGAGTGCAACGATTCGCACC TTTGCCTGTGCCCCTCGTGCCCTCCCTTGTTCACATCGAAAAACGGCCCC GCGGACCCTGGCAGGACCTGGGCGGCGCCAAGGCCATCAAGGCGAGCATG GGCAGCCCGGAGCTGGCAGAGGCTCTCGCGGCGGAGAAGGCTGAGGTGGT TGTCATCGTCACGCCCGGCTCGCAGGTACAAATGTTTGAGCATTTTCTGC TGTTTCGCGTTATGTGGGCGTGGTTCTTGAGGCTGTCGGCAATCTGGTTG AGTGCCATGCACGAATGTGTAATGATATCCGCAGCTTTTGGCCGGCGAGC TCTGCTGCGGCTCACAAGCAAGCATCAAAAGAGACGGCGGCAATTGTGCA GAATCGCTTGCTCTTTTTCGAACCTTCTCCTCCCTCGTTTATAATATTTC AAATCAGCGGCTGCTTTCTGTGTCCCAAACAAATTGTCCTCAGGACCGCG CCGAGCTGGACGTGAAGTCGCTGGAGGCGTGCAAGAAGGCCGGCGTGAAG CACGTCGTCGTCGTGTCCGTCGTTACGGCGGGCGTGGTGGGCACCGTCTT CGGGGACCAGTTCACGACGGTCGAAAAGGCCGCCAAGGAGTGAGTTTTGT TTCCTTGTTTCGCAGCCGAGTGGGAAGCACGGCCAAGTGAACGGAGGGCA TTCCGCGGAAAACGGGAGAAGGAACGCCGCTGGTAAGTTTCTAACTTCGA AGGGTCTCCTGCACCGTTGCGCCGCCCGGTCTTCCGCACCATTGCACCGC CCGGTCTCTCCCATCACCTGGGGGAATCCTTATAGGTGCGGCATGGCGTG GACGCTCGTACGCCTGCCAGTCTTCATCGATAACTACTGGGGCTTCGCCG AGAGCATCAAGGGGCAGGCCTCCATTTACTGCCCCGTCGACCCCGCCATG CCCTTTTCTGCCATTGCCGTTCAGGTAGGGCGTCCTCTAATGCGATTCGG CCGTGACCCCCCGTTCGAAGCGAATCAGGCCGGAAGAGCGTCACCGTGTT GGGCAGCGCACGGATGAAACGAGCGCTCTCCGCCTGATTGCAATCTGCAT CTCCTCGCCTTTACATCCTTCTGCCGCCGCCGCCGCCGCCGCCGCTGCCG GTGCCTCTGCGACGATCTCGACCATCAGGACATTGGGACGGCGCTGGCGA AGATCGCGCTGTCGCCGAAGAGCCACGCCGGCAAGACTTACAACCTTGTG ACCGTGGTGTGTCAGGAGACTATGGATAGCGAATGCAGGGTTTCATTTCT CCATTTCGTCCCCTTGTTCCATTGGACGCTTATAATGCGGGTCACAACTG AAGGGGCCGCTCGGTCTTCCTCTGATGCACTTTAACTTACTTTCTACTGC TCGATTTGCTCCCTCTGCCTCTCACACTTACCATGTCTCTCAGCCACACA CCTATGCCGAAGTGACTGCGGCCATCGCCAAGGCCACTGGCAAGGAGATC ACCTACGTGCGGGTGGGTGTCACCTCCATACTCACTTCATTTTGTGTGAT GGTAGCCTTCGGTTTACATTTCCTTTTAGACCACCAGTCTAAGGCGTTTG TTTTGGGTTCAAGATGGCACACAGTTGCTCCATAGAATGTGCCCAGTATG GCGAGGTACGTCCGTTTCATATGTCGCCGCGCCTATCTTTGCTTTGAATG TCATGCTTTCGTCTTTCTGCTTTCTGCTGCCTCCTCTGCTTTCTCCTCTG CTCGCTCCTGCGGCGGTCGTGGAAGCAGGTGCCGTATCAGGCGGCTAAAG AGGCGTTCCTGGGGATGGGCTGGCCCGAGTGGCAGGTGAGCAGAAAGAGG AGGAGCGGCTGAGCCGTTCTGCTGCGTCGTTCGGTTGTTTTTCTGACATA TGAAGCCCTGCGATGCGTGAAAGCCTTCCTGCTTTCTTCTGAACCATAAG ACGATGGCCCCTGCGAATTCTCTTTTTGTTCTGACCTACCATTACTCCTT CCGCCGGCTTCCCTCCCTGTCTCCTTTTTGCAGACGGACGGCCTCTTGGA GCTCTTCAAGATGATGGACGAAGGCGGCAAGATGGTGTTCCCCGGCGGCG ACTTCAAGAAGATCACGGGCAAGGACTCCATCACCGTGGAAGCCTGGGCC GAGACCGCCAAGGGCGGCTTCATGTGAAGAGACGGCGGCGGGCGGCGATG GGGGGTTGGAACCAGGCAGGGTCTTTTTGTGCTGGGGCGCGGTCGGGAGT AGGAATGCGGGGTTTCTTAAACGGCGATGGTGTTTGGGAGGGACGGGAGA ATTCAAAGGGGGGCTTGCAGCTCTCCCACGGCGAGAATCGTTGTGGCGGC GGCAGCGGACGGACAGTCGGAGTAAAGGTGTGATGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig750:1920..4456+

>mRNA_P-wetherbeei_contig750.1.2 ID=mRNA_P-wetherbeei_contig750.1.2|Name=mRNA_P-wetherbeei_contig750.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig750:1920..4456+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCAGCCCGGAGCTGGCAGAGGCTCTCGCGGCGGAGAAGGCTGAGGT
GGTTGTCATCGTCACGCCCGGCTCGCAGGACCGCGCCGAGCTGGACGTGA
AGTCGCTGGAGGCGTGCAAGAAGGCCGGCGTGAAGCACGTCGTCGTCGTG
TCCGTCGTTACGGCGGGCGTGGTGGGCACCGTCTTCGGGGACCAGTTCAC
GACGGTCGAAAAGGCCGCCAAGGAGTGCGGCATGGCGTGGACGCTCGTAC
GCCTGCCAGTCTTCATCGATAACTACTGGGGCTTCGCCGAGAGCATCAAG
GGGCAGGCCTCCATTTACTGCCCCGTCGACCCCGCCATGCCCTTTTCTGC
CATTGCCGTTCAGGACATTGGGACGGCGCTGGCGAAGATCGCGCTGTCGC
CGAAGAGCCACGCCGGCAAGACTTACAACCTTGTGACCGTGCCACACACC
TATGCCGAAGTGACTGCGGCCATCGCCAAGGCCACTGGCAAGGAGATCAC
CTACGTGCGGGTGCCGTATCAGGCGGCTAAAGAGGCGTTCCTGGGGATGG
GCTGGCCCGAGTGGCAGACGGACGGCCTCTTGGAGCTCTTCAAGATGATG
GACGAAGGCGGCAAGATGGTGTTCCCCGGCGGCGACTTCAAGAAGATCAC
GGGCAAGGACTCCATCACCGTGGAAGCCTGGGCCGAGACCGCCAAGGGCG
GCTTCATGTGA
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