mRNA_P-wetherbeei_contig7441.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: D7FP83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP83_ECTSI) HSP 1 Score: 215 bits (548), Expect = 1.250e-67 Identity = 115/173 (66.47%), Postives = 138/173 (79.77%), Query Frame = 1
Query: 1 ANMGGGGASGGSGTFFEEIKTSLPGLADIFDPSVFDMKKLVGALLCFGLVAVMVYRLFVKKFVGEDDFFQDLGISYLDFELPDEIDEYYETKASQQEKEQNKELLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
A G G + G GTFFE +KTSLPGL D+FDPSVFD++ ++G L C L+A ++RLFV+K VGEDDFF DLGISY DF++PDE+D+YYE K + + + LR ALLKRAIADIPIILRMQ EGPG+YNMYQQAMIGEKEW AFQ AET+ISEEIESVQ EAD++E GW+
Sbjct: 7 AEAGMGDDTAGEGTFFESVKTSLPGL-DMFDPSVFDIRMVMGVLACVSLLAYAIFRLFVRKVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENP-DIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIEPGWS 177
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: A0A835Z738_9STRA (Pre protein translocase subunit Sec66-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z738_9STRA) HSP 1 Score: 190 bits (483), Expect = 6.430e-58 Identity = 100/161 (62.11%), Postives = 125/161 (77.64%), Query Frame = 1
Query: 34 SGTFFEEIKTSLPGLADIFDPSVFDMKKLVGALLCFGLVAVMVYRLFVKKFVGEDDFFQDLGISYLDFELPDEIDEYYETKASQQEKEQNKELLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGW 516
+G+ FE+IKTSLP L DIFDPSVFDM+ ++GAL FGL++ YRL++ K V DDF DLGISY DFELPDEI+EYYE K + + + LR LLKRAIADIPII+R+Q EGPGM N+YQQAMIG++EW+A+Q AE +I EEIE VQ EA+++E GW
Sbjct: 27 TGSVFEDIKTSLPRL-DIFDPSVFDMRMVLGALTLFGLLSYFAYRLYMNKVVAGDDFIADLGISYADFELPDEIEEYYEAKEAAGD---DATALRNPLLKRAIADIPIIMRLQKEGPGMQNLYQQAMIGDREWQAYQAAEALIGEEIEQVQAEAEEIEPGW 183
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: A0A1Z5KHC6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHC6_FISSO) HSP 1 Score: 107 bits (266), Expect = 5.650e-25 Identity = 71/187 (37.97%), Postives = 108/187 (57.75%), Query Frame = 1
Query: 19 GASGGSG-TFFEEIKTSLPGL---ADIFDPSVFDMKKLVGALLCFGLVAVMVYRLFVKKFVGEDDFFQDLGISYLDFELPDEIDEYYETKAS----------------QQEKEQNKELLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
G +GG G +FF++ T+ G+ AD DP+ + L+GA F ++ + K EDDFF +L + +LP E+DEYYETKA Q+ Q + LL +AL+KRAIADIP++ +Q E GM +Y Q+M K+WR++Q AE+++S+E+E V+ EAD++E GW+
Sbjct: 23 GDAGGEGESFFQD--TAQEGISPDADGIDPAFY----LLGA--AFAVIVIYFLXXRAKXXXSEDDFFAELDGDKFNLKLPSEVDEYYETKAKCEAAGWEPGQPIKDPKDQQATQPQRLLAQALMKRAIADIPMVQHIQKESSGMNKLYSQSMCSVKQWRSYQQAESLVSQEVEEVRAEADEIEPGWS 201
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: A0A7S3L5D8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5D8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.690e-21 Identity = 57/149 (38.26%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 118 LVGALLCFGLVAVMVYRLFVKKFVGEDDFFQDLGISYLDFELPDEIDEYYETK--------------ASQQEKEQNKE-LLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
L+GA++ F + ++ + K DDFF L + +LP E+DEYY+ K A+ QE ++ +AL+KRAIADIPI+ +Q E PGM +Y Q+M EK+WRA+Q AE ++S E++ V+ E+DQ+E GW+
Sbjct: 62 LLGAVVLFVIAYFVINSMRKKDENDGDDFFASLDTEKFNLKLPSEVDEYYKIKEKCESAGWEPGSKPATPQEAANGPHRVMAQALMKRAIADIPILQHIQKESPGMNKLYSQSMCSEKQWRAYQKAEALVSAEVDEVRRESDQIEPGWS 210
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: A0A7S2ULX7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULX7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.070e-19 Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 127 ALLCFGLVAVMVYRLFVKKFVGE-DDFFQDLGISYLDFELPDEIDEYYETKAS--------QQEKEQN-----KELLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
A+L FG+VA M +R +K E D FF +L + LP +DEYYE KA QEK N + +L +AL+KR IADIPI+ +Q E GM +Y Q+M K+WR++Q AE ++S E++ V+ EAD +E GW+
Sbjct: 58 AVLIFGVVAFMRWR--KRKQESEADSFFSELDGEKFNLTLPAAVDEYYEIKAKCEEAGWEPGQEKSGNGAAGPQRVLAQALMKRCIADIPIVTHIQKESAGMNKLYSQSMCSVKQWRSYQAAEAMVSAEVDEVRSEADDIEPGWS 200
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: K0T2G4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T2G4_THAOC) HSP 1 Score: 90.5 bits (223), Expect = 1.600e-18 Identity = 58/172 (33.72%), Postives = 94/172 (54.65%), Query Frame = 1
Query: 49 EEIKTSLPGLADIFDPSVFDMKKLVGALLCFGLVAVMVYRLFVKKF--VGEDDFFQDLGISYLDFELPDEIDEYYETKASQQ-------------EKEQNKELLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
E+ + + +A DP+ + L+ A++ G + +Y L K+ DDFF +L + +LP +DEYYE KA + + + LL +AL+KR IADIPI+ +Q E GM +Y Q+M K+W+++Q AE ++S E+E V+ EAD++E GW+
Sbjct: 32 EDFEEAAEEIAKGIDPAFY----LIFAVIIVG--GLFLYNLLKKRKDNANMDDFFSNLDGDKFNIKLPSAVDEYYEVKAKCESDGWEPGQPMANGQPTNHHRLLAQALMKRCIADIPIVTHIQKESQGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEIEPGWS 197
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: A0A7S1BVB4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVB4_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.140e-18 Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 1
Query: 16 GGASGGSGTFFEEIKTSLPGLADIFDPSVFDMKKLVGALLCFGLVAVMVYRLFVKK-----FVGEDDFFQDLGISYLDFELPDEIDEYYETK----ASQQEKEQNK---------ELLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
GG +G GT EE S P + DP+ + +VG +A ++Y + K+ F D+ F L + ++P+E DEYYE K AS E Q L +AL+KR IAD+P++ MQ E PGM +Y Q+M K+WR+FQ+AE +++ E++ V+ EAD++E GW+
Sbjct: 27 GGGNGTEGT--EEEFGSAPTGPESLDPAYY----VVGIFFALLALAGLIYFMRRKRRRDRGFDDADELFSSLDGKEFNLKVPEEADEYYEVKGECEASGWEPGQGNANASPDGPGRRLAQALMKRCIADVPLLQFMQRESPGMNRLYSQSMCSVKQWRSFQIAEQLVTAEVDEVRAEADEIEPGWS 206
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: B8C1S0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1S0_THAPS) HSP 1 Score: 89.4 bits (220), Expect = 3.280e-18 Identity = 57/156 (36.54%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 91 DPSVFDMKKLVGALLCFGLVAVMVYRLFVKKFVGEDDFFQDLGISYLDFELPDEIDEYYETKASQQEK-------EQNKE------LLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
DP++F L+ A++ F +V +++ + DDFF +L + LP +DEYY+ KA +E+ Q K+ L +AL+KR IADIPI+ +Q E GM +Y Q+M K+W+++Q AE ++S E+E V+ EAD+VE GW+
Sbjct: 56 DPALF----LLLAVVAFAVVFIVLRIRRKRASADVDDFFSNLDGDKFNLRLPAAVDEYYDVKAKAEEEGWEPGQAAQGKQPSAQHRALAQALMKRCIADIPIVTFIQRESAGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEVEPGWS 207
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: A0A7S2S0P4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0P4_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.100e-18 Identity = 66/189 (34.92%), Postives = 95/189 (50.26%), Query Frame = 1
Query: 19 GASGGSGTF-------FEEIKTSLPGLADIFDPSVFDMKKLVGALLCFGLVAVMVYRLFVKKFVGEDDFFQDLGISYLDFELPDEIDEYYETK--------------ASQQEKEQNKE-LLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
GA G GTF FEE+ G DP+++ LV +L L+ +Y KK + FF DL + LP +DEYYE K +QQE +L +AL+KR IADIP++ +Q E GM +Y Q+M K+W+ +Q AE ++S E+E V+ EAD++E GW+
Sbjct: 21 GADSGDGTFAGEEGAAFEEMPMGPKGT----DPAIY----LVLGVLAMVLIWYFLYSRRSKKDDDDFAFFSDLDGEKFNLNLPAAVDEYYEVKDKCEDNGWEPGKPPTNQQEAASGPHRVLAQALMKRCIADIPLVTHIQKESAGMNKLYSQSMCSVKQWKTYQAAEAMVSAEVEEVRAEADEIEPGWS 201
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Match: A0A7S1BU66_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BU66_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.950e-18 Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 1
Query: 16 GGASGGSGTFFEEIKTSLPGLADIFDPSVFDMKKLVGALLCFGLVAVMVYRLFVKK-----FVGEDDFFQDLGISYLDFELPDEIDEYYETK----ASQQEKEQNK---------ELLRRALLKRAIADIPIILRMQAEGPGMYNMYQQAMIGEKEWRAFQLAETVISEEIESVQEEADQVEEGWA 519
GG +G GT EE S P + DP+ + +VG +A ++Y + K+ F D+ F L + ++P+E DEYYE K AS E Q L +AL+KR IAD+P++ MQ E PGM +Y Q+M K+WR+FQ+AE +++ E++ V+ EAD++E GW+
Sbjct: 27 GGGNGTEGT--EEEFGSAPTGPESLDPAYY----VVGIFFALLALAGLIYFMRRKRRRDRGFDDADELFSSLDGKEFNLKVPEEADEYYEVKGECEASGWEPGQGNANASPDGPGRRLAQALMKRCIADVPLLQFMQRESPGMNRLYSQSMCSVKQWRSFQIAEQLVTAEVDEVRAEADEIEPGWS 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7441.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7441.1.1 >prot_P-wetherbeei_contig7441.1.1 ID=prot_P-wetherbeei_contig7441.1.1|Name=mRNA_P-wetherbeei_contig7441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp MGGGGASGGSGTFFEEIKTSLPGLADIFDPSVFDMKKLVGALLCFGLVAVback to top mRNA from alignment at P-wetherbeei_contig7441:1..1373- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7441.1.1 ID=mRNA_P-wetherbeei_contig7441.1.1|Name=mRNA_P-wetherbeei_contig7441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1373bp|location=Sequence derived from alignment at P-wetherbeei_contig7441:1..1373- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7441:1..1373- >mRNA_P-wetherbeei_contig7441.1.1 ID=mRNA_P-wetherbeei_contig7441.1.1|Name=mRNA_P-wetherbeei_contig7441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig7441:1..1373- (Phaeothamnion wetherbeei SAG_119_79)back to top |