mRNA_P-wetherbeei_contig7424.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: D7FJS7_ECTSI (MAP kinase phosphatase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS7_ECTSI) HSP 1 Score: 159 bits (402), Expect = 6.240e-40 Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 1
Query: 1 KRRGRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSLAQPGQVLFYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVIIV 360
++RGRVL+HCVQGVSRSC LAIAW+ML+ G Y++AY VR R +CAPNT F+C LLEWQ+RR+ P L YRTAWHVP FP DL+LK+CI E DRT V ALDSR C++++V
Sbjct: 109 EQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQ--PPSSPLLYRTAWHVPLFPNDLVLKICIHESDRTNVKATLAALDSRGCYLLVV 226
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A6H5L2L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L8_9PHAE) HSP 1 Score: 159 bits (402), Expect = 4.180e-37 Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 1
Query: 1 KRRGRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSLAQPGQVLFYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVIIV 360
++RGRVL+HCVQGVSRSC LAIAW+ML+ G Y++AY VR R +CAPNT F+C LLEWQ+RR+ P L YRTAWHVP FP DL+LK+CI E DRT V ALDSR C++++V
Sbjct: 229 EQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQ--PPSSPLLYRTAWHVPLFPNDLVLKICIHESDRTNVKATLAALDSRGCYLLVV 346
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A835YKW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW6_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.750e-25 Identity = 60/123 (48.78%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 13 RVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSLAQPGQVLFY--------RTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVII 357
RVL+HC QGVSRSCALA AW+M + SY AY VRA R +CAPN F C LLEW++R RTA+H P FPGD +LKLC R P+ P D LD ACFV++
Sbjct: 237 RVLVHCAQGVSRSCALAAAWLMYAHNLSYRDAYASVRAARAICAPNAGFACALLEWERRXXXXXXXXXXXXXXXXXXXXLRTAYHSPLFPGDQVLKLCTDAATRAPLAPRVDLLDPAACFVVV 359
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A7S2V0L7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L7_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.380e-22 Identity = 56/116 (48.28%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 10 GRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSLAQP-GQVLFYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVI 354
GRVL+HCV+GVSRSC + IA+VML G + +AY++VR R VC+PN AF+ LL WQK R QP + YR A H P LL KLC + P VP LD R CF++
Sbjct: 163 GRVLVHCVEGVSRSCTVCIAYVMLHRGVKFPEAYEYVRHARNVCSPNAAFIAALLSWQKMR---VQPVSHPMAYRVAPHGEHDPHTLLPKLCRKHNGLDPAVPTASILDPRTCFLL 275
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A7S2WVL7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVL7_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.770e-21 Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 10 GRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSLAQPGQVLFYRTAWHVPFFPGDLLLKLCIREEDRTPV-VPGPDALDSRACFVIIV 360
G+VL+HCVQGVSRSCAL+IA+ M S SY A+D V+ R +C+PN AF+C L+EW+K+R++ Q FYR A H P L+ KLC R + + VP PD L S FV++V
Sbjct: 294 GKVLVHCVQGVSRSCALSIAYSMWSQKFSYRDAFDFVKRCRPICSPNIAFICNLVEWEKQRKAT----QSYFYRIATHAPHDTHTLVPKLCRRTGEYLSILVPRPDNLCSNGSFVLVV 407
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A4D9AMJ3_SALSN (Atypical dual specificity phosphatase n=6 Tax=Salvia TaxID=21880 RepID=A0A4D9AMJ3_SALSN) HSP 1 Score: 98.6 bits (244), Expect = 1.260e-17 Identity = 57/120 (47.50%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 KRRGRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSL-AQPGQVL-FYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVI 354
++RGRVL+HC QGVSRS +L IA++M G S++ A+ HV+A RGV PN F C LL+ QKR +L A P +L YR A H P+ P L+ KL PG D LDSR F+I
Sbjct: 212 EQRGRVLVHCFQGVSRSASLVIAYLMWKEGQSFDDAFQHVKAARGVTNPNVGFACQLLQCQKRVHALPASPTSLLRMYRMAPHSPYDPLHLVPKLLSE--------PGADKLDSRGAFII 323
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A4D9C1F1_SALSN (Atypical dual specificity phosphatase n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9C1F1_SALSN) HSP 1 Score: 98.6 bits (244), Expect = 1.700e-17 Identity = 57/120 (47.50%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 KRRGRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSL-AQPGQVL-FYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVI 354
++RGRVL+HC QGVSRS +L IA++M G S++ A+ HV+A RGV PN F C LL+ QKR +L A P +L YR A H P+ P L+ KL PG D LDSR F+I
Sbjct: 229 EQRGRVLVHCFQGVSRSASLVIAYLMWKEGQSFDDAFQHVKAARGVTNPNVGFACQLLQCQKRVHALPASPTSLLRMYRMAPHSPYDPLHLVPKLLSE--------PGADKLDSRGAFII 340
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A2P6R123_ROSCH (Uncharacterized protein n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6R123_ROSCH) HSP 1 Score: 97.8 bits (242), Expect = 2.100e-17 Identity = 58/122 (47.54%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 1 KRRGRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSL-AQPGQVL-FYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVIIV 360
K+ GRVL+HC QGVSRS AL IA++M G S+E A+ +V+A RGV PN F C LL+ QKR ++ A P VL YR A H P+ P L+ K+ PGP LDSR FV+ V
Sbjct: 192 KQSGRVLVHCCQGVSRSTALVIAYLMWREGQSFEDAFQYVKAARGVTNPNMGFACQLLQCQKRVHAVPASPSSVLRMYRMAPHSPYDPLHLVPKMLNH--------PGPQGLDSRGAFVVHV 305
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: UPI001C4EDC6D (protein-tyrosine-phosphatase MKP1-like isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4EDC6D) HSP 1 Score: 96.7 bits (239), Expect = 4.720e-17 Identity = 57/117 (48.72%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 10 GRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSL-AQPGQVL-FYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVI 354
GRVL+HC +GVSRS AL IA++M G S+E A+ HV+A RGV PN F C LL+ QKR ++ A P VL YR A H P+ P L+ K+ R PGP +LDSR FV+
Sbjct: 207 GRVLVHCCKGVSRSTALVIAYLMWRDGQSFEDAFQHVKAARGVTNPNMGFACQLLQCQKRVHAVPASPNSVLTMYRMAPHSPYDPLHLVPKMLNR--------PGPLSLDSRGAFVV 315
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Match: A0A6I9TSV7_SESIN (protein-tyrosine-phosphatase MKP1 isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TSV7_SESIN) HSP 1 Score: 96.3 bits (238), Expect = 6.510e-17 Identity = 56/117 (47.86%), Postives = 70/117 (59.83%), Query Frame = 1
Query: 10 GRVLIHCVQGVSRSCALAIAWVMLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSL-AQPGQVL-FYRTAWHVPFFPGDLLLKLCIREEDRTPVVPGPDALDSRACFVI 354
GRVL+HC QGVSRS +L IA++M G S++ A+ HV+A RGV PN F C LL+ QKR +L A P VL YR A H P+ P L+ K+ PG D LDSR F+I
Sbjct: 194 GRVLVHCCQGVSRSTSLVIAYLMWKEGQSFDDAFQHVKAARGVTNPNVGFACQLLQCQKRVHALPASPTSVLRMYRMAPHSPYDPLHLVPKMLCE--------PGADKLDSRGAFII 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7424.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7424.2.1 >prot_P-wetherbeei_contig7424.2.1 ID=prot_P-wetherbeei_contig7424.2.1|Name=mRNA_P-wetherbeei_contig7424.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=573bp MLSAGASYEKAYDHVRARRGVCAPNTAFVCGLLEWQKRRRSLAQPGQVLFback to top mRNA from alignment at P-wetherbeei_contig7424:1007..3016- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7424.2.1 ID=mRNA_P-wetherbeei_contig7424.2.1|Name=mRNA_P-wetherbeei_contig7424.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2010bp|location=Sequence derived from alignment at P-wetherbeei_contig7424:1007..3016- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7424:1007..3016- >mRNA_P-wetherbeei_contig7424.2.1 ID=mRNA_P-wetherbeei_contig7424.2.1|Name=mRNA_P-wetherbeei_contig7424.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1719bp|location=Sequence derived from alignment at P-wetherbeei_contig7424:1007..3016- (Phaeothamnion wetherbeei SAG_119_79)back to top |