mRNA_P-wetherbeei_contig7476.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7476.2.1
Unique NamemRNA_P-wetherbeei_contig7476.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.040e-68
Identity = 124/252 (49.21%), Postives = 162/252 (64.29%), Query Frame = 1
Query:  145 MASLFFGYP-TAGSKGNATVLSWCKAANLLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTD------RVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGG-ITSAVQHRRKSAITAAVCCGSRPP---------MLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 849
            M+SLFF Y  + GS   AT L+WCK+  LLAVA +DG +  +  +G V  A +IVRE      +   +DW    +TLAVGWADGQ+S+W+        R  C C N +VHR  VT+L W+PAG  LVTGD  GTVC+WK D  GG +   VQ+R+K A+TAAV CGS            + PPFFF T+ G VC+ADD GHCT++QQL S VD+L+F+E A+RL+V+TR LLM QL++ +D  + Q MK KL
Sbjct:    1 MSSLFFDYKCSGGSTAAATALTWCKSEYLLAVAAEDGHIYFYQDEGVVAPAATIVRETH----VPTLMDWHKKGKTLAVGWADGQISLWSVQDQIQDSRTTCSCANGAVHRAPVTLLLWNPAGTCLVTGDAAGTVCVWKCDSHGGTVLPLVQYRKKGAVTAAVFCGSTSSSQXXXXXXXLSPPFFFATDTGTVCYADDLGHCTDIQQLGSCVDTLMFYEGAMRLIVVTRSLLMVQLQVADDAHVTQFMKVKL 248          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 6.490e-63
Identity = 126/255 (49.41%), Postives = 155/255 (60.78%), Query Frame = 1
Query:  145 MASLFFGYPTAGS----KGNATV-LSWCKAANLLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNT------DRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRK-SAITAAVCCGS--------RPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 849
            M SLFF YP  G     +G  T  L+WCK+ NLLA A D GRV+++  +G  V A SI R G +QR  A  +DW P  R LA+GW DGQVS WN       D   C C+N  VH+  +                +GG +C+WK D RG +  +VQ+RRK SAITAAV CGS             P FFF TE+G VC+ADD GHC+EVQQLTS VD L+F+E A RLVV+TR LLMTQL++ EDGR++Q MK KL
Sbjct:    1 MNSLFFDYPCKGDGRDERGAVTTDLAWCKSENLLACALDSGRVAVYQDEGAEVVAASIAR-GNRQR--ASVMDWSPRGRLLAIGWVDGQVSTWNVMEPLQEDTSICACSNQGVHKQPIXXXXXXXXXXXXXXXXKGGVICVWKADARGNMAPSVQYRRKNSAITAAVFCGSPSHSADALAQAFSPSFFFSTESGAVCYADDLGHCSEVQQLTSPVDRLMFYEAARRLVVITRSLLMTQLQVGEDGRVSQFMKVKL 252          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A8J5XQB9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQB9_DIALT)

HSP 1 Score: 137 bits (346), Expect = 7.510e-33
Identity = 79/223 (35.43%), Postives = 118/223 (52.91%), Query Frame = 1
Query:  229 LAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTDRVACVCTNSSVHRH---AVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAVCCGSRPPML-------------PPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 849
            LAVA + G V+    +GE +++ ++ +    +    V + W P+   LA+ WADG +S+WN +      TN     H   AVTV+QW P G+RL++GD GG V +WK+D  G +++   H+R   IT AV   SR                 PPF+F  + G +C ADD G+C +   L   + +++F+     LVVLTR L+M Q R    G++ Q MK KL
Sbjct:  665 LAVAREGGIVNFFQEEGESLESRTVSKYPPSE---VVTIAWCPNKPVLAIAWADGTLSIWN-ESTGTGVTNDDRDVHSGRAVTVVQWSPDGSRLMSGDSGGRVSVWKLDPTGRLSAVCTHQRSGTITHAVYKPSRAKSAASAIASGFAVAEQPPFYFANDGGAICIADDMGNCNDTVSLGMPLAAMLFYSAKEHLVVLTRALVMAQYRAEPGGKMTQVMKVKL 883          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S2G5B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5B5_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.570e-32
Identity = 71/166 (42.77%), Postives = 99/166 (59.64%), Query Frame = 1
Query:  349 WQPHTRTLAVGWADGQVSVW--NTDRVACVCTNSSVHRHA-VTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAVCCG-----SRPPML-----PPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRM 807
            WQ   + LA GW DG ++++  N  ++ CV +N   H  A ++ L W+P  +RLV+GD  G V +WK D RG ++   Q++  SA TA V        SR  +L     P FF+GTE G V FADD GH TEVQ L+S+VD + F+    RLV++TR LLM QL++
Sbjct:    7 WQAKNKILATGWEDGHIAIYSLNNQKLDCVYSNDKDHSGARLSFLMWNPMSSRLVSGDSAGVVRVWKSDSRGALSMYKQYKCNSATTAGVFSTAGHMQSRSDVLGHAFSPSFFYGTEDGKVYFADDLGHMTEVQALSSSVDCMKFYGDKSRLVIITRALLMVQLQV 172          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S0SRA0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRA0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 6.830e-23
Identity = 74/247 (29.96%), Postives = 112/247 (45.34%), Query Frame = 1
Query:  193 ATVLSWCKAANLLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALD-------WQPHTRTLAVGWADGQVSVWNTD---RVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAV------------------CCGSRPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 849
            A  LSW    ++ A+A+     SI   D E      +  EG Q     +A D       WQP+ + + +GWADG +S W  D   R     +NSS                                D RG ++   Q++RK AIT A+                     S+    P FFFGT+ G + +ADD GHC++VQQL S +D ++F E   RL+++TR LL++Q ++ EDG++++  + KL
Sbjct:   17 ANQLSWSNNDSIAAIAS----YSIDHNDKESYQVLFVNSEGIQITGPTIAHDQEATVFEWQPNGKIVVIGWADGMISSWLVDGKSRAVSTYSNSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVRGTLSPIRQYKRKGAITTAIFYVLPVKSDLLRKNENNSSSTSKNSYSPSFFFGTDQGVIVYADDLGHCSDVQQLPSIIDIMLFFEEKSRLIIITRSLLLSQYQVGEDGKVSRLSQVKL 259          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A6H5KMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH2_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.230e-22
Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 1
Query:  568 AVQHRRK-SAITAAVCCGS--------RPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQL 801
            +VQ+RRK SAITAAV CGS             P FFF TE+G VC+ADD GHC+EVQQLTS VD L+F+E A RLVV+TR LLMTQL
Sbjct:    4 SVQYRRKNSAITAAVFCGSPSHSADALAQAFSPSFFFSTESGAVCYADDLGHCSEVQQLTSPVDRLMFYEAARRLVVITRSLLMTQL 90          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S3KPB5_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KPB5_EUPCR)

HSP 1 Score: 97.8 bits (242), Expect = 2.240e-21
Identity = 54/167 (32.34%), Postives = 90/167 (53.89%), Query Frame = 1
Query:  367 TLAVGWADGQVSVWNTDRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAVCCG------SRPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 849
            +LA+GW DG V++WN D          +H+  +T + +   G R+VTGD+ GTV +W+     G+T   Q+ +  +IT    CG      S       FFFG + G VC ADD  +C EV ++  ++ S++F+E+   ++++T  LL+ Q R+  + ++    K KL
Sbjct:    4 SLAIGWQDGVVTLWNEDP-RLTREEKVLHKSEITNITFSQDGTRMVTGDKSGTVGVWRT--HRGLTPICQYSKSGSITNVAFCGLAYEEDSMEKWNSLFFFGGKKGSVCLADDLKNCHEVCKVGGSIKSMLFYEKENSVIIITSHLLLVQFRINLNEKLVPDRKVKL 167          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S0QPT2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPT2_9CRYP)

HSP 1 Score: 85.1 bits (209), Expect = 2.380e-15
Identity = 68/221 (30.77%), Postives = 99/221 (44.80%), Query Frame = 1
Query:  208 WCKAAN---LLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRT-LAVGWADGQVSVWNTDRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGG-ITSAVQHRRKSAITAAV-----CCGSRPPMLPPFFFGTEAGHV-CFADDAGHCTEVQQL------TSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDG 819
            WC       LL VA  DG ++    +GE +   S  R   Q   +A    W P     LA GW DG +++W+         NS   RH +TVL+W P G R+V+GDR GTV +WKV  +G  I      + K A+T  V        +     P F+F  E G + C  DD+  C E+ ++       S    L +      LV +   ++MT+L+  +D 
Sbjct:   29 WCPKEEDKPLLVVACSDGALTKFHDEGEKIGVES--RRPSQPTCIA----WGPAPSFFLAAGWHDGVITLWDEKNTLPREDNSVHERHPITVLKWSPKGDRMVSGDRNGTVGVWKVVDKGRLICQCTIQKGKVAVTHVVFRSNDSRAATADQAPSFYFSGEDGIIYCGTDDSSRCREIFKMDGMDGSASGTAVLQYLAENDELVGINDHVIMTRLKGPDDS 243          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A8B7NSE6_HYAAZ (intraflagellar transport protein 140 homolog n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NSE6_HYAAZ)

HSP 1 Score: 79.0 bits (193), Expect = 1.060e-13
Identity = 46/142 (32.39%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  196 TVLSWCKAANLLAVAT----DDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTDRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAV 609
            T ++W   A+ LAVA+      G V++++ +G++     I      Q     +L W P  R LAVGW  G++ +WN D    +    S+HR A+T+L++  AG+RLVT D+ G+V  W+    G + +A  H  K +++  V
Sbjct:   19 THMAWHSEASCLAVASYSEEKGGTVNVYTGEGKLCSEVDIPPHPTAQ---VTSLAWHPIQRLLAVGWETGELYLWN-DHEEELHQIQSLHRAAITILEFSHAGSRLVTADQSGSVVGWRSSSSGNLQTAFTHELKDSLSQVV 156          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A482RUU9_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUU9_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 4.210e-13
Identity = 43/143 (30.07%), Postives = 69/143 (48.25%), Query Frame = 1
Query:  520 GTVCMWKVDGRGGITSAVQHRRKSAITAAVCC--------GSRPP-------------------------MLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 849
            G VC+W  D RG +    Q++RK  IT  V C        G++                             P FFF T+ G +C+ADD GHCT++  L+S++D L+F+  +  L+++TR LL+    +  +G+I++    KL
Sbjct:    4 GVVCVWSADNRGMLAPMRQYKRKGEITQLVFCVLSSKLDLGNKAAASISXXXXXXXXXXXXXEGGVKISQFTPSFFFSTDRGTLCYADDMGHCTDIHSLSSSIDILLFYPASSYLLLITRSLLLITYHISGEGKISKVHSVKL 146          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835YKN9_9STRA2.040e-6849.21Putative intraflagellar transport protein 140 n=1 ... [more]
D8LH96_ECTSI6.490e-6349.41Intraflagellar transport protein 140 puative n=1 T... [more]
A0A8J5XQB9_DIALT7.510e-3335.43Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2G5B5_9STRA8.570e-3242.77Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S0SRA0_9STRA6.830e-2329.96Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5KMH2_9PHAE1.230e-2263.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3KPB5_EUPCR2.240e-2132.34Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
A0A7S0QPT2_9CRYP2.380e-1530.77Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A8B7NSE6_HYAAZ1.060e-1332.39intraflagellar transport protein 140 homolog n=1 T... [more]
A0A482RUU9_9ARCH4.210e-1330.07Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7476contigP-wetherbeei_contig7476:1214..2639 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LH96
Preferred nameIFT140
PFAMsANAPC4_WD40,TPR_7
Model size850
Max annot lvl2759|Eukaryota
KEGG koko:K19672
Hectar predicted targeting categorymitochondrion
GOsGO:0001501,GO:0001654,GO:0001655,GO:0001750,GO:0002119,GO:0002164,GO:0003002,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0005930,GO:0006810,GO:0006928,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0006996,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007568,GO:0007600,GO:0007605,GO:0008104,GO:0008150,GO:0008340,GO:0008589,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009966,GO:0009987,GO:0010259,GO:0010638,GO:0010646,GO:0010970,GO:0015630,GO:0016043,GO:0021532,GO:0021915,GO:0022008,GO:0022607,GO:0022611,GO:0023051,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030326,GO:0030705,GO:0030990,GO:0030991,GO:0031076,GO:0031344,GO:0031346,GO:0031503,GO:0032386,GO:0032388,GO:0032391,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0035107,GO:0035108,GO:0035113,GO:0035295,GO:0035721,GO:0035735,GO:0035845,GO:0035869,GO:0036064,GO:0040024,GO:0042073,GO:0042461,GO:0042733,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043053,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0046530,GO:0046907,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048583,GO:0048598,GO:0048666,GO:0048699,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051270,GO:0051272,GO:0051641,GO:0051649,GO:0055115,GO:0060041,GO:0060173,GO:0060271,GO:0060341,GO:0060429,GO:0060491,GO:0060632,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0072001,GO:0072359,GO:0097014,GO:0097458,GO:0097542,GO:0097730,GO:0097731,GO:0097733,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1902017,GO:1902115,GO:1904888,GO:1905515,GO:1905796,GO:1905798,GO:1905799,GO:1905801,GO:1990403
Exons3
Evalue1.06e-63
EggNOG OGsKOG3617@1|root,KOG3617@2759|Eukaryota
Ec32 ortholog descriptionIntraflagellar transport protein 140 putative
Ec32 orthologEc-24_001080.1
Descriptionintraciliary retrograde transport
Cds size849
COG categoryT
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186983.5892763-CDS-P-wetherbeei_contig7476:1213..16241683186983.5892763-CDS-P-wetherbeei_contig7476:1213..1624Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7476 1214..1624 +
1683186983.605251-CDS-P-wetherbeei_contig7476:1795..20111683186983.605251-CDS-P-wetherbeei_contig7476:1795..2011Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7476 1796..2011 +
1683186983.614971-CDS-P-wetherbeei_contig7476:2417..26391683186983.614971-CDS-P-wetherbeei_contig7476:2417..2639Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7476 2418..2639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7476.2.1prot_P-wetherbeei_contig7476.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7476 1214..2639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7476.2.1

>prot_P-wetherbeei_contig7476.2.1 ID=prot_P-wetherbeei_contig7476.2.1|Name=mRNA_P-wetherbeei_contig7476.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
IRLLKHIGAHSPLAGFKPSRRVPGRATSHRSAGITASRKVERKRVKQSMA
SLFFGYPTAGSKGNATVLSWCKAANLLAVATDDGRVSIHSRDGEVVDATS
IVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTDRVACVCTNSSV
HRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAIT
AAVCCGSRPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHE
RAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL
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mRNA from alignment at P-wetherbeei_contig7476:1214..2639+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7476.2.1 ID=mRNA_P-wetherbeei_contig7476.2.1|Name=mRNA_P-wetherbeei_contig7476.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1426bp|location=Sequence derived from alignment at P-wetherbeei_contig7476:1214..2639+ (Phaeothamnion wetherbeei SAG_119_79)
ATACGATTGCTGAAGCATATAGGAGCACATTCACCTCTGGCAGGCTTCAA GCCCTCGAGGCGGGTCCCAGGTCGAGCAACTTCGCATCGAAGCGCCGGCA TAACAGCTTCGAGGAAAGTAGAGCGAAAGAGGGTGAAACAAAGCATGGCG TCGCTGTTCTTCGGGTACCCGACGGCGGGATCCAAGGGTAATGCAACCGT ACTCAGCTGGTGCAAGGCCGCCAACCTGCTTGCGGTTGCCACTGATGACG GGCGCGTCTCAATCCACTCGAGGGACGGCGAAGTGGTCGACGCGACGTCC ATCGTCCGCGAGGGCAAGCAGCAAAGAGTCCTCGCGGTAGCCCTCGACTG GCAGCCGCACACGCGCACCCTCGCCGTCGGCTGGGCGGACGGTCAGGTGT CCGTGTGGAACGTCTTCGACTCGGCGCCGGCGGCGCCGCCCAAGGCTGCC ACACCCTCGTCCAAACGGCAGCAGGGTGGCAGCGGCGGCGGCGACCAGAA GCAGCATGAGCCCGAAGACCCTCCCGAGGGCCAGCGCCAGAATTCCGGCG GAGGGGAACAATTGCAGCAGCCACCGCAGCAGACGGATCGGGTGGCATGC GTCTGCACCAACTCCAGCGTCCATCGCCACGCCGTCACCGTCCTGCAGTG GGACCCCGCCGGCGCACGGCTCGTGACGGGCGACCGCGGCGGCACGGTGT GCATGTGGAAGGTCGACGGCCGCGGTGGCATCACGTCGGCCGTACAGCAC CGCCGCAAGAGCGCCATCACCGCCGCCGTCTGCTGCGGCTCGCGGCCCGT CGGAGACGGTGGCGGCAGCGGCGGGACTGGAAATGGAACCGCGGAGCAGG TGCGTCGCATTGTCATTGGATACATTGCGGCTCTGCTTCGGGGGAACGAC CCGAACTGATTTTCTCTCTGTATGGATCTTTTCCTCTCTAAGAGAGGCAA TTCTCTGGGGGTAAAGGCTGGAGCGTCAACCTTGCAAGCCTTCGGGTGTA TCTCTTGCACTTTCTTCTTCCTGACTGTTGGTTGCCGAACATTGGAAAGT AGTGGAACGTTCTCTTCCGAAGTTTCCCTTCTCGCTTCTAGCGTTCCACT ATTACTGATTCTCACCCAGCTCAACCTAGCGTCCCATCTCTTTCGCCCTC TCTCTCACTAACCACGCTCCCAACACCTCCTTTCCCCTTCCTGCCGTTCA GCAGCCGATGCTGCCGCCGTTCTTCTTCGGCACGGAGGCCGGCCACGTCT GCTTCGCCGACGACGCCGGCCACTGCACCGAGGTCCAGCAGCTTACCAGC GCCGTCGACTCTTTGGTGTTCCATGAGCGGGCCGTGCGTCTCGTCGTTCT GACGCGGGGATTGCTTATGACGCAGCTGCGCATGTGTGAGGACGGCCGCA TCGCGCAGCACATGAAGGCGAAGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7476:1214..2639+

>mRNA_P-wetherbeei_contig7476.2.1 ID=mRNA_P-wetherbeei_contig7476.2.1|Name=mRNA_P-wetherbeei_contig7476.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig7476:1214..2639+ (Phaeothamnion wetherbeei SAG_119_79)
ATACGATTGCTGAAGCATATAGGAGCACATTCACCTCTGGCAGGCTTCAA
GCCCTCGAGGCGGGTCCCAGGTCGAGCAACTTCGCATCGAAGCGCCGGCA
TAACAGCTTCGAGGAAAGTAGAGCGAAAGAGGGTGAAACAAAGCATGGCG
TCGCTGTTCTTCGGGTACCCGACGGCGGGATCCAAGGGTAATGCAACCGT
ACTCAGCTGGTGCAAGGCCGCCAACCTGCTTGCGGTTGCCACTGATGACG
GGCGCGTCTCAATCCACTCGAGGGACGGCGAAGTGGTCGACGCGACGTCC
ATCGTCCGCGAGGGCAAGCAGCAAAGAGTCCTCGCGGTAGCCCTCGACTG
GCAGCCGCACACGCGCACCCTCGCCGTCGGCTGGGCGGACGGTCAGGTGT
CCGTGTGGAACACGGATCGGGTGGCATGCGTCTGCACCAACTCCAGCGTC
CATCGCCACGCCGTCACCGTCCTGCAGTGGGACCCCGCCGGCGCACGGCT
CGTGACGGGCGACCGCGGCGGCACGGTGTGCATGTGGAAGGTCGACGGCC
GCGGTGGCATCACGTCGGCCGTACAGCACCGCCGCAAGAGCGCCATCACC
GCCGCCGTCTGCTGCGGCTCGCGGCCCCCGATGCTGCCGCCGTTCTTCTT
CGGCACGGAGGCCGGCCACGTCTGCTTCGCCGACGACGCCGGCCACTGCA
CCGAGGTCCAGCAGCTTACCAGCGCCGTCGACTCTTTGGTGTTCCATGAG
CGGGCCGTGCGTCTCGTCGTTCTGACGCGGGGATTGCTTATGACGCAGCT
GCGCATGTGTGAGGACGGCCGCATCGCGCAGCACATGAAGGCGAAGCTG
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