mRNA_P-wetherbeei_contig7447.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7447.1.1
Unique NamemRNA_P-wetherbeei_contig7447.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A7X9AER8_9BURK (Tetratricopeptide repeat protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AER8_9BURK)

HSP 1 Score: 229 bits (583), Expect = 1.240e-68
Identity = 130/357 (36.41%), Postives = 204/357 (57.14%), Query Frame = 1
Query:    4 PARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDPEEHEAEFMYGSILKGDGSTVDAYNIYKKLAGMNYRKSDCLYQMGFIDLQIDRPEQGLKELKESAEIDPNGPAKALIAEYERTMPKLA-----PAGTPFQG---MPLPTSAKGPEVSPRDVAEAKVYFDEGEASFKAGDMTKAKTGYLRAIQKNPAMAKAYSSLGAVLYREGDLNEAISKLSSASQLDSKDKETLRCLGYCFERRFDTKGDRLDLDKAIAYFQQVAKASPLDPQS---KTEVDRVMNK 1041
            PARAADE+ Q+ +LK+ F     +W  ++ +N+ +LD SFFER + RIRWG+++ Q++DA+RF+ VAD +  +  +K T YR+ +   FL+  N  M  DL+ N+++ DP+  E  F   S++   G+ VD+Y +Y  LA   YR+S+CLY+M  I+L+ +  +   + L+E+  +DP         E +R +  L+     P  T   G   +P  + A    ++P     A+ +FDE E + + G++ +A   +  AIQ NP M KA+  LGAV ++  +L  AI  L  A +LD +D E  R LGYCFERR+D   +  DL +A   F   AKA  LDPQ+   K +++R+  K
Sbjct:   23 PARAADESLQVMMLKKLFASSTLQWREILEQNRKILDNSFFERVERRIRWGLDHGQVEDAVRFAVVADMSGLIVNRK-TNYRLEMAKMFLRLGNIQMTMDLVDNILVMDPKNQEVRFYKASVVHDGGNLVDSYMLYDALAKEGYRRSECLYRMALIELRREEQDVARRHLEEAIRLDPQN--TLARQELDRLLKALSSARFVPGETGSSGGTDLPPFSGAGAASLTPEQKVRAQSFFDEAEMARQQGNLARAADLFNNAIQANPQMVKAHVYLGAVYFQLRNLEPAIRVLEEACRLDPQDAEAWRYLGYCFERRYDANQEATDLTRASEAF---AKAGVLDPQNALLKMDLERIRTK 373          
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A1E4EXD6_9BACT (Uncharacterized protein n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4EXD6_9BACT)

HSP 1 Score: 194 bits (494), Expect = 1.690e-55
Identity = 118/355 (33.24%), Postives = 193/355 (54.37%), Query Frame = 1
Query:    1 MPARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDPEEHEAEFMYGSILKGDGSTVDAYNIYKKLAGMNYRKSDCLYQMGFIDLQIDRPEQGLKELKESAEIDPNGPAKALIAEYERTMPKLAPAGTPFQGMPLPTSAKGPE--VSPRDVAEAKVYFDEGEASFKAGDMTKAKTGYLRAIQKNPAMAKAYSSLGAVLYREGDLNEAISKLSSASQLDSKDKETLRCLGYCFERRFDTKGDRLDLDKAIAYFQQVAKASPLDPQSKTEVDRVMNKKTPSAS 1059
            +PA A DE  Q+Q+LKQ FR+ Q +WP  + +N  L+D+SFFER D RIRW  + NQ++DAIRF+ V D A    G++G  YR+ L+ AF KA N  +A+ L+ N+++TDP    A F+  +  +    T  A   Y+     NY+ + C Y +  I++ +++  +  K +++   IDPN P    + E      +LAP    F G+P+  +A GP+  V P+   +   YF + EA+ +AG + +A+  Y+ AI  +   A  +  L A+ YR G L+  + +L +   L+ K  +  R +G C+ER +D       L +A   +Q+     P DP +   ++R+  KK  +A+
Sbjct:   22 LPALAVDEGLQVQMLKQMFRLDQAQWPQTLKDNAGLIDESFFERIDQRIRWSAQANQVEDAIRFAMVGDFACDAIGRQGG-YRLGLIEAFTKAGNPDLAQGLVDNILITDPNNIPAHFLRANFRRDAMDTGGAVEDYQWCISHNYQTAACYYYLAAINVVMEKQPEARKFVEQCLAIDPNFPGARGLLE------RLAPMAEGFDGIPVVGNA-GPQRKVDPKQHDQ---YFAKAEAALRAGKLKEAEDSYVDAINADKNHADDWIYLAALHYRTGKLDLGLKELKTGLTLEPKRVDGWRYVGCCYERMYDRTQSADQLKEAKYAYQRALDLQPGDPVATMGLERLSGKKPKAAN 365          
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A7Z9UD17_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UD17_9BACT)

HSP 1 Score: 109 bits (273), Expect = 3.180e-25
Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = 1
Query:   10 RAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDP---EEHEAEFMYGSILKGDGSTVDAYNIYKKLAGMNYRKSDCLYQ 459
            +A   T+Q+++L++ FR    EW  +M E++ LLD +FFE  + R+RWGIENN +DDA RF+ V D   +V G+    YR+ L   FLKA N  M   ++ N++LT P       A ++ G + + D     A+  +++LA   Y+ +D  Y+
Sbjct:   21 QAQAATSQVEMLREMFRKPASEWKQVMQESRALLDANFFENVEKRVRWGIENNHVDDAFRFAMVGDFGSEVKGRPAN-YRIDLAELFLKAENRTMTGQIVDNILLTSPGTPAARRAMYLRGELYEMDKQLYQAHQAFRELAESGYKPADTWYK 172          
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: A0A355TVP7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TVP7_9BACT)

HSP 1 Score: 100 bits (248), Expect = 4.570e-22
Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1
Query:    4 PARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIRWGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAKDLLINVMLTDPE 336
            P +AADE +Q+ +L++ F      WP ++  N  L+D+SFFER +ARI+W I+N Q++DA+RF+ V D A +  G+K T YRM +   F K  N  M+ DL+ NV + +P+
Sbjct:   24 PVQAADEASQVLMLRRVFSAPVEAWPTVLKNNTRLIDKSFFERVEARIKWSIDNGQVEDAVRFAYVGDLAGQAVGRK-TDYRMQMSQLFRKLGNFSMSLDLINNVCILEPD 133          
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Match: G0R3F4_ICHMG (Uncharacterized protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R3F4_ICHMG)

HSP 1 Score: 57.4 bits (137), Expect = 2.640e-5
Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 1
Query:  661 RDVAE--AKVYFDEGEASFKAGDMTKAKTGYLRAIQKNPAMAKAYSSLGAVLYREGDLNEAISK----LSSASQLDSKDKETLRCLGYCFERRFDTKGDRLDLDKAIAYFQ 975
            +DV E  A VYF++G A ++ G+M KA T YL+A++++P++  A+  LG +L  +    EAI K    LS+ ++ D  + +    LGYCF +  D          A+ +FQ
Sbjct:  653 KDVFEELAIVYFNKGMALYQKGEMEKAVTEYLQALEQDPSLKAAHFQLGCILVDKKKYQEAIEKFYTSLSTENEDDVYNAKVHNDLGYCFTQLGD-------FQNAVNHFQ 756          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7447.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7X9AER8_9BURK1.240e-6836.41Tetratricopeptide repeat protein n=1 Tax=Burkholde... [more]
A0A1E4EXD6_9BACT1.690e-5533.24Uncharacterized protein n=1 Tax=bacterium SCN 62-1... [more]
A0A7Z9UD17_9BACT3.180e-2535.95Uncharacterized protein (Fragment) n=1 Tax=Phycisp... [more]
A0A355TVP7_9BACT4.570e-2242.34Uncharacterized protein (Fragment) n=1 Tax=bacteri... [more]
G0R3F4_ICHMG2.640e-534.23Uncharacterized protein n=1 Tax=Ichthyophthirius m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7447contigP-wetherbeei_contig7447:754..1818 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5932.XP_004027350.1
PFAMsPkinase,TPR_1,TPR_11,TPR_17,TPR_19,TPR_2,TPR_8,zf-B_box
Model size1065
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.32e-06
EggNOG OGsCOG3914@1|root,KOG4626@2759|Eukaryota
Descriptionprotein N-acetylglucosaminyltransferase activity
Cds size1065
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186981.9821887-CDS-P-wetherbeei_contig7447:753..18181683186981.9821887-CDS-P-wetherbeei_contig7447:753..1818Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7447 754..1818 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7447.1.1prot_P-wetherbeei_contig7447.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7447 754..1818 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7447.1.1

>prot_P-wetherbeei_contig7447.1.1 ID=prot_P-wetherbeei_contig7447.1.1|Name=mRNA_P-wetherbeei_contig7447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=355bp
MPARAADETAQIQLLKQAFRMMQPEWPALMNENKNLLDQSFFERCDARIR
WGIENNQIDDAIRFSTVADTAMKVTGQKGTVYRMTLVYAFLKANNAIMAK
DLLINVMLTDPEEHEAEFMYGSILKGDGSTVDAYNIYKKLAGMNYRKSDC
LYQMGFIDLQIDRPEQGLKELKESAEIDPNGPAKALIAEYERTMPKLAPA
GTPFQGMPLPTSAKGPEVSPRDVAEAKVYFDEGEASFKAGDMTKAKTGYL
RAIQKNPAMAKAYSSLGAVLYREGDLNEAISKLSSASQLDSKDKETLRCL
GYCFERRFDTKGDRLDLDKAIAYFQQVAKASPLDPQSKTEVDRVMNKKTP
SASR*
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mRNA from alignment at P-wetherbeei_contig7447:754..1818-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7447.1.1 ID=mRNA_P-wetherbeei_contig7447.1.1|Name=mRNA_P-wetherbeei_contig7447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1065bp|location=Sequence derived from alignment at P-wetherbeei_contig7447:754..1818- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGCGCGAGCTGCGGACGAGACCGCTCAGATTCAGCTACTGAAGCA GGCTTTTCGTATGATGCAGCCTGAGTGGCCTGCACTCATGAATGAAAACA AGAATTTGCTGGACCAGAGTTTCTTCGAGCGTTGCGATGCCCGTATCCGT TGGGGAATCGAGAATAACCAGATCGATGACGCGATTCGGTTTTCCACCGT AGCCGATACAGCGATGAAAGTGACCGGCCAGAAGGGCACGGTTTATCGCA TGACGCTGGTCTACGCATTCCTCAAGGCCAACAATGCGATTATGGCCAAG GATCTGCTCATCAACGTGATGCTGACCGATCCCGAAGAGCATGAGGCCGA GTTCATGTATGGCAGCATTCTTAAGGGCGACGGCTCAACGGTCGATGCTT ACAACATCTACAAAAAGCTGGCCGGGATGAACTACCGCAAGAGCGACTGC TTGTATCAGATGGGGTTCATCGATTTGCAAATCGATCGCCCCGAGCAAGG GCTTAAGGAGCTCAAAGAATCGGCTGAAATCGATCCGAACGGTCCCGCGA AGGCTCTGATTGCAGAATACGAGCGCACCATGCCCAAGTTGGCTCCGGCG GGCACCCCGTTTCAGGGAATGCCTTTGCCCACTTCCGCAAAAGGACCGGA AGTGTCTCCCAGAGATGTGGCAGAGGCCAAGGTGTATTTCGACGAGGGGG AAGCCAGCTTCAAGGCCGGAGATATGACCAAAGCCAAGACTGGATACCTC CGCGCGATCCAGAAGAACCCCGCGATGGCGAAGGCTTATTCCTCGCTCGG TGCCGTGCTCTACAGAGAGGGCGATCTCAACGAGGCCATTTCCAAACTCT CGAGTGCCTCTCAGCTTGATAGCAAGGACAAGGAGACCCTGCGTTGTCTG GGTTACTGCTTCGAGCGGCGTTTCGACACCAAAGGCGACCGTCTCGATCT CGACAAGGCCATCGCCTATTTCCAGCAGGTGGCCAAAGCCTCACCCCTCG ATCCGCAGTCAAAAACGGAAGTCGACAGAGTGATGAACAAAAAGACCCCT TCGGCCAGCCGTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7447:754..1818-

>mRNA_P-wetherbeei_contig7447.1.1 ID=mRNA_P-wetherbeei_contig7447.1.1|Name=mRNA_P-wetherbeei_contig7447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1065bp|location=Sequence derived from alignment at P-wetherbeei_contig7447:754..1818- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGCGCGAGCTGCGGACGAGACCGCTCAGATTCAGCTACTGAAGCA
GGCTTTTCGTATGATGCAGCCTGAGTGGCCTGCACTCATGAATGAAAACA
AGAATTTGCTGGACCAGAGTTTCTTCGAGCGTTGCGATGCCCGTATCCGT
TGGGGAATCGAGAATAACCAGATCGATGACGCGATTCGGTTTTCCACCGT
AGCCGATACAGCGATGAAAGTGACCGGCCAGAAGGGCACGGTTTATCGCA
TGACGCTGGTCTACGCATTCCTCAAGGCCAACAATGCGATTATGGCCAAG
GATCTGCTCATCAACGTGATGCTGACCGATCCCGAAGAGCATGAGGCCGA
GTTCATGTATGGCAGCATTCTTAAGGGCGACGGCTCAACGGTCGATGCTT
ACAACATCTACAAAAAGCTGGCCGGGATGAACTACCGCAAGAGCGACTGC
TTGTATCAGATGGGGTTCATCGATTTGCAAATCGATCGCCCCGAGCAAGG
GCTTAAGGAGCTCAAAGAATCGGCTGAAATCGATCCGAACGGTCCCGCGA
AGGCTCTGATTGCAGAATACGAGCGCACCATGCCCAAGTTGGCTCCGGCG
GGCACCCCGTTTCAGGGAATGCCTTTGCCCACTTCCGCAAAAGGACCGGA
AGTGTCTCCCAGAGATGTGGCAGAGGCCAAGGTGTATTTCGACGAGGGGG
AAGCCAGCTTCAAGGCCGGAGATATGACCAAAGCCAAGACTGGATACCTC
CGCGCGATCCAGAAGAACCCCGCGATGGCGAAGGCTTATTCCTCGCTCGG
TGCCGTGCTCTACAGAGAGGGCGATCTCAACGAGGCCATTTCCAAACTCT
CGAGTGCCTCTCAGCTTGATAGCAAGGACAAGGAGACCCTGCGTTGTCTG
GGTTACTGCTTCGAGCGGCGTTTCGACACCAAAGGCGACCGTCTCGATCT
CGACAAGGCCATCGCCTATTTCCAGCAGGTGGCCAAAGCCTCACCCCTCG
ATCCGCAGTCAAAAACGGAAGTCGACAGAGTGATGAACAAAAAGACCCCT
TCGGCCAGCCGTTAG
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