mRNA_P-wetherbeei_contig740.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A812UKF8_9DINO (BHLH140 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UKF8_9DINO) HSP 1 Score: 135 bits (339), Expect = 1.220e-33 Identity = 67/151 (44.37%), Postives = 95/151 (62.91%), Query Frame = 1
Query: 10 LKLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLE 462
L+LLVL G+PGSGKST A+R+ GW VVNQD+ G+R+ C+K R L+ +VVVDRCN + +QR W ++ + G +WLDVP + C RVL+R H TLPP + S+ ++ F++ + P+AEEGF +WR+ S D E
Sbjct: 867 LRLLVLCGLPGSGKSTTAQRLGQGGWVVVNQDSLGSRQACMKTARAALKQQGRVVVDRCNVNAAQRVIWTQLAVQEF---DLQPDQMGCVWLDVPDHECGRRVLQRFGHNTLPPREASLKVIRGFAKKWQAPSAEEGFAHLWRIASDVDAE 1014
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A5J4YL06_PORPP (Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL06_PORPP) HSP 1 Score: 128 bits (322), Expect = 3.980e-33 Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 13 KLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQ-KSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLEAAAAALLD 486
++L++VGIPGSGKST AE + + GW ++QD G R C + R L G+ V+DRCNFD QR PW+++ R S G GA+ L P+ CI RV R HPTLPP S +V F+ F PP ++EG DF V S+ DL+ + + D
Sbjct: 168 RVLIMVGIPGSGKSTMAEMLVARGWKRISQDELGNRYRCEVELIRALLKGQNCVIDRCNFDVDQRRPWIRLAR-------SRGCRVGAIVLATPLEQCIARVRSRESHPTLPPNNPNSEEVVRRFALQFEPPTSDEGIDFARHVRSNTDLDQLCSEMAD 319
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A8J2SED4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SED4_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.600e-33 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 13 KLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTL--PPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLEAAAAAL 480
+L++L G+PGSGKS+ A + GWAVVNQD+ G R C +A R + G +VV+DRCN D +QR W +IL +GG A+WL P++ C+ RVL RP HPTL P +K +V +F ++F PP +E D + ++ +DD +A AAAL
Sbjct: 319 RLVILAGLPGSGKSSLAAALEKRGWAVVNQDSLGNRRKCERACARAFERGDRVVIDRCNHDRAQRAHWTRILER------AGGGYKVAVWLTTPVDSCVERVLARPAHPTLAGPGAEK---VVRNFEKSFDPPGEDE-VDAIIKLAPTDDYDAVAAAL 466
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A6H5KDH3_9PHAE (Smr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH3_9PHAE) HSP 1 Score: 131 bits (329), Expect = 2.690e-32 Identity = 70/156 (44.87%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 13 KLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLEAAAAAL 480
++LVL GIPGSGKST A + GW+VVNQDT G+RE C + ++ L+ G +V++DRCNFD SQR WL + A S A+WLD+P+++C RV R HPTL S IV +++ F PP +EGF V R DL A A L
Sbjct: 36 RILVLAGIPGSGKSTLASFLEDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDL----AVSHSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRYAKDFRPPHRKEGFHTVLRCHGDQDLSEAIALL 187
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A812INR9_9DINO (KIF13B protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812INR9_9DINO) HSP 1 Score: 130 bits (327), Expect = 5.330e-32 Identity = 69/161 (42.86%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 4 RHLKLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLEAAAAALLD 486
R K+L+LVG+PG+GKS A R+++ GW VVNQD G R+ CV A + L R+VVVDRCN QR WL++ A A +WLD+P ++C +RVL+R H TLPP +KS+ ++ +F+R P EG WRV DDL+ A D
Sbjct: 2423 RPFKMLILVGLPGAGKSRLAGRLAALGWEVVNQDHLGDRKACVAAAKEALAKSRRVVVDRCNVTRLQRRVWLEL-------ADDYEVCAACIWLDIPEDVCGDRVLQRFGHETLPPEEKSLEVIAAFARRLEAPMEAEGL-VRWRVKEDDDLDDVLAEYQD 2575
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A812GI21_9DINO (C1QTNF9 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812GI21_9DINO) HSP 1 Score: 127 bits (319), Expect = 6.170e-31 Identity = 68/156 (43.59%), Postives = 97/156 (62.18%), Query Frame = 1
Query: 10 LKLLVLVGIPGSGKSTFAERMSSSG-WAVVNQDTTGTREGCVKAVRRHLQAGR-KVVVDRCNFDPSQREPWLKILRET---APGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLE 462
L+LLVL G+PGSGKS+ A+R+ SG W VVNQD G+R+ C+K R L+ ++V+DRCN + +QR W ++ + PG G +WLDVP + C +RVLRR H TLPP + S+ + F++ + P+AEEGF +WR+ S D E
Sbjct: 881 LRLLVLCGLPGSGKSSLAQRLGLSGNWVVVNQDCLGSRQACMKEARAALRRPNGRIVIDRCNVNVAQRAIWTQLAVQDFDLEPGQM------GCVWLDVPDHECGHRVLRRFAHNTLPPHEASLXXIRGFAKKWQAPSAEEGFAHLWRIASEVDAE 1030
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A813GQ52_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GQ52_POLGL) HSP 1 Score: 124 bits (312), Expect = 5.380e-30 Identity = 66/139 (47.48%), Postives = 91/139 (65.47%), Query Frame = 1
Query: 10 LKLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGR-KVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGF 423
L++LVL G+PGSGKST A R + GW VVNQD+ G+R+ C+KA RR L + ++VVDRCN D SQR W+++ + G S + G +WLDV C RVL+R H TLPP Q S+ ++ SF+ ++ PP + EGF
Sbjct: 1309 LRVLVLCGLPGSGKSTLASRFAEQGWEVVNQDSLGSRQACMKAARRALSRPQGRLVVDRCNADVSQRAIWIQLAMQDF-GLSP--AELGCVWLDVQHEECGLRVLQRFGHSTLPPRQASLKVIKSFASSWQPPTSSEGF 1444
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A813L6L5_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813L6L5_POLGL) HSP 1 Score: 124 bits (311), Expect = 7.300e-30 Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 1
Query: 4 RHLKLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLEAAAAALLD 486
R L++L+LVG+PGSGKS+ + R+S GW VVNQD G R C R+ L AG++VV+DRCN QR WL + E A+ +WLDV C RVLRR H TLP S+ ++ +F+++ P EGF +WR +L+ A A L D
Sbjct: 39 RPLRVLLLVGLPGSGKSSLSARLSRFGWTVVNQDILGDRRACAALARKSLLAGQRVVIDRCNVTRLQRRVWLGVADEHEVAAA-------CIWLDVDEAECGERVLRRFGHATLPAEGSSLEVISAFAQSLETPVEAEGF-VLWRARDDGELDEAVAELRD 191
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A2V3ITA8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITA8_9FLOR) HSP 1 Score: 112 bits (280), Expect = 2.830e-28 Identity = 64/157 (40.76%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 13 KLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLEAAAAALL 483
++LVLVGIPGSGKSTFA+++ GWA ++QD GTR C HL G VV+DRCNFD +QR+ W+ AS+ GS G + + C+ RV R HPTL Q SV ++ + +F P EGF F + S D + LL
Sbjct: 31 RMLVLVGIPGSGKSTFAKQLCELGWARISQDDLGTRRKCEVLTVEHLCTGTNVVIDRCNFDKAQRKRWVDY-------ASARGSACGVIVFATSLQDCLQRVRNRRGHPTLEGDQ-SVGVIKRVAESFEFPDRTEGFAFCRVIRSETDATRVLSELL 179
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Match: A0A835YAU3_9CHLO (FCP1 homology domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAU3_9CHLO) HSP 1 Score: 119 bits (297), Expect = 4.260e-28 Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 16 LLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHLQAGRKVVVDRCNFDPSQREPWLKILRETAPGASSGGSGAGALWLDVPMNICINRVLRRPYHPTLPPTQKSVFIVHSFSRTFVPPAAEEGFDFVWRVTSSDDLEAAAAALL 483
LLVLVGIPGSGKST ++ + GW+ +NQD G+R C A R L+ G VVVDRCN D QR W+++ R+ +G AL L +P+ +C R L R HPTL + ++ F F P EGFD V TSS ++++AAA LL
Sbjct: 4 LLVLVGIPGSGKSTLSQHLVQHGWSHINQDALGSRPACEDACRAALRQGLNVVVDRCNHDSFQRSHWVRLARQ------AGRVRVVALQLLLPVGVCKQRALARVGHPTLG-LHNAEGVIDRFYHEFEPADTREGFDRVMTATSSAEVDSAAAELL 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig740.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig740.2.2 >prot_P-wetherbeei_contig740.2.2 ID=prot_P-wetherbeei_contig740.2.2|Name=mRNA_P-wetherbeei_contig740.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp VRHLKLLVLVGIPGSGKSTFAERMSSSGWAVVNQDTTGTREGCVKAVRRHback to top mRNA from alignment at P-wetherbeei_contig740:6258..6949- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig740.2.2 ID=mRNA_P-wetherbeei_contig740.2.2|Name=mRNA_P-wetherbeei_contig740.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=692bp|location=Sequence derived from alignment at P-wetherbeei_contig740:6258..6949- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig740:6258..6949- >mRNA_P-wetherbeei_contig740.2.2 ID=mRNA_P-wetherbeei_contig740.2.2|Name=mRNA_P-wetherbeei_contig740.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig740:6258..6949- (Phaeothamnion wetherbeei SAG_119_79)back to top |