mRNA_P-wetherbeei_contig745.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig745.4.1
Unique NamemRNA_P-wetherbeei_contig745.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig745.4.1 vs. uniprot
Match: D7FXM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM5_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.350e-36
Identity = 61/136 (44.85%), Postives = 94/136 (69.12%), Query Frame = 3
Query:  195 QERAIANLERAYIKLAPSRVGGIGAFAVVAIARSTIIFKWDWSRWPCIVVPLATLQQRVPSQTLDQLRRIWPIVDNGRALSCPLDFSGTITYVNYLNHSSDPNVAYLPAEGAYVAINDVAECEELTIDY-RDYAPG 599
            +E AI+NL+ AY++LAPS + G+G FA+  IA    + +WDW ++  + +P   L++RVP +  DQLRRIW +  +G+ ++ PLDF+ T++Y+N+LNHS  PN+++  ++G YV    VA  EEL I+Y RDY PG
Sbjct:   15 KEEAISNLQSAYVRLAPSSLEGVGVFAMRDIAEGVEVMRWDWHKYASVFIPGEELRERVPKEVFDQLRRIWHVDQHGQ-VATPLDFTSTLSYINFLNHSDQPNLSFRYSDGGYVTSRTVARGEELFINYDRDYYPG 149          
BLAST of mRNA_P-wetherbeei_contig745.4.1 vs. uniprot
Match: A0A2M7IH61_9BACT (SET domain-containing protein n=5 Tax=Parcubacteria group TaxID=1794811 RepID=A0A2M7IH61_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.740e-6
Identity = 38/127 (29.92%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  219 ERAYIKLAPSRVGGIGAFAVVAIARSTIIFKWDWSRWPCIVVPLATLQQRVPSQTLDQLRRIWPIVDNGRALSCPLDFSGTITYVNYLNHSSDPNVAYLPAEGAYVAINDVAECEELTIDYRDYAPG 599
            E  Y +L PS++ G+G FAV  I   T IFK         V P    + +  ++ + ++ + + ++   R L  P      I    +LN S +PNV     E  + A+ D+ + EELT+DY +Y+ G
Sbjct:   16 ENIYCRLRPSKIEGVGVFAVRDIPEGTNIFKLTRKTKFIAVNPKLVFENQKINKEIKKMVKDFYVITK-RKLYLPNFSLNEIDISFFLNRSDNPNVIDKDGE-EFFALRDIKKGEELTVDYGNYSNG 140          
BLAST of mRNA_P-wetherbeei_contig745.4.1 vs. uniprot
Match: A0A1F8FRY3_9BACT (SET domain-containing protein n=2 Tax=Candidatus Yanofskybacteria TaxID=1752733 RepID=A0A1F8FRY3_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 2.070e-6
Identity = 37/140 (26.43%), Postives = 67/140 (47.86%), Query Frame = 3
Query:  183 LGDLQERAIANLERAYIKLAPSRVGGIGAFAVVAIARSTIIFKWDWSRWPCIVVPLATLQQRVPSQTLDQLRRIWP--IVDNGRALSCPLDFSGTITYVNYLNHSSDPNVAYLPAEGAY--VAINDVAECEELTIDYRDY 590
            + + + + ++  +  Y++L PS++ G+G FA+  I   T  FK    +       +  + +R       +L++++    V  G    CP +F+  +    YLNHS  PN+     +G Y   A  D+ + EE+TIDY  Y
Sbjct:    1 MANQKRKPLSPHQDVYVRLRPSKIHGVGCFAICDIPAGTDPFKQSGGK-------MIWVSRRSLRGLPRELKKLYGDFCVRKGNKYGCPANFN-QLDVSWYLNHSKKPNMVCRVEKGVYNFYAARDIRKGEEITIDYYKY 132          
BLAST of mRNA_P-wetherbeei_contig745.4.1 vs. uniprot
Match: A0A832H7K6_9BACT (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A832H7K6_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 7.740e-6
Identity = 36/135 (26.67%), Postives = 65/135 (48.15%), Query Frame = 3
Query:  189 DLQERAIANLERAYIKLAPSRVGGIGAFAVVAIARSTIIFKW-DWSRWPCIVVPLATLQQRVPSQTLDQLRRIWPIVDNGRALSCPLDFSGTITYVNYLNHSSDPNVAYLPAEGAYVAINDVAECEELTIDYRDY 590
            + +++ +A L+  Y +L PS++ G+G FAV  I   T  FK  +  RW      +  L+  +    L  +   +    +G         +G I    +LN SS PN+  +     ++A+ ++ + EELT+DY+ Y
Sbjct:    3 EAKKKILAKLKNTYCRLGPSKIHGVGVFAVRNIPAGTNPFKGLERRRW--YKFKMEELKH-LDGAVLKMIDDFFGFEKDGTVFLPECGLNG-IDISFFLNSSSSPNLKTIDGGSVFIALREIKKGEELTVDYKTY 133          
BLAST of mRNA_P-wetherbeei_contig745.4.1 vs. uniprot
Match: A0A7S2HG22_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2HG22_9DINO)

HSP 1 Score: 52.4 bits (124), Expect = 4.080e-5
Identity = 49/149 (32.89%), Postives = 65/149 (43.62%), Query Frame = 3
Query:  225 AYIKLAPSRVGGIGAFAVVAIARSTIIFKWDWSRWPCIVVP-LATLQQRVPSQTLDQLRRIWPIVDNGRALSCPL----------DFSGTITY---------VN---YLNHSSDPNVAYLPAEG-----AYVAINDVAECEELTIDYRD 587
            ++++LAPSRV G+G FAV  I      F         +  P LAT +Q       D      PI+D  ++   PL          D +G I Y         +N   YLNHS  PNVA+  AE      +YV    + E EEL  DYR+
Sbjct:    2 SFVQLAPSRVAGVGVFAVRPIPAGVDPFS--------VCNPHLATKEQFCVCSAKDLADVPLPIMDQVKSFFAPLTEDDGWTPQRDDAGHILYGVVATGLNSLNTSWYLNHSDTPNVAFKDAENEGEFNSYVTKRRIEEGEELIADYRE 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig745.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXM5_ECTSI2.350e-3644.85SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2M7IH61_9BACT1.740e-629.92SET domain-containing protein n=5 Tax=Parcubacteri... [more]
A0A1F8FRY3_9BACT2.070e-626.43SET domain-containing protein n=2 Tax=Candidatus Y... [more]
A0A832H7K6_9BACT7.740e-626.67SET domain-containing protein-lysine N-methyltrans... [more]
A0A7S2HG22_9DINO4.080e-532.89Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig745contigP-wetherbeei_contig745:5991..6633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000038_gene1770
PFAMsAnk,SET
Model size643
Max annot lvl2|Bacteria
KEGG koko:K07117
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.26e-09
EggNOG OGsCOG2940@1|root,COG2940@2|Bacteria
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-28_002300.1
DescriptionSET domain
Cds size498
COG categoryK
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186982.311289-UTR-P-wetherbeei_contig745:5990..60101683186982.311289-UTR-P-wetherbeei_contig745:5990..6010Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig745 5991..6010 -
1683186982.3343978-UTR-P-wetherbeei_contig745:6508..66331683186982.3343978-UTR-P-wetherbeei_contig745:6508..6633Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig745 6509..6633 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186982.3234494-CDS-P-wetherbeei_contig745:6010..65081683186982.3234494-CDS-P-wetherbeei_contig745:6010..6508Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig745 6011..6508 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig745.4.1prot_P-wetherbeei_contig745.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig745 6011..6508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig745.4.1

>prot_P-wetherbeei_contig745.4.1 ID=prot_P-wetherbeei_contig745.4.1|Name=mRNA_P-wetherbeei_contig745.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
MGGNVSWMRGRIDQMDDDGLGDLQERAIANLERAYIKLAPSRVGGIGAFA
VVAIARSTIIFKWDWSRWPCIVVPLATLQQRVPSQTLDQLRRIWPIVDNG
RALSCPLDFSGTITYVNYLNHSSDPNVAYLPAEGAYVAINDVAECEELTI
DYRDYAPGNIDWDER*
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mRNA from alignment at P-wetherbeei_contig745:5991..6633-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig745.4.1 ID=mRNA_P-wetherbeei_contig745.4.1|Name=mRNA_P-wetherbeei_contig745.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=643bp|location=Sequence derived from alignment at P-wetherbeei_contig745:5991..6633- (Phaeothamnion wetherbeei SAG_119_79)
CCCCTCCCCGAGGAGACCACAGAATACTGGTAACTTCTTCAGAGTCCGCA AGCTACGAAACGTCGACCCCCAAGAAACGTCTTCAAACAAAAGGTGCTTG TCCTTCCTAATCCGGCGGACCTCAGATGGGCGGCAACGTCTCGTGGATGA GAGGAAGAATAGACCAGATGGACGACGATGGTTTGGGCGATTTGCAGGAA CGAGCGATCGCCAACCTCGAGAGAGCGTACATCAAGCTCGCGCCATCCCG AGTAGGAGGAATCGGCGCATTTGCCGTGGTTGCCATTGCACGTTCCACCA TCATCTTCAAATGGGACTGGTCGCGTTGGCCGTGCATAGTCGTCCCTTTG GCAACGCTGCAGCAGCGGGTGCCCAGCCAAACTTTGGATCAACTGAGACG CATCTGGCCCATCGTCGACAACGGGCGAGCGCTCTCTTGCCCACTAGACT TCTCAGGGACCATAACTTATGTCAATTATTTGAACCATTCAAGCGATCCA AATGTGGCTTACCTGCCAGCTGAAGGAGCATATGTTGCGATAAATGATGT AGCAGAGTGCGAGGAACTCACAATAGACTACCGTGACTACGCTCCTGGCA ACATAGATTGGGACGAGAGATAGGCAAGCCGCATCTGATGAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig745:5991..6633-

>mRNA_P-wetherbeei_contig745.4.1 ID=mRNA_P-wetherbeei_contig745.4.1|Name=mRNA_P-wetherbeei_contig745.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig745:5991..6633- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGGCAACGTCTCGTGGATGAGAGGAAGAATAGACCAGATGGACGA
CGATGGTTTGGGCGATTTGCAGGAACGAGCGATCGCCAACCTCGAGAGAG
CGTACATCAAGCTCGCGCCATCCCGAGTAGGAGGAATCGGCGCATTTGCC
GTGGTTGCCATTGCACGTTCCACCATCATCTTCAAATGGGACTGGTCGCG
TTGGCCGTGCATAGTCGTCCCTTTGGCAACGCTGCAGCAGCGGGTGCCCA
GCCAAACTTTGGATCAACTGAGACGCATCTGGCCCATCGTCGACAACGGG
CGAGCGCTCTCTTGCCCACTAGACTTCTCAGGGACCATAACTTATGTCAA
TTATTTGAACCATTCAAGCGATCCAAATGTGGCTTACCTGCCAGCTGAAG
GAGCATATGTTGCGATAAATGATGTAGCAGAGTGCGAGGAACTCACAATA
GACTACCGTGACTACGCTCCTGGCAACATAGATTGGGACGAGAGATAG
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