mRNA_P-wetherbeei_contig7467.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7467.2.1
Unique NamemRNA_P-wetherbeei_contig7467.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A835Z938_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z938_9STRA)

HSP 1 Score: 220 bits (560), Expect = 3.760e-57
Identity = 161/454 (35.46%), Postives = 211/454 (46.48%), Query Frame = 1
Query:  682 QGWRQPAPRRVASTLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNL------GKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQ-SGGGVGIGDGPGGRRLLRVALDP------------------HGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHPTRDVVVSCGSDGLFRLWELVPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLVPP------AAGKITSLAFLQGTPHLAAASRQAVVVWDILS 1950
            +G R  A  R  ST LHWH+HAV+CLA+   G    YLYSGGEE VLVQWNL      G  +Q FLPRL APLT IA SPDG     T  +N  A+V +  W V WQ        +  GV +        L  +AL P                   G + +NG PG LQ+YDP  DLLS  LEVV +NRVSR D   +  P+V H  FS  G  + T+D+R+        +G G+  G                    LKFW  +   R  RF L++  DQPH G+ V  L YHP  D  V+   D  F++W +   +    T +                               +      W C   + YK GL+A A AFS DG+++AVAFG + TLW  A A+LL  L+PP      AA ++ +LAF+  T  L A    A  + D+++
Sbjct:  479 EGGRGRAGGRPKSTTLHWHAHAVSCLAFSPDG---GYLYSGGEEGVLVQWNLRRGGGGGAANQNFLPRLGAPLTRIAMSPDGLFCALTLEDNCVALVRISTWAVEWQXXXXXXXXTSAGVALVLISTSAALRGLALAPTRELVDYSAKIKLGIDASSGAVVINGQPGHLQYYDPHQDLLSGVLEVVPFNRVSRVDKLRMAPPLVEHFAFSSSGERVATLDTREV-------QGEGLRQG----------------DVRCLKFWALD--RRSGRFLLESSVDQPHQGA-VTSLCYHPLVDRAVTTSLDETFKVWTMQRRDPSLTTPSTT-------------------------VQQQQQGPQYMWTCTRTVAYKRGLSAEAAAFSSDGSLLAVAFGGLVTLWGGAGASLLAVLLPPLSAVGSAAARVHALAFVPRTALLFAQRAGAATLTDVVA 878          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A6H5KD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD90_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 9.050e-47
Identity = 165/479 (34.45%), Postives = 213/479 (44.47%), Query Frame = 1
Query:  718 STLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGD----GPGGRRLLRVALDP-HGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVS----------------RSDAEPVPV----PVVRHCCFSRDGAWLVTVDSRQDSLAR-----RPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHG-GSGVAGLAYHPTRDVVVSCGS-DGLFRLWELVPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGK--------------------------VATLWDSARAALLWTLVPPAA----------GKITSLAFLQGTPHLAAASRQAVVVWDILS 1950
            ST +HWH+H V C+A    G+    L+SGGEEAVLVQWNL K ++AFLPRL APL  +A SP      AT  +N+  +V L  W+V WQ+RGL L     + +          R+ L++ + P  G +  NG  G +QFY+   + L  + EVV  NR +                +SD  P       PVV H  FS DG  +V V SR  + +      +  RG         G  XXXXXXXXXXX           G     +  DT  + PHG G+ VA L YHP  DVVV+ G  DG F LW L     D A E++     GGS                     D   AV  W C L + YK GLAAT  +F  DG+V+AVA+                            V TLW    A LL TL+PP            G +  L F+  +  + AA      VWD++S
Sbjct:  430 STDMHWHAHPVRCMAVAPDGV---QLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQGLAVSPGQEYAAATTMDNAVTLVGLAGWDVLWQMRGLALSRPPAIRLSSPAERAERDRQALKLTMGPKRGIVVCNGRAGHVQFYNVGTNCLEASAEVVRVNRDTSAKSWQSDHLSKMQRGKSDGGPGGAGSVGPVVEHVAFSSDGKRMVAVASRAPASSPSLSFWKHARGSDPFGSNNGGYTXXXXXXXXXXXXXXXXXXXXXXG----HWAADTSVENPHGPGNAVAALEYHPREDVVVTAGKQDGGFNLWGL--RRTDNALESLAAAAKGGSGGVRTEG--------------DGEQAV-HWACSLSVRYKEGLAATGASFCSDGSVLAVAYSPNEEVNWDGSNGIRKGQRRGQHSTGQGVITLWSLETATLLSTLLPPRTRHVRFASPKTGPLKCLGFIAASGRIMAAGSGYAAVWDMVS 884          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A1Y1YRQ1_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YRQ1_9FUNG)

HSP 1 Score: 160 bits (406), Expect = 1.310e-37
Identity = 120/418 (28.71%), Postives = 185/418 (44.26%), Query Frame = 1
Query:  709 RVASTLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLRVALDPHGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHPT--RDVVVSCGSDGLFRLWEL-VPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLV-PPAAGKITSLAFLQGTPHLAAASRQAVVVWDILS 1950
            R  ++++HWH+H V  +A+   G+   Y+ SGGEEAVLV W L    + FLPRL + + +I  SPD +       +NS  +VS  +  +   ++GL         +       R   +    +  + +NG+PG +QFY+P  D     LEV   NRVSR+D + +  P V H  FS++G W+ TVDSR D                                   LKFW  +  +  Q +T++T  D PH G  +  L +HP+    +VV+ GSD  F++WEL  P++  A                                        +SW+CR  +G+          FS DG+++AV++G + TLWD     +   L   P    I  L F   +P L A ++  + VW++LS
Sbjct:  284 RPVTSVMHWHAHKVNHIAFTDDGV---YMVSGGEEAVLVVWQLQTGHRQFLPRLGSEIKSIVISPDQSLYAVGHLDNSVRIVSAVDLSIKQAIQGLKYAQ-----MNHTSNPLRTGLIVEPKNNHIVLNGVPGTIQFYNPYTDRHVMELEVSPRNRVSRTDEKEIIEPQVEHVAFSKNGDWMATVDSRDDG---------------------------ENTPELYLKFWKFDPNT--QSYTMNTRVDFPHQGR-ITSLQFHPSIRSPMVVTAGSDKKFKVWELQTPVDRRAD---------------------------------------VSWVCR-SVGFYRDSTPYNATFSEDGSILAVSYGHIITLWDPYTNTIQGLLSHSPHTRPIKKLVFTSNSPFLIAITKDHLYVWNLLS 623          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A7S1CJE4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJE4_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.740e-35
Identity = 131/420 (31.19%), Postives = 177/420 (42.14%), Query Frame = 1
Query:  712 VASTLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLR--VALDPH-GRLAVNGLP--GRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHC-CFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHPTRDVVVSCGSDGLFRLWELVPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLVPPAAGK-ITSLAFLQGTPHLAAASRQAVVVWDILS 1950
            V +T  HWH+HAVTC A+   G    YL SGG+E VLV W L   ++ FLPRL APL +I  +          ++N+ + V+  +  VA+  RGL L +         P   R+L   +  DP  G +AVNG P  G LQ YD   D    AL+V   N VS  D  P P PV  +C  FS DG  + TVD   D +                                SLK W  +      R+ L+T  D PH  + V+ L YHPT  V+VS   D  F++WE    +               S                            +W CR  +G+         AFS DG+++AVA   + TLW      LL TL  P   + +   AF   + +L AA+   + VWD+LS
Sbjct:   77 VTTTTQHWHAHAVTCAAFTPDG---AYLLSGGQEGVLVVWQLATGTKTFLPRLGAPLRSIGCAGSQAWYAVGLSSNAVSFVNALSSRVAFVYRGLELAAH--------PASERVLAGGIVADPRTGAVAVNGAPSGGALQLYDAIRDRHVVALQVAPRNFVSGPDVTPPP-PVRVYCVAFSADGTSVATVDRCDDEMLDTL----------------------------SLKMW--DWVPEAGRYVLNTRVDSPHKTT-VSALRYHPTLPVIVSASHDRTFKVWERQQRDKGPTMAE--------SQQPRSRAAKRKARANAAAAAMSAAVKDTAWGCR-SVGFYRDFPLHDAAFSADGSLLAVACAHILTLWAPMTTTLLRTLAHPGPTEPVRHCAFAGASEYLVAATDTQLYVWDMLS 444          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A7D9HS55_PARCT (WD repeat-containing 75 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HS55_PARCT)

HSP 1 Score: 152 bits (385), Expect = 4.830e-35
Identity = 126/415 (30.36%), Postives = 173/415 (41.69%), Query Frame = 1
Query:  721 TLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLRVALDPHGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHP-TRDV--VVSCGSDGLFRLWELVPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLVPPAAGKITSLAF-LQGTPHLAAASR-QAVVVWDILS 1950
            T LHWH+H+V  L +   G    YLYSGGEE+VLV W +  N + F PRL AP+  I  S D T +    T+N   +VS  +  V   ++GL   +    G+   P  + L+           +N   G LQFY P  D L+  L++V  N +S+   EP+ + VV    FS DG WL TV+ R D       R                           LKFW  N     QR  L+T  D PH G  VA + + P + D+   +S   DG F++W L P                                       D      +WLC+  +GY          FS DG+++AV +G+V TLWD        TL  P A  I  + F  Q   H+  AS    ++ WD+LS
Sbjct:  245 TKLHWHAHSVASLKFSNDG---AYLYSGGEESVLVFWQIDSNHKQFKPRLGAPIAHICNSQDDTVIAVCHTDNVINLVSAVDLSVVNVVQGLARANQVYTGLVSDPLSKSLV-----------LNSQDGNLQFYKPDTDSLAFTLDIVRQNYISKPKNEPLQMTVVEQISFSNDGTWLATVERRDDGKMTPENR---------------------------LKFWKFN--KEMQRHVLNTCIDPPHEGKVVA-VEFQPGSFDIRRAMSAALDGKFKIWILKPQP-------------------------------------DIKEHREAWLCQ-SVGYLRDEPVDDATFSSDGSLLAVVYGQVITLWDPCINEQKTTLYSPYAQNIRRVTFGRQSCSHIILASTTHHLMAWDLLS 577          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A8H7UCM8_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UCM8_9FUNG)

HSP 1 Score: 150 bits (380), Expect = 2.520e-34
Identity = 113/416 (27.16%), Postives = 181/416 (43.51%), Query Frame = 1
Query:  718 STLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLRVALDPHGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHPTRD----VVVSCGSDGLFRLWELVPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTL-VPPAAGKITSLAFLQGTPHLAAASRQAVVVWDILS 1950
            + L+HWH   +  L++   G+   YL SGGEE VLV W L    + FLPR+   + +I  SP+ +    +  +NS  +++  + ++   ++GL       V     P    L+    + H  + +NG+PG +QFY+P  D     LEV    R+SR D   +   +VRH  F  DG+W+ T+DSR D++                                 LKFW  +  +  Q + L T  D PH    +  L++    D    + ++  +D  F++W L                                           P++  SW CR  +G+      T  +FS DG+++AVAFG+V T+WD     +  TL +PP    I  LAFL  TP +AA ++  + VW++L+
Sbjct:  317 TALMHWHHRPLNTLSFTADGV---YLLSGGEEPVLVMWQLETGHKQFLPRVGGEIKSITISPNQSLYALSEADNSIRIINAVSQQIVRIIQGLQYAQ---VASNTYPLYTGLVIEPRNHH--VVMNGVPGNIQFYNPYLDSHVLDLEVAPITRISRPDENELIFSLVRHVAFMDDGSWMATIDSRDDNVTT---------------------------PELYLKFWSWDPDA--QSYILKTRVDYPHSAE-ITSLSFRHGSDSDVLMAITASADKTFKIWHLT-----------------------------------NDLGRHHPSSEASWACR-SVGFYRDNTPTVTSFSQDGSMLAVAFGQVLTIWDPIANNIQGTLALPPQQCHIQRLAFLGSTPFIAAVTKSHLYVWNLLT 658          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A1Y2GCT4_9FUNG (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GCT4_9FUNG)

HSP 1 Score: 150 bits (378), Expect = 3.750e-34
Identity = 122/423 (28.84%), Postives = 183/423 (43.26%), Query Frame = 1
Query:  709 RVASTLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLRVALDP-HGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRDGA--WLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHPTRD----VVVSCGSDGLFRLWELVPM-EADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLV-PPAAGKITSLAFLQGTPHLAAASRQAVVVWDILS 1950
            R  +T +HWH+H V  LA+   G    YL SGGEE+VLV W L    + FLPRL + +  I  SPD +       +NS  V+   + ++   ++GL       V     P    L+   ++P +G + +NGLPG LQFYDP  +     LEV   N+VSR+D + +  P V HC FS D +  W+ TVD R D                                   LKFW  +  +R   + L+T  D PH    +    ++P       +VV+   DG F++WEL    E+    EA                                     +W CR   G+   +      FS DG+++A+A+G++ TLW+     L   L  PP    I  L F++ +P L AA++  +  W++L+
Sbjct:  244 RPVTTTMHWHAHQVAALAFTSDG---NYLLSGGEESVLVIWQLQTGFKQFLPRLGSEIKHITVSPDQSLYAIGQQDNSVNVIRSIDLKIKIAIQGLKYSH---VNHLHNPLSTGLV---IEPRNGHVVLNGLPGTLQFYDPIKEQHIMELEVTPRNKVSRTDEKEIIPPRVMHCAFSNDKSARWMATVDGRDDQETT---------------------------PELYLKFWEYDSDART--YILNTRVDTPHSKE-ITSCVFNPREGDHAPMVVTTSLDGTFKVWELTHQGESRRGIEA-----------------------------------ERAWSCR-STGFYRDMVPYCSGFSSDGSLLAIAYGQIITLWNPYLNTLQGVLTQPPETRPIKHLVFIKNSPFLIAATKDHLYSWNLLT 591          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A197JLM2_9FUNG (WD40 repeat-like protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JLM2_9FUNG)

HSP 1 Score: 150 bits (378), Expect = 3.840e-34
Identity = 124/423 (29.31%), Postives = 180/423 (42.55%), Query Frame = 1
Query:  709 RVASTLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLRVALDP-HGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRD--GAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHPTRD----VVVSCGSDGLFRLWELVPM-EADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLV-PPAAGKITSLAFLQGTPHLAAASRQAVVVWDILS 1950
            R  +T +HWH+H V  LA+   G    YL SGGEE+VLV W +    + FLPRL + +  I  SPD         +NS  V+   + ++   ++GL L         D      L  + ++P +G + +NGLPG LQFYDP  D     LEV   N+VSR+  + +  P V H  FS D  G W+VTVD R D                                   +KFW  +  S    + L+T  D PH    V    ++P +     +VV+   DG F++WEL    EA    EA                                     +W CR   G+   +   A  F+ DG+++AVA+ ++ TLW+     L   L  PP    I  L FL+ +P L AA+   +  W++L+
Sbjct:  245 RPVTTSMHWHAHKVASLAFTSDG---NYLLSGGEESVLVIWQVSTGHKQFLPRLGSEIKHITISPDDALYAMGHQDNSVNVIRAVDLKIKNSIQGLKLSHT------DPINNPLLTGLVVEPRNGHVVLNGLPGTLQFYDPIKDQHIMELEVFPRNKVSRTYEKEIVAPRVMHVAFSNDKSGRWMVTVDGRDDKTTT---------------------------PELYIKFWEYDDDSHT--YVLNTRVDSPHKKE-VTSCIFNPRQGNQSPMVVTTSLDGTFKVWELTHQGEARRGVEA-----------------------------------ERAWSCR-STGFYRDMVPRAAGFASDGSLLAVAYDQIITLWNPYLNTLQGVLTQPPENRPIRHLTFLKNSPFLIAATSDHLYSWNLLT 592          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: A0A433PFQ6_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PFQ6_9FUNG)

HSP 1 Score: 148 bits (374), Expect = 4.850e-34
Identity = 121/422 (28.67%), Postives = 183/422 (43.36%), Query Frame = 1
Query:  709 RVASTLLHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLRVALDPHGR-LAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHP-----TRDVVVSCGSDGLFRLWELVPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLV-PPAAGKITSLAFL-QGTPHLAAASRQAVVVWDILS 1950
            R  ++ LHWH+H V  LA+   G+   YL SGGEEAVLV W L    + FLPRL + + +I  SPD         +NS  +VS  N E+   ++GL           D         + ++P    + +NG+PG LQFY+   D  +  LEV + N +SR+D + +  P V    F   G W+ TVDSR D L                                 LKFW  +  +  Q +TL+T  D PH    +  LA+HP      + + ++   D  F++W+LV M+       +                              EP    +W CR  +G          AFS DG+++AVA+G++ TLWD         LV PP    +  + FL + +P L + ++  + VW++L+
Sbjct:  288 RPVTSKLHWHAHKVNHLAFTADGV---YLLSGGEEAVLVLWQLETGHKQFLPRLGSEIRSITVSPDQNLYALGHLDNSIRIVSALNLELRQSVQGLKYAQT------DHNANPLSTGLVIEPRNHHVVLNGVPGTLQFYNAYTDRHALELEVASRNMISRTDDKEIVQPHVDFVAFWDHGEWMATVDSRDDGLTT---------------------------PELYLKFWWWDPDA--QSYTLNTRVDAPHT-EPITSLAFHPGSARGAQPMAITTSCDKNFKIWQLV-MQPGVGKNNV---------------------------EVSEP----AWACR-SVGVYRDYVPHHAAFSEDGSILAVAYGQIVTLWDPYTNTFQGVLVHPPENRAVKRVEFLGRNSPFLVSVTQDHLYVWNLLT 637          
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Match: UPI001F04E355 (WD repeat-containing protein 75-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04E355)

HSP 1 Score: 145 bits (367), Expect = 8.600e-33
Identity = 123/414 (29.71%), Postives = 175/414 (42.27%), Query Frame = 1
Query:  727 LHWHSHAVTCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAASPDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRRLLRVALDPHGR-LAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEPVPVPVVRHCCFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGXXXXXXXXXXXXXRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHP---TRDVVVSCGSDGLFRLWELVPMEADAATEAICGGGSGGSXXXXXXXXXXXXXXXXXXXXXDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKVATLWDSARAALLWTLVPPAAGKITSLAFLQGT-PH-LAAASRQAVVVWDILS 1950
            LHWH+H+V  L +   G    YLYSGGEE+VLV W +  N + F PRL AP+  I  S D   +  +  +N   +VS  +  V   ++GL   +    G+              DP  + L +N   G LQFY P  D LS  L++V  N +SR    P+ + VV H  FS DG+WL T++ R D       R                           LKFW  N   + QR  L+T  D PH G  V  + + P      + +S   DG F++W +V  + D                                        + SW C+  +GY      +  AFS DG+++AV +GKV TLWD        TL  P A  I ++AF +    H L A ++   + W++LS
Sbjct:  237 LHWHAHSVASLKFSHDG---AYLYSGGEESVLVFWQVDSNHKQFKPRLGAPIAHICNSDDDALIAVSHVDNVINLVSAVDLSVVNVVQGLTRANKVYSGL------------VADPCSKSLVLNNKDGSLQFYRPETDCLSFTLDIVQQNYISRLKNTPLQLIVVEHVKFSDDGSWLATIERRDDGKMTPENR---------------------------LKFWKYN--KKSQRHVLNTCIDPPHEGK-VISMEFQPGTSKTQLAMSASIDGKFKIW-IVKQQHDINEY------------------------------------LESWHCQ-SVGYFRDEPVSDAAFSSDGSLLAVVYGKVITLWDPYINEQKKTLCSPFAENIRNIAFGRKVCSHILLATTKHYFMAWNLLS 567          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7467.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z938_9STRA3.760e-5735.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KD90_9PHAE9.050e-4734.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1YRQ1_9FUNG1.310e-3728.71WD40 repeat-like protein n=1 Tax=Basidiobolus meri... [more]
A0A7S1CJE4_9STRA2.740e-3531.19Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7D9HS55_PARCT4.830e-3530.36WD repeat-containing 75 n=1 Tax=Paramuricea clavat... [more]
A0A8H7UCM8_9FUNG2.520e-3427.16Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A1Y2GCT4_9FUNG3.750e-3428.84Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A197JLM2_9FUNG3.840e-3429.31WD40 repeat-like protein n=1 Tax=Linnemannia elong... [more]
A0A433PFQ6_9FUNG4.850e-3428.67WD40-repeat-containing domain protein n=1 Tax=Endo... [more]
UPI001F04E3558.600e-3329.71WD repeat-containing protein 75-like n=1 Tax=Xenia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7467contigP-wetherbeei_contig7467:440..2389 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog192875.XP_004342692.1
Preferred nameWDR75
PFAMsWD40
Model size1951
Max annot lvl33154|Opisthokonta
KEGG koko:K14552
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000462,GO:0000775,GO:0000776,GO:0000785,GO:0000792,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005874,GO:0005875,GO:0005938,GO:0006139,GO:0006355,GO:0006356,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015630,GO:0015631,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0033553,GO:0034455,GO:0034470,GO:0034511,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045943,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0070840,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090069,GO:0090070,GO:0090304,GO:0097159,GO:0098687,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2000232,GO:2000234,GO:2001141
Exons1
Evalue3.64e-39
EggNOG OGsKOG1963@1|root,KOG1963@2759|Eukaryota,38HQ2@33154|Opisthokonta
Descriptionpositive regulation of transcription by RNA polymerase I
Cds size1950
COG categoryS
BRITEko00000,ko00001,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186983.149707-CDS-P-wetherbeei_contig7467:439..23891683186983.149707-CDS-P-wetherbeei_contig7467:439..2389Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7467 440..2389 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7467.2.1prot_P-wetherbeei_contig7467.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7467 440..2389 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7467.2.1

>prot_P-wetherbeei_contig7467.2.1 ID=prot_P-wetherbeei_contig7467.2.1|Name=mRNA_P-wetherbeei_contig7467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=650bp
DAGSPAKRLKKAGPPNKRKLATNAAAAAAAAAAARLRQQRLGRGPKMYRL
LRLELNNRQSAPPPRDLWRSEPKTGPFRVAFLPSSGPNRRDFLVVGYGAE
LVAVDAATGKSTLVATNFPAITALAADAETGQVASGHRSGGITLWHNVGD
VPAVLELEAAAAAAATETATAAAAAAASAAGAAATAAKKGKKTAPGASNA
AAASTAAAATAAEATVAASAAETYSGRQGWRQPAPRRVASTLLHWHSHAV
TCLAYGGGGMGSTYLYSGGEEAVLVQWNLGKNSQAFLPRLEAPLTAIAAS
PDGTRVVATATNNSAAVVSLFNWEVAWQLRGLCLQSGGGVGIGDGPGGRR
LLRVALDPHGRLAVNGLPGRLQFYDPAADLLSDALEVVAYNRVSRSDAEP
VPVPVVRHCCFSRDGAWLVTVDSRQDSLARRPGRGGGVSVGGRAGAAAAA
AAGREPPPRESLKFWCRNGGSRRQRFTLDTVADQPHGGSGVAGLAYHPTR
DVVVSCGSDGLFRLWELVPMEADAATEAICGGGSGGSDGRGSGGGGGGEG
GGGGEGGGDEPTAVLSWLCRLQIGYKSGLAATACAFSPDGTVVAVAFGKV
ATLWDSARAALLWTLVPPAAGKITSLAFLQGTPHLAAASRQAVVVWDILS
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mRNA from alignment at P-wetherbeei_contig7467:440..2389-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7467.2.1 ID=mRNA_P-wetherbeei_contig7467.2.1|Name=mRNA_P-wetherbeei_contig7467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1950bp|location=Sequence derived from alignment at P-wetherbeei_contig7467:440..2389- (Phaeothamnion wetherbeei SAG_119_79)
GACGCTGGGTCGCCAGCAAAGCGGCTGAAAAAGGCAGGACCGCCAAACAA GAGAAAACTCGCCACCAACGCTGCTGCTGCCGCTGCCGCCGCCGCTGCGG CCCGACTTAGGCAGCAGCGCCTCGGGCGCGGCCCAAAAATGTACCGCCTC CTGCGTCTAGAGCTGAACAACCGCCAGTCAGCGCCACCTCCTCGCGACCT GTGGCGCTCGGAGCCCAAGACCGGTCCGTTTCGGGTGGCGTTCCTGCCGT CGTCCGGTCCCAACCGGCGCGACTTCCTTGTGGTTGGCTACGGCGCGGAG CTGGTGGCGGTGGATGCCGCCACCGGCAAATCGACGCTGGTTGCCACCAA TTTTCCGGCAATTACCGCGCTGGCGGCGGACGCGGAGACAGGCCAGGTGG CCTCAGGTCACCGCAGCGGCGGCATCACGCTCTGGCACAACGTTGGCGAC GTGCCGGCAGTCCTGGAGCTGGAGGCGGCGGCGGCAGCGGCAGCAACAGA GACTGCCACGGCGGCGGCGGCGGCGGCGGCGTCTGCGGCGGGGGCTGCGG CGACGGCAGCGAAGAAGGGCAAGAAAACGGCACCTGGCGCGTCCAACGCG GCGGCCGCCTCAACTGCGGCGGCGGCGACTGCGGCGGAGGCCACGGTGGC GGCATCAGCGGCAGAAACGTACTCGGGGCGGCAAGGGTGGCGGCAGCCCG CGCCGCGGCGCGTCGCCAGCACGCTGCTGCACTGGCACAGCCACGCCGTC ACGTGCCTCGCCTACGGCGGCGGCGGCATGGGGTCGACTTACCTCTACTC CGGCGGTGAGGAGGCCGTGCTGGTGCAGTGGAACCTGGGCAAGAACTCGC AGGCGTTCCTGCCGCGGCTGGAGGCGCCGCTTACCGCCATCGCCGCGTCG CCCGACGGCACGCGGGTGGTGGCCACCGCCACCAACAACAGCGCCGCCGT CGTCTCCCTCTTCAACTGGGAGGTCGCCTGGCAGCTTCGCGGGCTCTGCC TGCAGTCCGGCGGCGGCGTCGGCATCGGTGACGGGCCCGGTGGCCGGCGC CTGCTGCGCGTGGCGCTGGACCCGCACGGGCGCCTCGCCGTCAATGGTCT GCCGGGGAGGTTGCAGTTTTACGACCCTGCGGCGGATCTGCTGAGCGATG CACTCGAAGTCGTGGCGTACAACCGCGTGTCGCGATCGGACGCCGAGCCC GTCCCGGTGCCCGTGGTGCGCCATTGCTGCTTCAGCCGCGATGGCGCCTG GCTGGTCACGGTGGATTCCCGGCAAGACAGCCTCGCCCGCAGACCCGGCC GCGGCGGCGGCGTCAGCGTCGGCGGCCGCGCCGGCGCCGCCGCCGCTGCC GCCGCCGGACGCGAGCCGCCGCCACGCGAGTCGCTCAAGTTTTGGTGCCG CAACGGCGGCAGCAGGCGCCAGCGCTTCACGCTGGACACCGTGGCCGACC AGCCGCACGGCGGCAGCGGCGTCGCGGGGCTGGCATACCACCCGACGCGC GACGTCGTCGTGTCATGCGGGTCCGACGGCCTCTTTCGGCTTTGGGAGCT CGTGCCGATGGAGGCGGACGCGGCGACTGAAGCCATCTGTGGCGGCGGCA GTGGTGGCAGCGACGGTCGTGGCAGCGGCGGCGGTGGCGGCGGAGAAGGC GGAGGTGGCGGAGAGGGCGGCGGCGACGAACCGACGGCGGTTTTGTCGTG GTTGTGCCGGCTCCAGATCGGGTACAAGTCGGGCCTTGCGGCGACCGCGT GCGCTTTCTCCCCGGACGGCACCGTGGTAGCGGTGGCCTTCGGCAAGGTG GCGACGCTCTGGGACTCGGCGAGGGCGGCGCTGCTCTGGACGCTGGTGCC GCCGGCCGCCGGCAAGATCACGTCGCTCGCGTTCCTGCAGGGCACGCCGC ACCTGGCGGCGGCGTCGCGGCAAGCGGTTGTTGTGTGGGACATTCTAAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7467:440..2389-

>mRNA_P-wetherbeei_contig7467.2.1 ID=mRNA_P-wetherbeei_contig7467.2.1|Name=mRNA_P-wetherbeei_contig7467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1950bp|location=Sequence derived from alignment at P-wetherbeei_contig7467:440..2389- (Phaeothamnion wetherbeei SAG_119_79)
GACGCTGGGTCGCCAGCAAAGCGGCTGAAAAAGGCAGGACCGCCAAACAA
GAGAAAACTCGCCACCAACGCTGCTGCTGCCGCTGCCGCCGCCGCTGCGG
CCCGACTTAGGCAGCAGCGCCTCGGGCGCGGCCCAAAAATGTACCGCCTC
CTGCGTCTAGAGCTGAACAACCGCCAGTCAGCGCCACCTCCTCGCGACCT
GTGGCGCTCGGAGCCCAAGACCGGTCCGTTTCGGGTGGCGTTCCTGCCGT
CGTCCGGTCCCAACCGGCGCGACTTCCTTGTGGTTGGCTACGGCGCGGAG
CTGGTGGCGGTGGATGCCGCCACCGGCAAATCGACGCTGGTTGCCACCAA
TTTTCCGGCAATTACCGCGCTGGCGGCGGACGCGGAGACAGGCCAGGTGG
CCTCAGGTCACCGCAGCGGCGGCATCACGCTCTGGCACAACGTTGGCGAC
GTGCCGGCAGTCCTGGAGCTGGAGGCGGCGGCGGCAGCGGCAGCAACAGA
GACTGCCACGGCGGCGGCGGCGGCGGCGGCGTCTGCGGCGGGGGCTGCGG
CGACGGCAGCGAAGAAGGGCAAGAAAACGGCACCTGGCGCGTCCAACGCG
GCGGCCGCCTCAACTGCGGCGGCGGCGACTGCGGCGGAGGCCACGGTGGC
GGCATCAGCGGCAGAAACGTACTCGGGGCGGCAAGGGTGGCGGCAGCCCG
CGCCGCGGCGCGTCGCCAGCACGCTGCTGCACTGGCACAGCCACGCCGTC
ACGTGCCTCGCCTACGGCGGCGGCGGCATGGGGTCGACTTACCTCTACTC
CGGCGGTGAGGAGGCCGTGCTGGTGCAGTGGAACCTGGGCAAGAACTCGC
AGGCGTTCCTGCCGCGGCTGGAGGCGCCGCTTACCGCCATCGCCGCGTCG
CCCGACGGCACGCGGGTGGTGGCCACCGCCACCAACAACAGCGCCGCCGT
CGTCTCCCTCTTCAACTGGGAGGTCGCCTGGCAGCTTCGCGGGCTCTGCC
TGCAGTCCGGCGGCGGCGTCGGCATCGGTGACGGGCCCGGTGGCCGGCGC
CTGCTGCGCGTGGCGCTGGACCCGCACGGGCGCCTCGCCGTCAATGGTCT
GCCGGGGAGGTTGCAGTTTTACGACCCTGCGGCGGATCTGCTGAGCGATG
CACTCGAAGTCGTGGCGTACAACCGCGTGTCGCGATCGGACGCCGAGCCC
GTCCCGGTGCCCGTGGTGCGCCATTGCTGCTTCAGCCGCGATGGCGCCTG
GCTGGTCACGGTGGATTCCCGGCAAGACAGCCTCGCCCGCAGACCCGGCC
GCGGCGGCGGCGTCAGCGTCGGCGGCCGCGCCGGCGCCGCCGCCGCTGCC
GCCGCCGGACGCGAGCCGCCGCCACGCGAGTCGCTCAAGTTTTGGTGCCG
CAACGGCGGCAGCAGGCGCCAGCGCTTCACGCTGGACACCGTGGCCGACC
AGCCGCACGGCGGCAGCGGCGTCGCGGGGCTGGCATACCACCCGACGCGC
GACGTCGTCGTGTCATGCGGGTCCGACGGCCTCTTTCGGCTTTGGGAGCT
CGTGCCGATGGAGGCGGACGCGGCGACTGAAGCCATCTGTGGCGGCGGCA
GTGGTGGCAGCGACGGTCGTGGCAGCGGCGGCGGTGGCGGCGGAGAAGGC
GGAGGTGGCGGAGAGGGCGGCGGCGACGAACCGACGGCGGTTTTGTCGTG
GTTGTGCCGGCTCCAGATCGGGTACAAGTCGGGCCTTGCGGCGACCGCGT
GCGCTTTCTCCCCGGACGGCACCGTGGTAGCGGTGGCCTTCGGCAAGGTG
GCGACGCTCTGGGACTCGGCGAGGGCGGCGCTGCTCTGGACGCTGGTGCC
GCCGGCCGCCGGCAAGATCACGTCGCTCGCGTTCCTGCAGGGCACGCCGC
ACCTGGCGGCGGCGTCGCGGCAAGCGGTTGTTGTGTGGGACATTCTAAGC
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