mRNA_P-wetherbeei_contig7447.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A7X9AER8_9BURK (Tetratricopeptide repeat protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AER8_9BURK) HSP 1 Score: 229 bits (583), Expect = 1.240e-68 Identity = 130/357 (36.41%), Postives = 204/357 (57.14%), Query Frame = 1
Query: 4 PARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDPEEHEAEFMYGSILKGDGSTVDAYNIYKKLAGMNYRKSDCLYQMGFIDLQIDRPEQGLKELKESAEIDPNGPAKALIAEYERTMPKLA-----PAGTPFQG---MPLPTSAKGPEVSPRDVAEAKVYFDEGEASFKAGDMTKAKTGYLRAIQKNPAMAKAYSSLGAVLYREGDLNEAISKLSSASQLDSKDKETLRCLGYCFERRFDTKGDRLDLDKAIAYFQQVAKASPLDPQS---KTEVDRVMNK 1041
PARAADE+ Q+ +LK+ F +W ++ +N+ +LD SFFER + RIRWG+++ Q++DA+RF+ VAD + + +K T YR+ + FL+ N M DL+ N+++ DP+ E F S++ G+ VD+Y +Y LA YR+S+CLY+M I+L+ + + + L+E+ +DP E +R + L+ P T G +P + A ++P A+ +FDE E + + G++ +A + AIQ NP M KA+ LGAV ++ +L AI L A +LD +D E R LGYCFERR+D + DL +A F AKA LDPQ+ K +++R+ K
Sbjct: 23 PARAADESLQVMMLKKLFASSTLQWREILEQNRKILDNSFFERVERRIRWGLDHGQVEDAVRFAVVADMSGLIVNRK-TNYRLEMAKMFLRLGNIQMTMDLVDNILVMDPKNQEVRFYKASVVHDGGNLVDSYMLYDALAKEGYRRSECLYRMALIELRREEQDVARRHLEEAIRLDPQN--TLARQELDRLLKALSSARFVPGETGSSGGTDLPPFSGAGAASLTPEQKVRAQSFFDEAEMARQQGNLARAADLFNNAIQANPQMVKAHVYLGAVYFQLRNLEPAIRVLEEACRLDPQDAEAWRYLGYCFERRYDANQEATDLTRASEAF---AKAGVLDPQNALLKMDLERIRTK 373
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A1E4EXD6_9BACT (Uncharacterized protein n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4EXD6_9BACT) HSP 1 Score: 194 bits (494), Expect = 1.690e-55 Identity = 118/355 (33.24%), Postives = 193/355 (54.37%), Query Frame = 1
Query: 1 MPARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDPEEHEAEFMYGSILKGDGSTVDAYNIYKKLAGMNYRKSDCLYQMGFIDLQIDRPEQGLKELKESAEIDPNGPAKALIAEYERTMPKLAPAGTPFQGMPLPTSAKGPE--VSPRDVAEAKVYFDEGEASFKAGDMTKAKTGYLRAIQKNPAMAKAYSSLGAVLYREGDLNEAISKLSSASQLDSKDKETLRCLGYCFERRFDTKGDRLDLDKAIAYFQQVAKASPLDPQSKTEVDRVMNKKTPSAS 1059
+PA A DE Q+Q+LKQ FR+ Q +WP + +N L+D+SFFER D RIRW + NQ++DAIRF+ V D A G++G YR+ L+ AF KA N +A+ L+ N+++TDP A F+ + + T A Y+ NY+ + C Y + I++ +++ + K +++ IDPN P + E +LAP F G+P+ +A GP+ V P+ + YF + EA+ +AG + +A+ Y+ AI + A + L A+ YR G L+ + +L + L+ K + R +G C+ER +D L +A +Q+ P DP + ++R+ KK +A+
Sbjct: 22 LPALAVDEGLQVQMLKQMFRLDQAQWPQTLKDNAGLIDESFFERIDQRIRWSAQANQVEDAIRFAMVGDFACDAIGRQGG-YRLGLIEAFTKAGNPDLAQGLVDNILITDPNNIPAHFLRANFRRDAMDTGGAVEDYQWCISHNYQTAACYYYLAAINVVMEKQPEARKFVEQCLAIDPNFPGARGLLE------RLAPMAEGFDGIPVVGNA-GPQRKVDPKQHDQ---YFAKAEAALRAGKLKEAEDSYVDAINADKNHADDWIYLAALHYRTGKLDLGLKELKTGLTLEPKRVDGWRYVGCCYERMYDRTQSADQLKEAKYAYQRALDLQPGDPVATMGLERLSGKKPKAAN 365
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A7Z9UD17_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UD17_9BACT) HSP 1 Score: 109 bits (273), Expect = 3.180e-25 Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = 1
Query: 10 RAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDP---EEHEAEFMYGSILKGDGSTVDAYNIYKKLAGMNYRKSDCLYQ 459
+A T+Q+++L++ FR EW +M E++ LLD +FFE + R+RWGIENN +DDA RF+ V D +V G+ YR+ L FLKA N M ++ N++LT P A ++ G + + D A+ +++LA Y+ +D Y+
Sbjct: 21 QAQAATSQVEMLREMFRKPASEWKQVMQESRALLDANFFENVEKRVRWGIENNHVDDAFRFAMVGDFGSEVKGRPAN-YRIDLAELFLKAENRTMTGQIVDNILLTSPGTPAARRAMYLRGELYEMDKQLYQAHQAFRELAESGYKPADTWYK 172
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A355TVP7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TVP7_9BACT) HSP 1 Score: 100 bits (248), Expect = 4.570e-22 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1
Query: 4 PARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDPE 336
P +AADE +Q+ +L++ F WP ++ N L+D+SFFER +ARI+W I+N Q++DA+RF+ V D A + G+K T YRM + F K N M+ DL+ NV + +P+
Sbjct: 24 PVQAADEASQVLMLRRVFSAPVEAWPTVLKNNTRLIDKSFFERVEARIKWSIDNGQVEDAVRFAYVGDLAGQAVGRK-TDYRMQMSQLFRKLGNFSMSLDLINNVCILEPD 133
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: G0R3F4_ICHMG (Uncharacterized protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R3F4_ICHMG) HSP 1 Score: 57.4 bits (137), Expect = 2.640e-5 Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 1
Query: 661 RDVAE--AKVYFDEGEASFKAGDMTKAKTGYLRAIQKNPAMAKAYSSLGAVLYREGDLNEAISK----LSSASQLDSKDKETLRCLGYCFERRFDTKGDRLDLDKAIAYFQ 975
+DV E A VYF++G A ++ G+M KA T YL+A++++P++ A+ LG +L + EAI K LS+ ++ D + + LGYCF + D A+ +FQ
Sbjct: 653 KDVFEELAIVYFNKGMALYQKGEMEKAVTEYLQALEQDPSLKAAHFQLGCILVDKKKYQEAIEKFYTSLSTENEDDVYNAKVHNDLGYCFTQLGD-------FQNAVNHFQ 756 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7447.1.1 >prot_P-wetherbeei_contig7447.1.1 ID=prot_P-wetherbeei_contig7447.1.1|Name=mRNA_P-wetherbeei_contig7447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=355bp MPARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRback to top mRNA from alignment at P-wetherbeei_contig7447:754..1818- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7447.1.1 ID=mRNA_P-wetherbeei_contig7447.1.1|Name=mRNA_P-wetherbeei_contig7447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1065bp|location=Sequence derived from alignment at P-wetherbeei_contig7447:754..1818- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7447:754..1818- >mRNA_P-wetherbeei_contig7447.1.1 ID=mRNA_P-wetherbeei_contig7447.1.1|Name=mRNA_P-wetherbeei_contig7447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1065bp|location=Sequence derived from alignment at P-wetherbeei_contig7447:754..1818- (Phaeothamnion wetherbeei SAG_119_79)back to top |