mRNA_P-wetherbeei_contig74.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig74.4.1
Unique NamemRNA_P-wetherbeei_contig74.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: D7FRX8_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX8_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 8.670e-45
Identity = 105/310 (33.87%), Postives = 157/310 (50.65%), Query Frame = 1
Query:  454 IKNAVYEVADHGPTGMLVHPNFPSTPSIFLQYTADPTNQWQDSCTLPPDADGYSYCNTTQRLHRYDLTVTKSTDGRCINFA---PAGNQV-LVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFS-DYGQRVG---DVCYDSTKELPQGRYRSQRMEFLQGKLLLFKA-ASLLKNAKLVLNT-DYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKAEMTDPSTWPLNFGWPCLEGRIDRSTLTKDDFTWLQKSCRTAA-GEKCDVCDTISPC----INGVDAVNCTKSYRPPAFQY 1338
            IK+ V    DHG     +HP+FP+ P +FL Y+  P   W   C       G  +C     L R  + VT   DG C +++      N+V L+EDWCS++ +H N  +E+Y   ++++ +GD +   F   Y    G   D+CY   ++ PQG +++Q   FLQG L+   A A++  +  L L   DY++ AKGLR P+   ++  TGD+ +GDVG    EEINI+        S+ P N GWPC+EG      +    + W+ +SC        CD+C  I  C    +  VD   C  +Y PP+FQY
Sbjct:   29 IKDDVNAWGDHGLLSSQLHPDFPAEPYLFLFYSVAPEG-WAGECERI--VKGLPFCEQNAVLERLKIDVTVDDDGMCSDWSFSDSENNRVRLMEDWCSSAGAHHNAAMEFYTDGSLLVANGDSSQAPFDRGYPAEDGTPVDLCYLDDEKQPQGYFKAQNEAFLQGHLIRIHAEATMYDSEDLPLTELDYDVWAKGLRNPFRLDIDRQTGDIYLGDVGDSTAEEINILRNPLDAAASSLPANLGWPCVEG----GGIPLPTYNWITQSCDVNDDNNNCDICKAIFACTAEALGDVDL--CDPAYVPPSFQY 329          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A0G4IYG1_PLABS (PKD domain-containing protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYG1_PLABS)

HSP 1 Score: 173 bits (438), Expect = 3.840e-43
Identity = 119/323 (36.84%), Postives = 159/323 (49.23%), Query Frame = 1
Query:  307 ASSVALTPTGTRRMEVRFSPCSN----------HVFVIDKSGNF-IAESTVADELTFKFTIKNA---VYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-------PTNQWQDSCTLPPDADGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQRVGDVCYDSTKELPQGRYRSQRMEFLQGKLLLFKAASLLKNAKLVL-NTDYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKA-EMTDPSTWPLNFGWPCLEGRIDRSTLTKDDF 1206
            A++V + PT  R+ EV +S  S+           VF+ +K G   +  S  ADE  F +         Y   D G  G+ V  N+P  P +++ Y+ +       P     D  T P  AD +SYC T   L R  + V +              QVLV DWCS S SH  G++ W     + LT+GDGA   F D G    D CY+      QG +RSQ ME+LQGKLL F   SL+ +  L L N D+ I+AKGLR PY  TV+P+TGD+ +GDVGS  WEEIN V    +  +    P NFGWPC EG         +++
Sbjct:   26 ATAVVIDPTKLRQ-EVHWSGASSVVAIDFAKDGSVFLTEKDGRIRLYPSIEADENDFVYVFDQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP--ADRHSYCGTAAHLVRVRVDVPRRKG--------TIEQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHMEYLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMP-NFGWPCYEGNYPYVVFAPNNY 335          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A3P3Y1N1_PLABS (PKD domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y1N1_PLABS)

HSP 1 Score: 173 bits (438), Expect = 4.220e-43
Identity = 119/323 (36.84%), Postives = 159/323 (49.23%), Query Frame = 1
Query:  307 ASSVALTPTGTRRMEVRFSPCSN----------HVFVIDKSGNF-IAESTVADELTFKFTIKNA---VYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-------PTNQWQDSCTLPPDADGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQRVGDVCYDSTKELPQGRYRSQRMEFLQGKLLLFKAASLLKNAKLVL-NTDYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKA-EMTDPSTWPLNFGWPCLEGRIDRSTLTKDDF 1206
            A++V + PT  R+ EV +S  S+           VF+ +K G   +  S  ADE  F +         Y   D G  G+ V  N+P  P +++ Y+ +       P     D  T P  AD +SYC T   L R  + V +              QVLV DWCS S SH  G++ W     + LT+GDGA   F D G    D CY+      QG +RSQ ME+LQGKLL F   SL+ +  L L N D+ I+AKGLR PY  TV+P+TGD+ +GDVGS  WEEIN V    +  +    P NFGWPC EG         +++
Sbjct:   26 ATAVVIDPTKLRQ-EVHWSGASSVVAIDFAKDGSVFLTEKDGRIRLYPSIEADENDFVYVFDQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP--ADRHSYCGTAAHLVRVRVDVPRRKG--------TIEQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHMEYLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMP-NFGWPCYEGNYPYVVFAPNNY 335          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A4D9D6I0_9STRA (GSDH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I0_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.780e-39
Identity = 102/272 (37.50%), Postives = 140/272 (51.47%), Query Frame = 1
Query:  454 IKNAVYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-PTNQWQDSC---------TLPPDADGYSYCNTTQRLHRY----DLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQRVGDVCYDSTKELPQGRYRSQRMEFLQGKLLLFKAASLLKNAKLVLNTDYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTK---AEMTDPSTWPLNFGWPCLEGRIDRSTLTKDDFTWLQ 1218
            IK+ VY   DHG      HP FP  P +++ Y+++ P N WQD C         T PPD     YC T  +L R     DLT  K             +Q L +DWCS++ +H  G I W +  +MI  +GDG+     D+GQ   D C D      QG + +Q+  +L+GK L    A++LKN  L    DY+ ++KG R P+  TV+P TGD+ IGDVGS +WEEIN +     A+   P     NFGWPC+EG    S + +   TWL+
Sbjct:   81 IKDQVYSWWDHGLLSASFHPQFPQQPYLYIAYSSESPGNPWQDQCVPDPKKVAMTNPPDTR--PYCKTMAKLVRLKVDPDLTSAKF------------DQELFQDWCSSTYTHHVGTINWLEDGSMIYGAGDGSHFQGLDHGQPQ-DECTDPKGPKDQGVFTAQKDAYLRGKFLHISPAAVLKNGYLQGGQDYSQISKGSRNPFRTTVDPKTGDIYIGDVGSSVWEEINRIPNPLSADYRKP-----NFGWPCVEGVDAVSDIYQ---TWLR 329          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A4D9D361_9STRA (GSDH domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D361_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.600e-39
Identity = 99/293 (33.79%), Postives = 149/293 (50.85%), Query Frame = 1
Query:  346 MEVRFSPCSNHVFVIDKSGNFIAESTV---ADELTFKFTIKNAVYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-PTNQWQDSCT-------LPPDADGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQRVGDVCYDSTKELPQGRYRSQRMEFLQGKLLLFKAASLLKNAKLVLNTDYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKAEMTDPSTWPLNFGWPCLEGRIDRSTL 1191
            ++V F P    V  + K G      ++   + + T    I   VY   DHG     VHP+FP  P +F+ Y+A+ P   W D+C        +   AD   YC T  ++ R  LTV +  D     F    +  L  DWC+++ +H  G + + +  +MI  +GDG+     D+GQ   D C D      QG + SQ+  +L+GK ++ K  SLLK+  L  N DY ++++G R P+ +T++P TGDV  GDVGS +WEEIN +      D   + +NFGWPC+EG    S +
Sbjct:   53 VQVVFLP-GGKVMTVHKPGELHVYDSIFSKSQDYTTILDINEEVYSWWDHGLLSAAVHPDFPQKPYLFIAYSAEYPGKPWNDNCEVDYRLSHMTTPADTRPYCKTMAKIIR--LTVDE--DFTTATF----DAELFHDWCTSTYTHHVGTMNFLEDGSMIYGAGDGSHFQGIDHGQPQ-DECTDPQGPKDQGVFLSQKDGYLRGKFIVIKPESLLKDEHLQANVDYTVISRGARNPFRSTIDPMTGDVFFGDVGSSVWEEINHIPNPLDLD---YVMNFGWPCIEGENSVSDI 332          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A7W0SFM7_9ACTN (PQQ-dependent sugar dehydrogenase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0SFM7_9ACTN)

HSP 1 Score: 122 bits (306), Expect = 4.100e-26
Identity = 100/299 (33.44%), Postives = 133/299 (44.48%), Query Frame = 1
Query:  352 VRFSPCSNHVFVIDKSGNFIAESTVADEL-TFKFTIKNAVYEVADHGPTGMLVHPNFPSTPSIFLQYTADPTNQWQDSCTLPPDA--DGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQRVGDVCYDSTKELP-------QGRYRSQRMEFLQGKLLLFKAASLLKNAKLVL-----------NTDYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKAEMTDPSTWPLNFGWPCLEGRIDRS 1185
            VRFSP    VFV +K G      ++ D   T    +   VY   D G  GM +HPNFP+TP I+L YT D T+ + D+C  PP A  DG   C    +L +  +    +T G  +        ++   WC    SH+ G +E+     + ++ GDGA  +  DYGQ  G +    T + P        G  RSQ      G  L F    L  N                ++D  I+A GLR P+   V P  GDV +GDVG   WEEIN +       PS    NFGWPC EG   +S
Sbjct:   68 VRFSP-DGRVFVAEKGGTVKVFDSLTDPTPTTAVDLSTEVYAYWDRGLLGMALHPNFPTTPYIYLLYTLD-THPYNDACPTPPGANTDG---CMANGKLVKVQVN-PDNTSGSPV-------ALITGMWCQQFPSHSIGTVEFGPEGALYVSGGDGASFTVVDYGQLGGTLSGTPTPQNPCGDPVNEGGALRSQDSR-TSGDPLSFHGTVLRINPDTGAAWAGNPLAGGDSSDDAILANGLRNPFRMAVAP-DGDVFVGDVGWNTWEEINKI-------PSGAFRNFGWPCYEGSAPQS 344          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A538DBQ8_9ACTN (PKD domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DBQ8_9ACTN)

HSP 1 Score: 121 bits (303), Expect = 1.170e-25
Identity = 98/312 (31.41%), Postives = 140/312 (44.87%), Query Frame = 1
Query:  352 VRFSPCSNHVFVIDKSGNFIAESTVADEL-TFKFTIKNAVYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-------PTNQWQDSCTLPPD--ADGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQRVG--------DVCYD---------STKELPQGRYRSQRMEFLQGKLLLFKAASL---------LKNAKLVLNTDYN---IVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKAEMTDPSTWPLNFGWPCLEG 1170
            VRF+     +F+ +KSG       ++D   T    +K  V    D G  G+ + PNFP++P I++ Y  D       PT  W D+C  PP    DG   C    RL R  L+   +T            QVL++ WC    SH+ G++ +    ++ +++G+GA     DYG+  G        + C D         S      G  RSQ      G+ ++   A L         + +  L  ++D N   IVA GLR P+  T+ P T  V +GDVG   WEE+N V      DP+T PLNFGWPC EG
Sbjct:   77 VRFAS-DGRIFIAEKSGLIKEFDNLSDTTPTIVADLKTEVDNYWDRGLLGLALDPNFPTSPYIYVLYAYDAPPGGTAPT--WNDACPTPPGPTTDG---CVVQGRLARLTLSGNTATS----------EQVLIQGWCQQYPSHSIGDLHFGTDGSLFVSAGEGANFGIVDYGESGGGSGSPTPANPCGDPPSPVGTALSPPNAEGGALRSQSPRRAAGEPVVLNGAILRVDPATGAGVASNPLSSSSDANARRIVAYGLRNPFRFTLRPGTNAVWLGDVGWNDWEEVNRVP-----DPTTGPLNFGWPCYEG 367          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A8J4A6R5_9ACTN (PKD domain-containing protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4A6R5_9ACTN)

HSP 1 Score: 117 bits (293), Expect = 2.240e-24
Identity = 107/324 (33.02%), Postives = 138/324 (42.59%), Query Frame = 1
Query:  307 ASSVALTPTGTRRMEVRFSPCSN----------HVFVIDKSGNFIAESTVADELTFKFTIKNA-VYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-PTNQ----WQDSCTLPPDADGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQRVGDV----CYDSTKELPQGRYRSQRMEF------LQGKLLLFK-----AASLLKNAKLVLNTDYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKAEMTDPSTWPLNFGWPCLEGRIDRS 1185
            AS+VAL P+G +  ++ FS  S+           VFV +K G       +AD     F   +A V+   D G  GM++ PNFP+ P +++ YT D P  Q    W D C    D      C  T RL R        T            QVL+ DWC    SH+ G+I +     + + +GDGA  +  DYGQ         C D   E   G  RSQ +        L G LL        AA    N+         IVA GLR PY  T+ P T +  I D G   WEE+N V      DP+T   NFGWPC EG   +S
Sbjct:   27 ASAVAL-PSGFQE-QIVFSGLSSPVDLEFAADGRVFVAEKGGRIKVFDDLADTTPTVFADLSANVHNQWDRGLLGMVLAPNFPTNPYVYVLYTYDAPPGQVAPVWNDVCANANDGR----CVVTGRLSRLQANGNTMT---------GTEQVLLHDWCQQFPSHSIGDIAFGADGMLYVAAGDGASFNAVDYGQLPSGAPTNPCGDPANE--GGALRSQDLRTPGDETQLDGTLLRLDPATGAAAPGNPNSASADPDTRRIVAHGLRNPYRITMRPGTNETWISDTGWNTWEEVNRVP-----DPTTGVTNFGWPCWEGNARQS 328          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A7W7WR06_9ACTN (Glucose/arabinose dehydrogenase n=1 Tax=Micromonospora polyrhachis TaxID=1282883 RepID=A0A7W7WR06_9ACTN)

HSP 1 Score: 115 bits (289), Expect = 6.550e-24
Identity = 103/357 (28.85%), Postives = 156/357 (43.70%), Query Frame = 1
Query:  337 TRRMEVRFSPCSNHVFVIDKSGNFIAESTVADELTFKFT-IKNAVYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-------PTNQWQDSCTLPPDADGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQR-------------VGDVCYDSTKELPQGRYRSQRMEF------LQGKLLLFK--AASLLKNAKLVLNTDYN---IVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKAEMTDPSTWPL-NFGWPCLEGRIDRS-------------------TLTKDDFTWLQKSCRTAAGEKC 1251
            TR  ++ FSP    +FV  K+G       ++D     F  +++ VY+  D G  G+ + P+FP+ P +++ Y+ D       PT  + D+C           C  + R+ R         DG   N      QVL+ DWC    SH+ G++ +     + +T GDGA  +F+DYGQ              +G      T E   G  RSQ +        L G L+       + L +     + D N   IVA GLR PY     P T +V +GDVG ++WEEIN      +TDP+  P+ N+GWPC EG + ++                   T+T   +T+   S + AAG+ C
Sbjct:   40 TRPTKLVFSP-DGRIFVGQKNGIIKVFDGLSDTTATVFADLRSNVYDFEDLGLIGLALAPDFPADPWVYVSYSYDGMIGGSAPT--YNDACAA------IGSCPASSRVSRL------RADG---NVMTGTEQVLLHDWCQQIESHSIGDLAFGPDGALYVTGGDGASGTFTDYGQAGNPTNPCGDPPAPIGGAMTPPTAE--GGALRSQDVRTPADPTGLSGTLIRINPTTGAALPDNPWASSADANTRRIVAYGLRNPYRWAFRPGTSEVWLGDVGWRVWEEIN-----RITDPAGGPVRNYGWPCYEGNVRQNGYRAAGLELCSSLYTAPAGTVTPPHYTYAH-SQQVAAGDGC 370          
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Match: A0A1H3RCP1_9ACTN (Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=137265 RepID=A0A1H3RCP1_9ACTN)

HSP 1 Score: 113 bits (283), Expect = 4.300e-23
Identity = 94/302 (31.13%), Postives = 135/302 (44.70%), Query Frame = 1
Query:  358 FSPCSNHVFVIDKSGNFIAESTVADELTFKFT-IKNAVYEVADHGPTGMLVHPNFPSTPSIFLQYTAD-------PTNQWQDSCTLPPDADGYSYCNTTQRLHRYDLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILTSGDGAMPSFSDYGQR--VGDVCYD------STKELPQ---GRYRSQRMEF------LQGKLLLFKAAS--LLKNAKLVLNTDYN---IVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEINIVTKAEMTDPSTWPL-NFGWPCLEG 1170
            F+P    + +  K+G      +++D     F  + + V+   D G   M V P+FP +P +++ YT D       PT  + D C +  D      C  + R+ R  +           N      QVL+ DWC    +HA GN+ +     + ++ GDGA PSF DYGQR  V + C D       T   P    G  RSQ +        L G  +    A+   L +  +  ++D N   I+A GLR PY     P T +V  GDVG +LWEEI+      + DP   P+ NFGWPC EG
Sbjct:   56 FAP-DGRILIAQKNGVIKIYDSLSDTTPTVFADLSSEVFTYGDLGLLSMAVPPDFPDSPYVYVSYTYDGPIGGSAPT--YNDQCAVLGD------CVVSNRVSRLRIAG---------NVMTGSEQVLLHDWCHVYETHAVGNVGFGPDGALYVSGGDGASPSFPDYGQRGAVTNPCGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPATGAALPDNPMAGSSDPNTRRILAYGLRNPYRWVFRPGTSEVWFGDVGWRLWEEID-----RLPDPLNGPVENFGWPCYEG 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig74.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRX8_ECTSI8.670e-4533.87GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A0G4IYG1_PLABS3.840e-4336.84PKD domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A3P3Y1N1_PLABS4.220e-4336.84PKD domain-containing protein n=1 Tax=Plasmodiopho... [more]
A0A4D9D6I0_9STRA2.780e-3937.50GSDH domain-containing protein n=2 Tax=Monodopsida... [more]
A0A4D9D361_9STRA3.600e-3933.79GSDH domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7W0SFM7_9ACTN4.100e-2633.44PQQ-dependent sugar dehydrogenase n=1 Tax=Acidimic... [more]
A0A538DBQ8_9ACTN1.170e-2531.41PKD domain-containing protein n=1 Tax=Actinomyceti... [more]
A0A8J4A6R5_9ACTN2.240e-2433.02PKD domain-containing protein n=1 Tax=Virgisporang... [more]
A0A7W7WR06_9ACTN6.550e-2428.85Glucose/arabinose dehydrogenase n=1 Tax=Micromonos... [more]
A0A1H3RCP1_9ACTN4.300e-2331.13Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig74contigP-wetherbeei_contig74:1839..6289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121272.KB903291_gene3433
PFAMsBig_5,CarboxypepD_reg,F5_F8_type_C,GSDH,PA14,PKD
Model size1352
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorysignal peptide
Exons9
Evalue2.12e-29
EggNOG OGsCOG2133@1|root,COG3291@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,2GJFY@201174|Actinobacteria,4DASA@85008|Micromonosporales
DescriptionRepeats in polycystic kidney disease 1 (PKD1) and other proteins
Cds size1152
COG categoryG
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig74.4.1prot_P-wetherbeei_contig74.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig74 2037..6289 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186978.5120146-UTR-P-wetherbeei_contig74:1838..20361683186978.5120146-UTR-P-wetherbeei_contig74:1838..2036Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig74 1839..2036 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186978.524793-CDS-P-wetherbeei_contig74:2036..22611683186978.524793-CDS-P-wetherbeei_contig74:2036..2261Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 2037..2261 +
1683186978.5356612-CDS-P-wetherbeei_contig74:2757..28211683186978.5356612-CDS-P-wetherbeei_contig74:2757..2821Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 2758..2821 +
1683186978.5461233-CDS-P-wetherbeei_contig74:3212..32911683186978.5461233-CDS-P-wetherbeei_contig74:3212..3291Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 3213..3291 +
1683186978.5569248-CDS-P-wetherbeei_contig74:3507..36921683186978.5569248-CDS-P-wetherbeei_contig74:3507..3692Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 3508..3692 +
1683186978.5674715-CDS-P-wetherbeei_contig74:4032..40971683186978.5674715-CDS-P-wetherbeei_contig74:4032..4097Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 4033..4097 +
1683186978.5853145-CDS-P-wetherbeei_contig74:4336..44561683186978.5853145-CDS-P-wetherbeei_contig74:4336..4456Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 4337..4456 +
1683186978.5991306-CDS-P-wetherbeei_contig74:4924..50881683186978.5991306-CDS-P-wetherbeei_contig74:4924..5088Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 4925..5088 +
1683186978.607567-CDS-P-wetherbeei_contig74:5570..56761683186978.607567-CDS-P-wetherbeei_contig74:5570..5676Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 5571..5676 +
1683186978.6158473-CDS-P-wetherbeei_contig74:6145..62891683186978.6158473-CDS-P-wetherbeei_contig74:6145..6289Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig74 6146..6289 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig74.4.1

>prot_P-wetherbeei_contig74.4.1 ID=prot_P-wetherbeei_contig74.4.1|Name=mRNA_P-wetherbeei_contig74.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=384bp
MFIRRAFLPAFALGHQALLLWRGGAASPNILNDVFTASSVALTPTGTRRM
EVRFSPCSNHVFVIDKSGNFIAESTVADELTFKFTIKNAVYEVADHGPTG
MLVHPNFPSTPSIFLQYTADPTNQWQDSCTLPPDADGYSYCNTTQRLHRY
DLTVTKSTDGRCINFAPAGNQVLVEDWCSTSSSHANGNIEWYDGANMILT
SGDGAMPSFSDYGQRVGDVCYDSTKELPQGRYRSQRMEFLQGKLLLFKAA
SLLKNAKLVLNTDYNIVAKGLRQPYVNTVNPWTGDVLIGDVGSKLWEEIN
IVTKAEMTDPSTWPLNFGWPCLEGRIDRSTLTKDDFTWLQKSCRTAAGEK
CDVCDTISPCINGVDAVNCTKSYRPPAFQYRGSI
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mRNA from alignment at P-wetherbeei_contig74:1839..6289+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig74.4.1 ID=mRNA_P-wetherbeei_contig74.4.1|Name=mRNA_P-wetherbeei_contig74.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4451bp|location=Sequence derived from alignment at P-wetherbeei_contig74:1839..6289+ (Phaeothamnion wetherbeei SAG_119_79)
GATAAATCCTAACTCTAAACCCTAGAAACTCAGAATGCACGATGTCCGAA TGATATTTTATCCCCTCTAGACTCAATCTAGCTGCGTGCCGCAAGGAGCA GCCAACCAGCCCTCTCTGTGGAGCGGCGAAGCCACTGTGTCGTTCTGTTT TTCGTCCCGCCCCTCTTCCGTCAGTCGTGTGCGTTCTGGCGTACGACTAT GTTCATCAGGCGCGCCTTCCTTCCAGCTTTCGCGTTGGGCCACCAAGCTC TTCTTCTTTGGCGTGGCGGTGCCGCGAGTCCGAACATTCTTAACGATGTC TTTACGGCGAGCTCCGTGGCACTGACTCCTACGGGTACAAGAAGGATGGA AGTTCGCTTCTCCCCATGCTCAAACCACGTTTTCGTCATCGACAAAAGCG GAAACTTCATCGCCGAGTCCACTGTGAGCGAGTTCACCGTTCCCCTGGCA CTCTATTCCCGGCCGGCCAGCAGTCTTATCACTGTTGAGCCTGTGTTTGC CCTGACAATTGACCACCTTGGCTCGCCCCTCAGAGCTGTATGATGTTTCC ATCAAAGGGGAAGAAGCTGGGCTTTGTGAGGTTTTTGTTCGTGCCGTCGT CAGAAGAAGGTAGCGCTCGACATATCCTCTTTCCATGTTCCAGACTCCTT CTTGTTTAGACTTCGGCTGGCAGCCGGCAGCTTTCTTCTCCGTTTCAGCC TGCCTTTCTTCTGGGTTCGCAGTCCACGCAAAGACCTGGCATCATTGCGT GCGGCATAGGTTATCTAGTAGCCTTATGTACAAGCTAGCCTACGCACCAG CGTCTCGGGGCGACCTCTACTAGCCATTTATGACCACAGGGAATCGAAAA AGGCATCATTCTTTTCCTCGCTCCTGCCTGCTTCTTCTCAATGTCTTCTT CCTCTTTTTCTTCTCTCAGGTAGCAGATGAGCTGACCTTCAAGTTCACCA TCAAGAATGCAGTCTATGAGGTTGCGGACCACGGTGCGTTCGGGCCTAGT CATGGGATGAATTGCCGGTTTCTTTCAAGATTCGTGGCGGCATGGCCCAA CAGGCACTCCGGGCGCCGGCGCCGCCGCCGCCGCTGCGGTAGCGCCCGCC GCCGTCACTACCAGGACCCGCGTTACTTCCCTGGTGCCGTTGCCGCCGAC GGACGGCCACGGCCACTGCCGCCGCCTACTCCTCCGGAAACGCCGCTGCC ACCGGCCGCTGCCCGTGGTCCGGCATCCCACCACATCCTCGACTTTATCG GCTGTCATCACTCTCCCCGCCACTATTCCCGCCGCTGCCACCGTCATCGC CGCCGTTGCCGCCGCCGCTGCCGCCTGCCATTCAACCGCCGCTGCCGCTC GTTGCTCTCTGTCGCACGTGCCAGGCCCCACAGGCATGCTGGTCCACCCG AATTTCCCGTCGACGCCATCTATCTTTCTTCAGTACACCGCAGACCCCAC CAAGTAAGTCCCGTTTATCCCTGAGCCCGGAACTGTGAGGAATGGTATAC GGCTGTGGCAGCTGCAACACAGAGGAGGGGCAGAAAATCCAAGGCACGGA GAGCAGCGAGGTTTGCTTTCTTTGAGATCGGTAGAAACTGTCGCATCGAG CAGCCTTTTCTCTCAGTCCTTTCGGCTGTCGCGCCTTCCGCCGCTCGCCG CCGCGCCGCGGCGCCGCAGCCAGTGGCAAGACTCGTGCACGCTGCCGCCG GACGCCGACGGGTACAGCTACTGCAACACGACGCAACGGCTGCACCGTTA TGACCTCACCGTAACAAAGTCAACCGACGGCCGCTGCATAAACTTCGCGC CCGCGGGGAATCAGGTCCTGGTGGAGGACTGGTGCTCGACATCGTCGTCC CACGGTGAATCTCGTGTGCCAGTTACGGCGGTTTTGACAGCTTTCGCCCG GTTTTAGTGGATCCGGAACACTAGGGCCAAGCGGAACCTGGCAAATTTCG ACAGTCACCGGGCAGACCGGTTTCCGGCGGTCTTTGACAGTTGCGCTTGC AGTCCGCTGTGTGTGATATCGCCGTGCCGGCAGCGTGTCGCAAATCTGAA GTGCGGGGCCGGTAAGCAAGAACGGCAACTTACTACGTTAGTGAAAAATG ACCGACTTGTAATTCTCTGTCCGTTCTTCCTTTTGGACGTTGCCCGCCCC GCACTCACTGCGTCGCGCTCCGTGCGCCCGAGCGACCAAATCAGCCAACG GCAACATTGAGTGGTACGACGGCGCCAACATGATTCTGACGTCCGGCGAC GGAGCCATGGTTAGTGAGCGCGGATGGTCAAATAACTAATTTTGGTTGGT GGCTCTGCTAGGAGGAACTTGTTTCTTTTCAAGTCTATGCATGCGATGAC TGGTATAGGGGCGATGACCCGCTCCCTTTCGTCTCTCTTTAACCCTTATC CTAGCCCTAAAACCGGCCGACCGCTTTCCCTTTTCGATCCCTTGATCGGC CCGCAACAGCCATAACCCTAAGTTCCTGTGACCGCCGAAAACAAACAGCC GTCATTCAGCGACTACGGGCAGCGCGTCGGCGACGTCTGCTACGACTCGA CCAAGGAACTGCCGCAGGGCCGCTACCGCTCGCAGCGCATGGAGTTTCTC CAGGGCAAGCTGCTTCTGGTGAATCGTCTTCTCTGCTTGGCGGTTTGGAT CGCTGAGCGGATCTTCTTCGTTGGTGTTTTGAAGGACATCTAACTTCCTT TTGTACGCTGGCGGTCAGCGGGTGCTGGATCTGTTCGGGACAAGCTTCTT GTCATGGGTCCATTTTTCTTCTCTTCAGCTTTCTACAATCCATTTTGGCA CAGCCGATGCTCTCGCCGGCCGGCATCCATTTTGGCACCGCCGAAGCGGC CGGCATCGTACTCATCCCGAATTCCTGCTTCCGACGGCTGACTGATCTGG TGAAGGTAGCTCAAAGCACAATTTTATTTTGGGCTGCCGTGAATGCGTCG AGGGCTCCTGTATCCTCACTTCACAATTTCATGTATGCTTAGCCGCACCA TTCCCGTCGTTGCCGCCGCGCTGCCGCCGCCGTCCCTCTAACTCGGCTGC CGCTGCCGCCGGCGGCTACCATATCAAGGGCGGCAGTTCAAAGCGGCGTC GCTTCTCAAAAACGCCAAGCTCGTCCTGAACACGGATTATAATATCGTCG CGAAAGGCCTCCGGCAGCCGTACGTCAACACGGTGAACCCGTGGACGGGC GACGTGCTCATCGGCGACGTCGGCAGCAAGCTCTGGGAGGAAATCAACAT GTAAGCAGATAAGGTTTTTCGAGGACAGTTTACTTTCGGAACTCTCACCA GTTGTCGCGGTTCTTCCCGGCAGCTCCTCCTTGTTCCAGGACCCCAGGGG CAAGATGGAGACATCGTCTTTCTCCTATCTGAATTCCGCTGAATATTCCT TTTCTGGGCCGCCAAGCAACCTGTAGTCTTGCTGACCGATACGTCGCGCC CTTGCGCCTTCCAAAGTTCTGAACTCTGAAACTCCAGCCGCGGATCGTTG TCGGCACTCTCTGCTTTCGCCAGAACGGAAGCCATGGTTGGACTTGCCTC CTTCGGGCCCGTATTTGGCTCCTTCCGGCCAGCTCTCGCTACGCCCGCCA CGCAACCACGCCGCGATCGTGCCGTTCTTTGCGACACTTCCCCATTTCCT TTTCGTGGCCACGCGCCCGTTCTTCCGGTTCCCGGTTTATTCCTTCCTCC GGCTGCGGTGACTGTGGCGGCGGCCGGTGCAGTGTGACCAAGGCGGAGAT GACGGACCCTTCCACATGGCCGCTCAACTTCGGCTGGCCGTGCCTCGAGG GCCGCATTGACAGGAGCACCCTGACCAAGGACGACTTTGTGAGAAACCAC CGTCCTGGCGACAGCAAATAGTTTTGGCGGCATTCGTCGGGCTGCGGAAA AACTCTCTCCGACTCTTGCCGTCTCGACGGAATTTGGCCCCTTACTTCCT TCTTTGTTGCGTCGTGGCAACCAGTGGCTGTCCACCAAACCAGCGTTGGC GACTGAATCTGCTGCCACTGCTGCCTTTCGCCACCTTCGCCGGGGACTGC CGCCGCCGCTCGCTCCCTCTCACTCTGTTTGCCACTGCCGACCGCCGTTG CGGGCTACTCGCTGCTCACGACTGCGCCATCTGCTGCCCGCCGCGACCGC TGCCAAATCTCGCTGTCTGCAACCGCGCTACCTGTTGCGCTGCCACCGCC GCCACCTTCCGCTCTGTTGCCGCCGCCAATACTGCTTTTGCCGCCACTGC CGCTACCGTTGTTCGCTGCCCTCGCCACCGCCGCCGCCATCGCTGCCGCA ACTGTAGACCTGGCTCCAAAAATCGTGCAGAACGGCCGCCGGCGAGAAGT GCGACGTCTGTGACACGATCTCTCCGTGCATCAACGGTGTCGATGCGGTA AACTGCACCAAGAGCTACCGGCCGCCGGCGTTCCAGTACCGCGGCTCGAT C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig74:1839..6289+

>mRNA_P-wetherbeei_contig74.4.1 ID=mRNA_P-wetherbeei_contig74.4.1|Name=mRNA_P-wetherbeei_contig74.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig74:1839..6289+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCATCAGGCGCGCCTTCCTTCCAGCTTTCGCGTTGGGCCACCAAGC
TCTTCTTCTTTGGCGTGGCGGTGCCGCGAGTCCGAACATTCTTAACGATG
TCTTTACGGCGAGCTCCGTGGCACTGACTCCTACGGGTACAAGAAGGATG
GAAGTTCGCTTCTCCCCATGCTCAAACCACGTTTTCGTCATCGACAAAAG
CGGAAACTTCATCGCCGAGTCCACTGTAGCAGATGAGCTGACCTTCAAGT
TCACCATCAAGAATGCAGTCTATGAGGTTGCGGACCACGGCCCCACAGGC
ATGCTGGTCCACCCGAATTTCCCGTCGACGCCATCTATCTTTCTTCAGTA
CACCGCAGACCCCACCAACCAGTGGCAAGACTCGTGCACGCTGCCGCCGG
ACGCCGACGGGTACAGCTACTGCAACACGACGCAACGGCTGCACCGTTAT
GACCTCACCGTAACAAAGTCAACCGACGGCCGCTGCATAAACTTCGCGCC
CGCGGGGAATCAGGTCCTGGTGGAGGACTGGTGCTCGACATCGTCGTCCC
ACGCCAACGGCAACATTGAGTGGTACGACGGCGCCAACATGATTCTGACG
TCCGGCGACGGAGCCATGCCGTCATTCAGCGACTACGGGCAGCGCGTCGG
CGACGTCTGCTACGACTCGACCAAGGAACTGCCGCAGGGCCGCTACCGCT
CGCAGCGCATGGAGTTTCTCCAGGGCAAGCTGCTTCTGTTCAAAGCGGCG
TCGCTTCTCAAAAACGCCAAGCTCGTCCTGAACACGGATTATAATATCGT
CGCGAAAGGCCTCCGGCAGCCGTACGTCAACACGGTGAACCCGTGGACGG
GCGACGTGCTCATCGGCGACGTCGGCAGCAAGCTCTGGGAGGAAATCAAC
ATTGTGACCAAGGCGGAGATGACGGACCCTTCCACATGGCCGCTCAACTT
CGGCTGGCCGTGCCTCGAGGGCCGCATTGACAGGAGCACCCTGACCAAGG
ACGACTTTACCTGGCTCCAAAAATCGTGCAGAACGGCCGCCGGCGAGAAG
TGCGACGTCTGTGACACGATCTCTCCGTGCATCAACGGTGTCGATGCGGT
AAACTGCACCAAGAGCTACCGGCCGCCGGCGTTCCAGTACCGCGGCTCGA
TC
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