mRNA_P-wetherbeei_contig7488.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7488.1.1
Unique NamemRNA_P-wetherbeei_contig7488.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: Q551V8_DICDI (Guanylyl cyclase n=2 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q551V8_DICDI)

HSP 1 Score: 124 bits (311), Expect = 3.220e-30
Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
Query:   10 QMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLS-VRNGGAPGVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            Q +V +H+G VRQF+VDDKGC+LI  +GVP +SH++DP   V   +  V N     V +SVGITTG+ FCG VG+++RREYA+VGD +N+AARL        + DEET K  ++ IE+  +   + +KG+  P  VY+P
Sbjct: 1316 QAIVYKHEGTVRQFIVDDKGCVLIAAWGVPPYSHEDDPSRAVEAAMEIVVNVFKLAVISSVGITTGKCFCGDVGSDERREYAVVGDIVNLAARLMSHSQGGVLCDEETSKTAKM-IEFVKLANPIKVKGKVAPINVYKP 1453          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: F0ZMV7_DICPU (Uncharacterized protein SgcA n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZMV7_DICPU)

HSP 1 Score: 124 bits (310), Expect = 4.380e-30
Identity = 63/139 (45.32%), Postives = 92/139 (66.19%), Query Frame = 1
Query:   10 QMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLS-VRNGGAPGVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            Q +V +H+G +RQF+VDDKGC+LI  +GVP +SH++DP   V   +  V N     V +SVGITTG+ FCG VG+++RREYA+VGD +N+AARL        + DEET+K  ++ IE+  +   + +KG+     VY+P
Sbjct: 1325 QNIVYKHEGTIRQFIVDDKGCVLIAAWGVPPYSHEDDPSRAVEAAMEIVVNVFKHAVISSVGITTGKCFCGDVGSDERREYAVVGDTVNLAARLMSHSQGGVLCDEETFKTAKM-IEFVKLSNPIKVKGKTSLINVYKP 1462          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: F4QCJ5_CAVFA (Guanylyl cyclase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QCJ5_CAVFA)

HSP 1 Score: 122 bits (305), Expect = 2.050e-29
Identity = 61/142 (42.96%), Postives = 93/142 (65.49%), Query Frame = 1
Query:    1 AQLQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLSVRNGGAP-GVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            +++Q +V R++G VRQF+VDDKGC+LI  +GVP  SH++DP   V   + +  G     V ++VG+TTG+ FCG VG+++RREYA+VGD +N++ARL        +VDEET KL    IE+  +   + +KG+     V++P
Sbjct: 1051 SEIQTIVYRYEGTVRQFIVDDKGCVLIAAWGVPPLSHEDDPSRAVEAAMEIVVGLFKLKVISTVGVTTGKCFCGDVGSDERREYAVVGDIVNLSARLMSHGQGGVLVDEETSKLASRKIEFVKLSDPIKVKGKQTSVNVFKP 1192          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: A0A8J4UZ03_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZ03_9MYCE)

HSP 1 Score: 121 bits (303), Expect = 3.820e-29
Identity = 62/141 (43.97%), Postives = 95/141 (67.38%), Query Frame = 1
Query:    4 QLQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLS-VRNGGAPGVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            ++Q +V +++G +RQF+VDDKGC+LI  +GVP +SH++DP   V   +  V N     V ++VG+TTG+ FCG VG+++RREYA+VGD +N+AARL        + DEET+K T   IE+  +   + +KG++K   VY+P
Sbjct: 1093 EVQTIVYKYEGTIRQFIVDDKGCVLIAAWGVPPYSHEDDPSRAVEASMEIVVNLFKLQVISTVGVTTGKCFCGDVGSDERREYAVVGDMVNLAARLMVHSQGGVLCDEETFK-TAKKIEFVKLANPIKVKGKSKLINVYKP 1232          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: UPI000644D234 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D234)

HSP 1 Score: 117 bits (292), Expect = 1.130e-27
Identity = 59/142 (41.55%), Postives = 95/142 (66.90%), Query Frame = 1
Query:    1 AQLQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLS-VRNGGAPGVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            +Q Q +V +++G VRQF++DDKGC+LI C+G+PG SH++DP   V   +  V N     V ++VG+TTG+ FCG VG+++RREYA+VGD +N++ARL        + DEET +  R +IE+  + + + +KG+     +++P
Sbjct:  358 SQTQTIVYKYEGTVRQFIIDDKGCVLIACWGMPGVSHEDDPSRAVEAAMEIVVNLFKLKVISTVGVTTGKCFCGDVGSDERREYAVVGDIVNLSARLMSHSQGGVLCDEETSRNAR-NIEFVRMTEPIKVKGKTTLIPLFKP 498          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: A0A6B2KWP3_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KWP3_9EUKA)

HSP 1 Score: 114 bits (286), Expect = 7.300e-27
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 1
Query:    4 QLQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLSVRNGGAP-GVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKL----TRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            Q+Q  V  ++G VRQF+ DDKG +LI CFGVP F+H+++    V  GL +        V+ S+GITTG+VFCG VG   RREYA+VGD +N++ARL          D+ETYKL    T     ++     + +KG++ P  VY P
Sbjct:  261 QMQQAVYEYEGTVRQFLFDDKGSVLIACFGVPPFAHEDNQYRAVKTGLKIHKELLQLNVKNSIGITTGKVFCGTVGTANRREYAVVGDVVNLSARLMAAAKGRVWCDQETYKLCCDQTSSQAPFNTNLPEITVKGKSFPIQVYEP 405          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: UPI0016833846 (AAA family ATPase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016833846)

HSP 1 Score: 114 bits (285), Expect = 9.850e-27
Identity = 55/140 (39.29%), Postives = 87/140 (62.14%), Query Frame = 1
Query:    7 LQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLSVRNGGAP-GVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            +Q  + +++G   +F+VDDKG IL+  FG+P +SH++D   G+   L ++      G+R ++GITTGRV+CG VG+E RREY M+GD +N AARL     D+ + D  TY+       +D     + +KG+ +P ++YRP
Sbjct:  306 VQTNLYQYEGSFNKFLVDDKGSILVAAFGLPPYSHEDDAVRGIQAALKIQAALRELGLRPNIGITTGRVYCGAVGSESRREYTMLGDVVNAAARLMQAAKDEILCDRPTYEAAGSRFSFDA-GSAIYVKGKVEPIVIYRP 444          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: A0A6I5QXP5_9CYAN (AAA family ATPase n=1 Tax=Leptolyngbya sp. SIO1E4 TaxID=2607768 RepID=A0A6I5QXP5_9CYAN)

HSP 1 Score: 114 bits (284), Expect = 1.340e-26
Identity = 55/142 (38.73%), Postives = 93/142 (65.49%), Query Frame = 1
Query:    1 AQLQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLSVRNGGAP-GVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            A LQM++ +++G++ +F+VDDKG I+++ FG+P ++H++D   GV   +++R      G++  +GITTGRV+CG +G + RREY ++GD +N+AARL      D + D+ TY  TR  +  + +   + +KG+  P  VYRP
Sbjct:  289 AGLQMVLQQYEGVLNKFLVDDKGSIIVMGFGLPPYAHEDDAIRGVQAAIALRAQLLQLGLQPRIGITTGRVYCGAIGGDLRREYTVLGDTVNLAARLMQASQQDILCDQTTYLATRSHLMLESL-PAIGVKGKTAPITVYRP 429          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: D3BBR1_POLPP (Guanylyl cyclase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BBR1_POLPP)

HSP 1 Score: 114 bits (284), Expect = 1.380e-26
Identity = 58/141 (41.13%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    4 QLQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLS-VRNGGAPGVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            ++Q +V +++G VRQF++DDKGC+LI C+GVP +SH++DP   V   +  V +     V ++VG+TTG+ FCG VG+++RREYA+VGD +N++ARL        +  EET K  + +IE+  +   + +KG+  P  V++P
Sbjct: 1328 EIQKIVYKYEGTVRQFMIDDKGCVLIACWGVPPYSHEDDPSRAVEAAMEIVVSLFKLTVISTVGVTTGKCFCGDVGSDERREYAVVGDMVNLSARLMSHSQGGVLCCEETSKNAK-NIEFVRLSDPIKVKGKAAPIPVFKP 1467          
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Match: A0A8J6C2E0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C2E0_DIALT)

HSP 1 Score: 113 bits (283), Expect = 1.890e-26
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 1
Query:    4 QLQMLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLSVRNG-GAPGVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDFIVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP 423
            Q+  +VSR++G + +  +DDKG +L V FG+P F H +DP  GVL  + +R+      +RA +GITTG VF G VGAE R EY   GD +N+AAR      ++ + DEETY     ++++D ++ + + KG++KP   YRP
Sbjct:  830 QIMTIVSRYEGTITRISIDDKGTVLKVTFGLPPFLHTDDPTRGVLCAMGIRDAMRILRLRACIGITTGLVFVGCVGAEHRCEYTEYGDKVNLAARYMSNAVNEVLTDEETYNKCAKTVDWDVLKPITV-KGKDKPIPAYRP 969          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7488.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q551V8_DICDI3.220e-3046.76Guanylyl cyclase n=2 Tax=Dictyostelium discoideum ... [more]
F0ZMV7_DICPU4.380e-3045.32Uncharacterized protein SgcA n=1 Tax=Dictyostelium... [more]
F4QCJ5_CAVFA2.050e-2942.96Guanylyl cyclase n=1 Tax=Cavenderia fasciculata (s... [more]
A0A8J4UZ03_9MYCE3.820e-2943.97Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
UPI000644D2341.130e-2741.55hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6B2KWP3_9EUKA7.300e-2742.76Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
UPI00168338469.850e-2739.29AAA family ATPase n=1 Tax=Microcoleus sp. FACHB-83... [more]
A0A6I5QXP5_9CYAN1.340e-2638.73AAA family ATPase n=1 Tax=Leptolyngbya sp. SIO1E4 ... [more]
D3BBR1_POLPP1.380e-2641.13Guanylyl cyclase n=1 Tax=Polysphondylium pallidum ... [more]
A0A8J6C2E0_DIALT1.890e-2641.13Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7488contigP-wetherbeei_contig7488:4..602 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog44689.DDB0191330
PFAMsGuanylate_cyc
Model size423
Max annot lvl554915|Amoebozoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.17e-31
EggNOG OGsCOG2114@1|root,2QPPT@2759|Eukaryota,3XESS@554915|Amoebozoa
DescriptionAdenylyl- / guanylyl cyclase, catalytic domain
Cds size411
COG categoryT
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186984.294265-UTR-P-wetherbeei_contig7488:3..151683186984.294265-UTR-P-wetherbeei_contig7488:3..15Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7488 4..15 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186984.3039644-CDS-P-wetherbeei_contig7488:15..2871683186984.3039644-CDS-P-wetherbeei_contig7488:15..287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7488 16..287 +
1683186984.3125465-CDS-P-wetherbeei_contig7488:463..6021683186984.3125465-CDS-P-wetherbeei_contig7488:463..602Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7488 464..602 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7488.1.1prot_P-wetherbeei_contig7488.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7488 16..602 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7488.1.1

>prot_P-wetherbeei_contig7488.1.1 ID=prot_P-wetherbeei_contig7488.1.1|Name=mRNA_P-wetherbeei_contig7488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
MLVSRHDGMVRQFVVDDKGCILIVCFGVPGFSHDNDPELGVLLGLSVRNG
GAPGVRASVGITTGRVFCGIVGAEKRREYAMVGDAINVAARLACLHADDF
IVDEETYKLTRLSIEYDGIRQVVMLKGQNKPALVYRP
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mRNA from alignment at P-wetherbeei_contig7488:4..602+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7488.1.1 ID=mRNA_P-wetherbeei_contig7488.1.1|Name=mRNA_P-wetherbeei_contig7488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=599bp|location=Sequence derived from alignment at P-wetherbeei_contig7488:4..602+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCAGCTGCAAATGCTCGTAAGCCGCCACGACGGTATGGTGCGGCAGTT TGTGGTCGATGATAAAGGCTGCATCCTCATCGTCTGCTTTGGCGTTCCAG GCTTCAGCCATGACAACGATCCCGAGCTCGGAGTGCTGCTCGGTCTCAGC GTCCGGAACGGCGGCGCTCCCGGCGTCCGCGCCAGCGTCGGCATCACCAC CGGGCGTGTCTTCTGCGGCATCGTCGGCGCCGAGAAACGGCGAGAGTACG CAATGGTCGGAGACGCGATAAATGTCGCCGCCCGGTGAGCGAACGCGGCA CAGTGACGTTCTTCGTTGCCGCGCATCGTCGTCTATCCATGGTGCAGAAG CTGTAATGGGGGCAGACGGAATGTCATTGTAATGCAAGCATGCTTACATT CAGACACCTCTATGCCTCCTATCTTTCTGCCTCTCCTTTCCGTGCTTCTA TTGACTACAGGCTAGCGTGTCTTCACGCCGATGACTTCATCGTGGACGAA GAAACGTATAAGCTGACTCGCCTCTCCATCGAGTACGACGGGATACGGCA GGTGGTGATGCTCAAGGGGCAGAACAAGCCGGCCCTGGTCTACCGGCCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7488:4..602+

>mRNA_P-wetherbeei_contig7488.1.1 ID=mRNA_P-wetherbeei_contig7488.1.1|Name=mRNA_P-wetherbeei_contig7488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig7488:4..602+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCGTAAGCCGCCACGACGGTATGGTGCGGCAGTTTGTGGTCGATGA
TAAAGGCTGCATCCTCATCGTCTGCTTTGGCGTTCCAGGCTTCAGCCATG
ACAACGATCCCGAGCTCGGAGTGCTGCTCGGTCTCAGCGTCCGGAACGGC
GGCGCTCCCGGCGTCCGCGCCAGCGTCGGCATCACCACCGGGCGTGTCTT
CTGCGGCATCGTCGGCGCCGAGAAACGGCGAGAGTACGCAATGGTCGGAG
ACGCGATAAATGTCGCCGCCCGGCTAGCGTGTCTTCACGCCGATGACTTC
ATCGTGGACGAAGAAACGTATAAGCTGACTCGCCTCTCCATCGAGTACGA
CGGGATACGGCAGGTGGTGATGCTCAAGGGGCAGAACAAGCCGGCCCTGG
TCTACCGGCCT
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