mRNA_P-wetherbeei_contig7421.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7421.1.1
Unique NamemRNA_P-wetherbeei_contig7421.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 8.360e-151
Identity = 222/326 (68.10%), Postives = 261/326 (80.06%), Query Frame = 1
Query:  241 AKVQPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQR 1218
            A++QPWVEKYRPKTVDDV+HQ++V  TLK AIATGVLPHLLFYGPPGTGKTST+LA+ARTLFGPD YR RILELNASDERGI VVR+K+KTFAQ++VG  +   GYPCPPFK+IILDEADTMTPDAQ+ALRRTMETYS VTRFCLICNYVTRIIEPLASRCAKFRF AL +  MLDRL  ISREE+V   AD L AIVDLSGGDMRKAVT +QSA Q Y     VT + + ++AG +PA     LW+AI+S ++  + +AVDD M  G+PLS LL  + E  VAD  I DH KA IC R+A+AD+ L+DG +E +QLLD+ ++  R
Sbjct:   25 ARLQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLSYISREEDVKITADGLQAIVDLSGGDMRKAVTAMQSASQFYA-GAEVTPEVLVDIAGKIPAEVKDALWSAIKSGSYHKIVAAVDDFMSSGYPLSTLLEDMQEATVADTTIPDHNKADICRRIAEADRCLIDGCNEELQLLDLASVAAR 349          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A836CA10_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA10_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 1.190e-145
Identity = 225/348 (64.66%), Postives = 279/348 (80.17%), Query Frame = 1
Query:  187 MMEVDEPPTLTAPARHVSAKVQPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPG-YPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGS-VTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQRKL 1224
            MMEVD+  T   PA   +   +PWVEKYRP+TVDD+++Q++VV+TLK AI+TGV+PHLLFYGPPGTGKTSTILAVARTLFGP++YR RILELNASDERGI VVR+KVK FAQ +VG  ++    + CPPFKLIILDEADTMTPDAQAALRRTMETY++VTRFCLICNYVTRIIEPLASRCAKFRFRALS E ML RL  I+  E+V+ +A    A++ L+GGDMRKAVTTLQSAHQLYG  G+ +T +++AE++G V    ++++W A+RS  F TL  AVD  M EG PLS+LL  LLED +AD+ I D  KAAIC+++++AD +L+ GA+E +QLLDV   + R+L
Sbjct:    1 MMEVDDD-TAAKPAVAPAVHTKPWVEKYRPRTVDDIAYQDEVVKTLKKAISTGVMPHLLFYGPPGTGKTSTILAVARTLFGPEMYRTRILELNASDERGIKVVREKVKNFAQAAVGTANATSTTHSCPPFKLIILDEADTMTPDAQAALRRTMETYTKVTRFCLICNYVTRIIEPLASRCAKFRFRALSNETMLTRLDHIAAAEHVSISAAGKQAVIGLAGGDMRKAVTTLQSAHQLYGGSGTEITAEALAEVSGRVSPALVEQIWLAVRSGDFRTLTDAVDAFMFEGSPLSSLLTTLLEDTLADDAIPDVTKAAICKKISEADYSLLLGANEELQLLDVGGFMMREL 347          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A4D9CQY7_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQY7_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 5.120e-140
Identity = 211/333 (63.36%), Postives = 258/333 (77.48%), Query Frame = 1
Query:  220 APARHVSAKVQPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQR 1218
            A A+    KVQPWVEKYRP+ VDD+S+Q++VV+TLKNAI TG LPHLLFYGPPGTGKTSTILAVAR+LFGP+ YR RILELNASDERGI VVR+KVK FAQ +V  +    GYPCPPFK+IILDEADTMT +AQAALRRTMETYS++TRFCL+CNYVTRIIEPLASRCAKFRFR LSRE M  RLR I   E  +   + + AI+ ++ GDMRKAVTTLQSAHQ YG   S+T D+V E++G VP   +Q LW AI + +F  L++  D+    G+P  A+LHRL + VVA+  + D +KA +   LA+A+K ++DGASE +QLLD+ AL+ R
Sbjct:   14 AVAKAQQTKVQPWVEKYRPQGVDDISYQDEVVKTLKNAIQTGTLPHLLFYGPPGTGKTSTILAVARSLFGPE-YRSRILELNASDERGIKVVREKVKQFAQFTVTGLEKTAGYPCPPFKIIILDEADTMTTEAQAALRRTMETYSKITRFCLVCNYVTRIIEPLASRCAKFRFRPLSREVMEARLRAIGTAEGASVTQEMMNAILTVADGDMRKAVTTLQSAHQFYGGSSSITPDAVREMSGGVPDGLVQSLWEAISTQSFDNLKAQCDEVEMAGYPTMAVLHRLFDLVVAEEGVEDAKKAVVMAGLARAEKLIIDGASESLQLLDICALMMR 345          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A7S4DH62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH62_HETAK)

HSP 1 Score: 405 bits (1040), Expect = 3.730e-136
Identity = 216/351 (61.54%), Postives = 263/351 (74.93%), Query Frame = 1
Query:  190 MEVDEPPTLTAPARHVSAKVQPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGP-VSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGS---VTKDSVAELAGTVPAPHMQKLWTAI-RSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQRKLA 1227
            ME++  P     ARH     QPWVEKYRPKTVDD++HQ++VV+TLKNAI TGVLPHLLFYGPPGTGKTSTILAVA+TLFGP+IYR R+LELNASDERGI V+R+KVK FAQ +VG  V    G  CPPFK+++LDEADTMTPDAQAALRRTME +S+VTRFCL+CNYV+RIIEPLASRCAKFRF+ L    M  RLR I  EE V  + + +  IV ++GGDMRKAVTTLQ+AH+L+G  GS   + +D++ ELAG +PA     LW A+     F  +Q   D    EG+P+ ALL RL E+V+A   + D RKAA+ ERLA+AD ALVDGA E +QLLD  A + R++A
Sbjct:    1 MEIEPVPPPQKSARH-----QPWVEKYRPKTVDDIAHQDEVVKTLKNAIDTGVLPHLLFYGPPGTGKTSTILAVAKTLFGPEIYRARVLELNASDERGIKVIREKVKGFAQHAVGRGVVGPNGRRCPPFKIVVLDEADTMTPDAQAALRRTMEVHSKVTRFCLVCNYVSRIIEPLASRCAKFRFQPLQAPAMAARLRQIGAEEGVAFSDETVDTIVAVAGGDMRKAVTTLQTAHRLFGGGGSGKALGRDAILELAGDLPAEATAGLWRAVAEDRVFHRVQEEADALAAEGYPVGALLLRLQEEVLARPGLPDWRKAAVLERLARADAALVDGAGERLQLLDAAATLAREVA 346          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A1Y1HK96_KLENI (Replication factor C subunit RFC4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK96_KLENI)

HSP 1 Score: 382 bits (980), Expect = 3.060e-127
Identity = 188/329 (57.14%), Postives = 251/329 (76.29%), Query Frame = 1
Query:  250 QPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQRKLAEAP 1236
            QPWVEKYRP+ V+DV+ QE+VV+TL+N++ TG LPHLLFYGPPGTGKT+T LA+AR LFGP++ + R+LELNASD+RGI+VVR K+K FA ++VGP  S  GYPCPPFK++ILDEAD+MT DAQ ALRRTMETYS+VTRFC ICNY++RIIEPLASRCAKFRF+ L RE M DR++ I REE ++   +AL  +  +SGGDMR+A+T LQSA +L+G    ++ +++  ++G VP   ++KL T+ RS  +   Q  V D + +G+ +S +L +L ++VV   D+ D +KA ICER+A+ADK L+DG  EY+QLLDV +   R L   P
Sbjct:   10 QPWVEKYRPRNVNDVASQEEVVKTLRNSLETGNLPHLLFYGPPGTGKTTTALAIARQLFGPELVKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVS--GYPCPPFKVLILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYISRIIEPLASRCAKFRFKPLGREIMTDRIQYICREEGLSLDDEALNTLGKVSGGDMRRAITCLQSASRLFG--SRISSENIISVSGVVPDDVIEKLLTSCRSGDYDKAQGTVTDIIADGYAVSQILSQLHDEVVRAEDVTDEQKARICERVAEADKCLIDGGDEYLQLLDVASNTMRALCNMP 334          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A388K568_CHABU (AAA domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K568_CHABU)

HSP 1 Score: 368 bits (944), Expect = 7.660e-122
Identity = 183/332 (55.12%), Postives = 244/332 (73.49%), Query Frame = 1
Query:  241 AKVQPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQRKLAEAP 1236
            A  QPWVEKYRPK+V +V++QE+VVRTLKN + TG LPHLLFYGPPGTGKTST LA+AR LFGP++ + R+LELNASD+RGI+VVR K+K FA ++VG  + +PGYPCPPFKL+ILDEAD+MT DAQ ALRRTMETY++VTRFC ICNY++RIIEPLASRCAKFRF+ L  + M+ R+  I  +E +T   +A+  +  ++ GDMR+A+T+LQSA + YG    + K  +  ++G VP   +  L T  +S  F   Q+AV +   EG+P+S +L ++ +  V   D+ D +KA IC R+A+ADK L+DGA E++QLLDV +   R L   P
Sbjct:    4 ASSQPWVEKYRPKSVSEVAYQEEVVRTLKNTLETGNLPHLLFYGPPGTGKTSTALAIARQLFGPELIKSRVLELNASDDRGINVVRTKIKDFAAIAVG--AGVPGYPCPPFKLLILDEADSMTEDAQNALRRTMETYTKVTRFCFICNYISRIIEPLASRCAKFRFKPLVSDIMVKRISYICDQEGLTLQPEAMDTLCRIADGDMRRAITSLQSASRRYGH--CLMKKDILNVSGVVPDEVVADLLTTCKSGVFDRAQAAVTNVAAEGYPVSQILAQMQDRAVVAQDMTDEQKARICLRIAEADKCLIDGADEFLQLLDVASCTMRALCNMP 331          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A7S3NPK0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPK0_9STRA)

HSP 1 Score: 366 bits (940), Expect = 2.690e-121
Identity = 185/320 (57.81%), Postives = 237/320 (74.06%), Query Frame = 1
Query:  241 AKVQPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDV 1200
            +K   WVEKYRPK+V+DV+ QE+VV++L  AI  G LPHLLFYGPPGTGKTSTILA+ R L+  D++R R+LE+NASDERGI V+R KVK FAQ +VG   +  GYP PPFK+IILDEADTMT DAQ ALRRTMETYS VTRFCL+CNYV+RIIEPLASRCAK+RF  L +E M  RL  I++ ENV    +    I+D S GDMR+AV  LQS    YG +G+++ D++ E++G +P   +  +W+A+ S +FA + + VD  + EG+P  ALL ++ +DV+  + I+DH KA I ERLAQADKAL DGA + +QL DV
Sbjct:    4 SKASMWVEKYRPKSVNDVASQEEVVKSLLGAIEQGALPHLLFYGPPGTGKTSTILAMTRMLYHKDVWRDRVLEMNASDERGIKVIRQKVKAFAQRAVG-TKTYAGYPSPPFKIIILDEADTMTKDAQGALRRTMETYSNVTRFCLVCNYVSRIIEPLASRCAKYRFSPLDKESMRTRLLSIAQAENVNYPNEVYDNILDFSQGDMRRAVNLLQSCVNFYGANGTISPDALLEVSGQIPPQIISNVWSALNSKSFAEVANTVDYVIKEGYPALALLTKIHDDVIHSSSISDHNKAVIIERLAQADKALADGADDSLQLHDV 322          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A2R6XHI2_MARPO (AAA domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XHI2_MARPO)

HSP 1 Score: 366 bits (939), Expect = 5.540e-121
Identity = 182/319 (57.05%), Postives = 240/319 (75.24%), Query Frame = 1
Query:  250 QPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTA 1206
            Q WVEKYRPK V DV++Q++VVRTL N + TG LPHLLFYGPPGTGKTST LA+A  LFGP +Y+ R+LELNASD+RGI+VVR K+K FA ++VG  ++   YPCPPFK+IILDEAD+MT DAQ ALRRTMETYS+VTRFC ICNYV+RIIEPLASRCAK+RF+ L+ E M  R++ + +EE +   ++AL  +  +SGGD+R+A+T LQSA +LYG   S++ D++  ++G VP   +  L  A +S  F   Q  V + + EG P S +L +L + VV  +DI D +KA I ER+A+ DKAL+DGA E++QLLDV++
Sbjct:   12 QQWVEKYRPKQVKDVAYQDEVVRTLTNTLETGNLPHLLFYGPPGTGKTSTALALAHQLFGPVLYKARVLELNASDDRGINVVRTKIKDFAAIAVGNSNAAGDYPCPPFKIIILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKYRFKPLNEEIMTTRIKFVCQEEGIQLNSEALSTLSKVSGGDLRRAITCLQSAARLYG--SSISSDNIISVSGVVPDEILDSLLVACKSGQFDKAQGVVTNIIAEGHPASQILSQLFDIVVKASDITDEQKARILERIAETDKALIDGADEFLQLLDVSS 328          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: A0A6P3ZVL2_ZIZJJ (replication factor C subunit 2 isoform X2 n=4 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZVL2_ZIZJJ)

HSP 1 Score: 365 bits (936), Expect = 1.420e-120
Identity = 180/329 (54.71%), Postives = 242/329 (73.56%), Query Frame = 1
Query:  250 QPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQRKLAEAP 1236
            QPWVEKYRPK V DV+HQE+VVR L N + T   PH+LFYGPPGTGKT+T LA+A  LFGP++Y+ R+LELNASD+RGI+VVR K+K FA ++VG      GYPCPP+K+IILDEAD+MT DAQ ALRRTMETYS+VTRF  ICNY++RIIEPLASRCAKFRF+ LS E M +R+  I  EE +     AL  +  +S GD+R+A+T LQSA +L+G   S++ + +  ++G +P   ++ L++A +   F      V++ + EG+P++ +L +L E +V  +D++D +KA IC++LA+ADKALVDGA EY+QLLDVT+   R L   P
Sbjct:    9 QPWVEKYRPKQVKDVAHQEEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAAIAVGSAQHKGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMSNRILHICNEEGLNLDEQALSTLSSISQGDLRRAITYLQSAARLFG--SSISSEDLIGVSGVIPQEVVEALFSACKGGNFDLANKEVNNIIAEGYPVAQMLSQLFEMIVEADDVSDEQKARICKKLAEADKALVDGADEYLQLLDVTSNTMRALCNMP 335          
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Match: B7FK39_MEDTR (Putative DNA polymerase III, subunit gamma/ tau, P-loop containing nucleoside triphosphate hydrolase n=10 Tax=Fabaceae TaxID=3803 RepID=B7FK39_MEDTR)

HSP 1 Score: 364 bits (934), Expect = 2.660e-120
Identity = 181/329 (55.02%), Postives = 241/329 (73.25%), Query Frame = 1
Query:  250 QPWVEKYRPKTVDDVSHQEDVVRTLKNAIATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGISVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRRTMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLISREENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAELAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDVVADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQRKLAEAP 1236
            QPWVEKYRPK V DV+HQE+VVR L N + TG  PH+LFYGPPGTGKT+T LA+A  LFGP++Y+ R+LELNASD+RGI+VVR K+K FA ++VG      GYPCPP+K+I+LDEAD+MT DAQ ALRRTMETYS+VTRF  ICNY++RIIEPLASRCAKFRF+ L+ E M  R+  I +EE +   A+ L  + ++S GD+R+A+T LQSA +L+G   S++   +  ++G VPA  ++ L  A RS  F      V++ + EG+P+S +L +L E +V +NDI+D +KA I ++L +ADK LVDGA EY+QLLDV +   + L   P
Sbjct:    9 QPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSSRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFG--SSISSKDLISVSGIVPAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTIQALCNMP 335          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7421.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEB4_9PHAE8.360e-15168.10AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CA10_9STRA1.190e-14564.66P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9CQY7_9STRA5.120e-14063.36AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S4DH62_HETAK3.730e-13661.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y1HK96_KLENI3.060e-12757.14Replication factor C subunit RFC4 n=1 Tax=Klebsorm... [more]
A0A388K568_CHABU7.660e-12255.12AAA domain-containing protein n=1 Tax=Chara brauni... [more]
A0A7S3NPK0_9STRA2.690e-12157.81Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A2R6XHI2_MARPO5.540e-12157.05AAA domain-containing protein n=2 Tax=Marchantia p... [more]
A0A6P3ZVL2_ZIZJJ1.420e-12054.71replication factor C subunit 2 isoform X2 n=4 Tax=... [more]
B7FK39_MEDTR2.660e-12055.02Putative DNA polymerase III, subunit gamma/ tau, P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7421contigP-wetherbeei_contig7421:687..2348 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT29
Preferred nameRFC4
PFAMsAAA,Rep_fac_C
Model size1413
Max annot lvl2759|Eukaryota
KEGG koko:K10755,ko:K14015
KEGG Pathwayko03030,ko03420,ko03430,ko04141,map03030,map03420,map03430,map04141
KEGG ModuleM00289,M00295,M00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000076,GO:0000166,GO:0000228,GO:0000278,GO:0000723,GO:0000731,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006281,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006298,GO:0006301,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007093,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010389,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010948,GO:0010972,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019899,GO:0019941,GO:0019985,GO:0022402,GO:0022616,GO:0030163,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031389,GO:0031390,GO:0031391,GO:0031570,GO:0031625,GO:0031974,GO:0031981,GO:0032182,GO:0032200,GO:0032201,GO:0032991,GO:0032993,GO:0033260,GO:0033314,GO:0033554,GO:0033683,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0036094,GO:0042276,GO:0042592,GO:0042623,GO:0042769,GO:0043085,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043599,GO:0043601,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044774,GO:0044786,GO:0044818,GO:0045786,GO:0045930,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051338,GO:0051347,GO:0051603,GO:0051606,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0061860,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070914,GO:0070987,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090618,GO:0097159,GO:0098813,GO:0104004,GO:1900262,GO:1900264,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902296,GO:1902319,GO:1902494,GO:1902749,GO:1902750,GO:1902969,GO:1902983,GO:1903047,GO:1903460,GO:1904949,GO:2000112,GO:2000278,GO:2000573
Exons2
Evalue4.4e-154
EggNOG OGsCOG0470@1|root,KOG0989@2759|Eukaryota
Ec32 ortholog descriptionReplication factor C
Ec32 orthologEc-08_003900.1
DescriptionDNA replication
Cds size1059
COG categoryL
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186980.4220505-UTR-P-wetherbeei_contig7421:686..8541683186980.4220505-UTR-P-wetherbeei_contig7421:686..854Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7421 687..854 -
1683186980.4526067-UTR-P-wetherbeei_contig7421:2162..23481683186980.4526067-UTR-P-wetherbeei_contig7421:2162..2348Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7421 2163..2348 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186980.4337726-CDS-P-wetherbeei_contig7421:854..10851683186980.4337726-CDS-P-wetherbeei_contig7421:854..1085Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7421 855..1085 -
1683186980.443115-CDS-P-wetherbeei_contig7421:1334..21621683186980.443115-CDS-P-wetherbeei_contig7421:1334..2162Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7421 1335..2162 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7421.1.1prot_P-wetherbeei_contig7421.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7421 855..2162 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7421.1.1

>prot_P-wetherbeei_contig7421.1.1 ID=prot_P-wetherbeei_contig7421.1.1|Name=mRNA_P-wetherbeei_contig7421.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=353bp
MMEVDEPPTLTAPARHVSAKVQPWVEKYRPKTVDDVSHQEDVVRTLKNAI
ATGVLPHLLFYGPPGTGKTSTILAVARTLFGPDIYRQRILELNASDERGI
SVVRDKVKTFAQLSVGPVSSMPGYPCPPFKLIILDEADTMTPDAQAALRR
TMETYSRVTRFCLICNYVTRIIEPLASRCAKFRFRALSREPMLDRLRLIS
REENVTAAADALGAIVDLSGGDMRKAVTTLQSAHQLYGPDGSVTKDSVAE
LAGTVPAPHMQKLWTAIRSATFATLQSAVDDEMCEGFPLSALLHRLLEDV
VADNDIADHRKAAICERLAQADKALVDGASEYMQLLDVTALIQRKLAEAP
AS*
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mRNA from alignment at P-wetherbeei_contig7421:687..2348-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7421.1.1 ID=mRNA_P-wetherbeei_contig7421.1.1|Name=mRNA_P-wetherbeei_contig7421.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1662bp|location=Sequence derived from alignment at P-wetherbeei_contig7421:687..2348- (Phaeothamnion wetherbeei SAG_119_79)
GGGGAGGTGAGAGATAAGGGAAACGCCTGCCGACACTTCAAACCTTCATC TCAACCGCTCTAGAACAGCTTGGTGTGCAGTCTGGCTGCCAGGGAAGCTG GACACGAGCACAGCCAAGGCCCCCTTTTCAAATCTTCAAAAGTATCAAAC ACCAACAAAAGCTAGTGCAGCAAGGAACCAAAAATTATGATGGAAGTGGA CGAACCTCCAACTCTGACGGCGCCGGCGCGGCACGTGTCAGCGAAGGTCC AGCCGTGGGTCGAAAAGTATCGCCCAAAGACCGTGGACGACGTCTCGCAC CAAGAAGACGTTGTCCGCACGCTGAAAAACGCCATTGCGACGGGCGTGCT GCCGCACTTGCTCTTTTACGGGCCACCGGGCACTGGAAAGACCAGCACGA TCCTCGCCGTGGCGCGGACACTGTTCGGGCCAGACATTTACCGACAGCGC ATCCTCGAGCTTAACGCGTCGGACGAGCGAGGCATTAGCGTGGTGCGCGA CAAGGTCAAGACCTTCGCACAACTGTCAGTCGGGCCGGTCTCCTCCATGC CCGGCTACCCGTGTCCCCCGTTCAAACTCATAATCCTCGACGAGGCCGAC ACCATGACGCCCGACGCCCAGGCGGCCCTCCGGCGCACCATGGAGACCTA CTCGCGCGTAACGCGCTTCTGCCTTATCTGCAACTACGTCACCCGCATCA TCGAGCCGCTCGCCAGCCGCTGCGCCAAATTCCGCTTCCGCGCGCTCAGC CGCGAGCCTATGCTCGACCGCCTCCGCCTCATCTCACGGGAGGAGAACGT TACCGCCGCCGCCGACGCTCTCGGCGCAATCGTCGACCTATCGGGCGGCG ACATGCGCAAGGCAGTGACGACACTGCAGAGCGCCCACCAGCTATACGGG CCGGACGGCAGTGTCACCAAGGACAGCGTGGCCGAGCTGGCGGGGACGGT GCCGGCGCCGCACATGCAGAAGCTGTGGACCGCAATCCGCTCGGCCACCT TTGCGACACTTCAGGTAAGCAATGATTTCATGTCGCACTCGGGCAGTAAT TCCGTGCTTATAGTCAGACCGTGTTTTCAGACTAACTTCCATAGGGCGGA GCCATGGAACTTCGATGATCGTGTTCCCTTTCCGAGAACAAAACCAAAGC ATCTACATCCACGGCTCTGACTCTCAACTGTTTTTTCCTGTCGCGTTCTC CGCCTGTCAAGCTGGTCCCCGAACCAAACTAACTTAAAAAAACTCTGTAC GACGGCAACGCAGTCGGCGGTGGACGACGAGATGTGCGAAGGCTTCCCGC TGTCGGCGCTGCTGCATCGCCTTCTCGAAGACGTCGTCGCTGACAATGAC ATCGCCGACCACCGCAAGGCTGCCATCTGCGAGCGGCTGGCGCAGGCCGA CAAGGCCCTCGTGGACGGCGCCTCCGAGTACATGCAACTCCTCGACGTCA CCGCCCTCATCCAGCGGAAGCTCGCCGAGGCGCCGGCGTCATGAAGGAGT GCGTCAGGGTTGTGGTATGCGAGGGAAGGCGGAGGAAGTCTTTCTCCAGG AACGGCAATGGCGGCGGGGACGACGGAAGCAGCGGTGCCACGGCGGTACT GGAAGCTTGCGGCGACGGTGTGCCAGAAGGAGTAGAAAAGCATCAATAAA TTGTTACCGACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7421:687..2348-

>mRNA_P-wetherbeei_contig7421.1.1 ID=mRNA_P-wetherbeei_contig7421.1.1|Name=mRNA_P-wetherbeei_contig7421.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1059bp|location=Sequence derived from alignment at P-wetherbeei_contig7421:687..2348- (Phaeothamnion wetherbeei SAG_119_79)
ATGATGGAAGTGGACGAACCTCCAACTCTGACGGCGCCGGCGCGGCACGT
GTCAGCGAAGGTCCAGCCGTGGGTCGAAAAGTATCGCCCAAAGACCGTGG
ACGACGTCTCGCACCAAGAAGACGTTGTCCGCACGCTGAAAAACGCCATT
GCGACGGGCGTGCTGCCGCACTTGCTCTTTTACGGGCCACCGGGCACTGG
AAAGACCAGCACGATCCTCGCCGTGGCGCGGACACTGTTCGGGCCAGACA
TTTACCGACAGCGCATCCTCGAGCTTAACGCGTCGGACGAGCGAGGCATT
AGCGTGGTGCGCGACAAGGTCAAGACCTTCGCACAACTGTCAGTCGGGCC
GGTCTCCTCCATGCCCGGCTACCCGTGTCCCCCGTTCAAACTCATAATCC
TCGACGAGGCCGACACCATGACGCCCGACGCCCAGGCGGCCCTCCGGCGC
ACCATGGAGACCTACTCGCGCGTAACGCGCTTCTGCCTTATCTGCAACTA
CGTCACCCGCATCATCGAGCCGCTCGCCAGCCGCTGCGCCAAATTCCGCT
TCCGCGCGCTCAGCCGCGAGCCTATGCTCGACCGCCTCCGCCTCATCTCA
CGGGAGGAGAACGTTACCGCCGCCGCCGACGCTCTCGGCGCAATCGTCGA
CCTATCGGGCGGCGACATGCGCAAGGCAGTGACGACACTGCAGAGCGCCC
ACCAGCTATACGGGCCGGACGGCAGTGTCACCAAGGACAGCGTGGCCGAG
CTGGCGGGGACGGTGCCGGCGCCGCACATGCAGAAGCTGTGGACCGCAAT
CCGCTCGGCCACCTTTGCGACACTTCAGTCGGCGGTGGACGACGAGATGT
GCGAAGGCTTCCCGCTGTCGGCGCTGCTGCATCGCCTTCTCGAAGACGTC
GTCGCTGACAATGACATCGCCGACCACCGCAAGGCTGCCATCTGCGAGCG
GCTGGCGCAGGCCGACAAGGCCCTCGTGGACGGCGCCTCCGAGTACATGC
AACTCCTCGACGTCACCGCCCTCATCCAGCGGAAGCTCGCCGAGGCGCCG
GCGTCATGA
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