mRNA_P-wetherbeei_contig7397.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A6H5JLK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK7_9PHAE) HSP 1 Score: 162 bits (410), Expect = 7.890e-43 Identity = 118/282 (41.84%), Postives = 146/282 (51.77%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEANGVNGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FH VPY+ R+ AC L+V S +TVG+G + VQL GV +SLQ+GLGE+SFLAL++ YD+ ALT WSSGTGFAG+F XXXXXXXX S RATL+ A +L L++L YF LL PR ++ NG +G G GGA + A+V MT G+R + +SLW + PL+LVY AEYTMQTG WSAIGFPVSS AR F+E ANW YQ
Sbjct: 114 FHLVPYSARVWACTMLLVLSLVTVGYGESTRVQLLGVCFSSLQAGLGESSFLALASFYDTPRALTAWSSGTGFAGIFGXXXXXXXXXXXXXSFRATLMMANLLGLVFLYAYFKLLSAPRSGTLRNGSSSLQTRRGNRAAAPDTYSPIPSSQRSPPPSPSL-----NGPSGGGGAELFSSNIEHGSREEDGGWGLGEGRGGGALDV-----ELVPTASVRAPEMTVGQRLCFTISLWRFTVPLMLVYFAEYTMQTGTWSAIGFPVSSIAARERFYEYANWCYQ 385
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: D7FPF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF2_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.050e-36 Identity = 111/267 (41.57%), Postives = 135/267 (50.56%), Query Frame = 1
Query: 46 LMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEANGVNGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
L+V S +TVG+G + VQL GV +SLQ+GLGE+SFLAL++ YD+ ALT WSSGTGFAG+F XXXXXXXX S RATL+ A +L L++L YF LL PR ++ NG +G G G GG E V A MT G+R + +SLW + PL+LVY AEYTMQTG WSAIGFPVSS AR F+E ANW YQ
Sbjct: 2 LLVLSLVTVGYGGSTRVQLLGVCFSSLQAGLGESSFLALASFYDTPRALTAWSSGTGFAGIFGXXXXXXXXXXXXXSFRATLMMANLLGLVFLYAYFKLLSAPRSGTLRNGSSSLQTRGGNRAAAPGTYSPIPSSQRSPSPSPSL-----NGPSG-GRGAELFSSNSEQGGRDEDGGWGLGEGRGGGALDVELVPTGSVRA----PEMTVGQRMCFTISLWRFTVPLMLVYFAEYTMQTGTWSAIGFPVSSMAARERFYEYANWCYQ 258
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A8J9RH41_9CHLO (Protein BTN1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RH41_9CHLO) HSP 1 Score: 141 bits (356), Expect = 2.130e-35 Identity = 103/283 (36.40%), Postives = 132/283 (46.64%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEANGVNGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTA-MTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FH+ Y RM A LM ++ TV F + +QL GV ++LQ GLGEAS LA+ +DSRAA+T WSSGTGFAGV G++ R TLL A + WLL YF LL +P+ A + +E N ++ S D G S S+ H QGV A A T M ER + LWPYM PL LVY AEY MQ+G W+AIGFP + AR++F+E++NW YQ
Sbjct: 52 FHYTSYNVRMWLIAILMGCAYTTVAFSSRRALQLLGVVFSALQGGLGEASCLAMCTFFDSRAAITFWSSGTGFAGVAGYTWVGLLHILLGFTFRTTLLIANATAVGWLLVYFMLL-QPQTCAKRRIEGVVSLEARSSSEQ-------------------LQALEQNALSSEIPQHDDSSCLTERRPAESLLLLPSRSLDSGPASPSK--HSQGVLAPQATTQRMDWRERYHRTVDLWPYMVPLTLVYFAEYAMQSGTWTAIGFPTDNATARHQFYEVSNWCYQ 312
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A5J4XD34_9CHLO (Golgi integral membrane protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XD34_9CHLO) HSP 1 Score: 131 bits (329), Expect = 2.340e-31 Identity = 105/323 (32.51%), Postives = 131/323 (40.56%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEA----------------------------------NGVNGHGXXXXXXXXXXXXXXXXXXXXXXXG-------SCDGGATSTSEKAHDQGVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FH + Y RM A +M S+LTV +G + QL GV + Q GLGEAS LAL +LYDSR ALT WSSGTGFAGV G++ R TLL A V + WL Y +L P + A A++ G+EA NG NG G S DG A ++S + + M GER + LWPY+ PLV VY AEY MQTG W+AIGFPV+ AR+ F+ +NW YQ
Sbjct: 58 FHLISYDVRMTVVAVMMTGSYLTVAYGRHMSWQLLGVTFAAFQGGLGEASTLALCSLYDSRRALTLWSSGTGFAGVAGYTWVAVLHLWLGFTFRTTLLLANVTSVAWLFIYHKVLPPPNLEAISQLHTLTSRSESTSDLPQGTTASAADRLAAD---ASLLGLEAESKGRLSRRQKDAADSLASRRETAGSHNSPAWQPNGANGMTRRASWLDLDHAASSEQPSNAALLGDEERGRMSTDGDAATSSRQQRPED---------MAWGERLVQTVKLWPYLVPLVAVYFAEYAMQTGTWTAIGFPVTDPAARHRFYAASNWCYQ 368
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: W7TQX4_9STRA (Cln3like protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX4_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.320e-31 Identity = 126/304 (41.45%), Postives = 145/304 (47.70%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------AAVAGVEANGVN-------------GHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FHHV Y+ R C FLM AS LTV G T+ VQL GVG SLQ+G+GEAS L L+A Y + +T WSSGTGFAG+ S ATL+AA +LP+ W+ +F LG+P A AA A + N ++ GXXXXXXXXXXXXXXXXXXXXXXX V T ER LSLWPY PLV VY AEY MQ+GAWSAIGFPV E AR F+ AN SYQ
Sbjct: 75 FHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--------FTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQ 370
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A2P6TP97_CHLSO (Batten s disease Cln3 isoform B n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TP97_CHLSO) HSP 1 Score: 130 bits (327), Expect = 4.890e-31 Identity = 126/303 (41.58%), Postives = 146/303 (48.18%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEANGV----NGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTAMTAGE-----------------RARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FH V Y RM A A LM AS+ TV ++ G QL GV + SLQSGLGEAS LAL++ Y RAA+T WSSGTGFAGVF + AG S ATLL A WL Y LL P A XXXXXXXXXXXX A V G XXXXXXXX GA+S ++A + GE R + ++LWPYM PL LVY AEY MQ+G W+AIGFPV+SE AR+ F+ ANW YQ
Sbjct: 66 FHLVRYRTRMQAVALLMTASYTTVALSSSRGWQLLGVVLASLQSGLGEASCLALTSHYRGRAAITMWSSGTGFAGVFGYAWVLLLHFLAGLSFTATLLLANATCAAWLAVYHLLLEAPEERAAQLWRHDSADWAGAAAASEGSLGXXXXXXXXXXXXXXXXXGGAPQVPLLAEAAGRDAVGEPDSSRAQEGXXXXXXXXXXXXXGASSDPQQAXXXXXXXXXXXXQLELGEGSEEWRPSKAGRMTWRERLQRTVALWPYMVPLFLVYFAEYAMQSGTWTAIGFPVTSEMARHRFYFYANWKYQ 368
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A8K1CMG1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMG1_PYTOL) HSP 1 Score: 126 bits (317), Expect = 5.070e-30 Identity = 94/285 (32.98%), Postives = 131/285 (45.96%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGA-TVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVE--ANGVNGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FH Y HR A M+ SF+ V +G ++G+QL GV + LQSG+ EASFLA+++ YD++ LTCWSSGTG AGV G S TL+ A + P+L++ + +L R+P A+ G + ++G+ G+ S D GV A A++ E+ R+V +L PYM PLV+VY AEYTMQTG WS IGFPV+S +AR F+ A +YQ
Sbjct: 70 FHLFSYRHRTYVAALWMLMSFIVVAYGTHSLGLQLLGVAFSGLQSGMMEASFLAMASFYDAQRCLTCWSSGTGLAGVGGYAWVAIFHLWLGLSFSTTLVLASIFPVLYVFIFTAVLDTTRLPVPRRATNQY---------------------------TAIPGATDVESPLDGNSSYSRN-----------------------GSQSLRSPGADSGVVMGAA--ALSFSEKLRFVKTLGPYMIPLVVVYFAEYTMQTGVWSTIGFPVTSAEARATFYSSAGMAYQ 302
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A2D4CGQ9_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGQ9_PYTIN) HSP 1 Score: 126 bits (316), Expect = 6.190e-30 Identity = 96/283 (33.92%), Postives = 126/283 (44.52%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGA-TVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEANGVNGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FH + Y HR A M+ SFL V FG ++ QL GV + LQSG+ EASFLAL++ Y SR LTCWSSGTG AGV G S ATLL A + PLL+++ + +L +P+ AG +A+ +T + H V A+T E+ R+ L+L PY+ PL +VY AEYTMQTG WS IGFPV+S DAR+ F+ A +YQ
Sbjct: 74 FHLISYRHRTYIGALWMLLSFLVVAFGTHSLAWQLLGVAFSGLQSGMMEASFLALASFYQSRHCLTCWSSGTGLAGVGGYAWVAIFHLWLGLSFSATLLLACIFPLLYVIMFDVVLDTAHLPSPRQVTGEYTVIPDRPED---------------------AGADAD-------------------------------------ATRNQYHQP-----VGAAALTFKEKLRFTLTLGPYIIPLTVVYFAEYTMQTGVWSTIGFPVTSADARSAFYASAGMAYQ 293
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A5D6XYD2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYD2_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.280e-29 Identity = 104/285 (36.49%), Postives = 129/285 (45.26%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGA-TVGVQLAGVGMTSLQSGLGEASFLALSALYDSRAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATL-LAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEANGVNGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQGVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFP-VSSEDARNEFFELANWSYQ 846
FH V Y R L A M+ SFL V GA ++ +QL GV + LQSG+ EASFLA+++LYDS+ LTCW+SGTG AGV G S ATL LAA V P L++L + LL R+ AV G S +G + +E H A A MT E+AR+ L+L PYM PLV+VY AEYTMQTG WS IGFP +S AR EF+ A +YQ
Sbjct: 66 FHLVSYRSRTLLGALWMLLSFLVVAGGAHSLALQLLGVAFSGLQSGMMEASFLAMASLYDSQRCLTCWASGTGLAGVGGYAWVALLHLRLGLSFAATLQLAALVFPALYVLTFAVLLDTSRLSPATQCAPFYYAAIPESAEFGGAEHPVGSPMAVASRTTAVTGTGKT----------------------------RDSLEG-SDRDAEPPHRTDDDALDAAARMTVREKARFTLTLGPYMVPLVVVYLAEYTMQTGVWSTIGFPEATSARARAEFYSAAGLAYQ 321
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Match: A0A087SQQ0_AUXPR (Protein btn-1 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQQ0_AUXPR) HSP 1 Score: 123 bits (308), Expect = 1.790e-28 Identity = 130/296 (43.92%), Postives = 152/296 (51.35%), Query Frame = 1
Query: 1 FHHVPYAHRMLACAFLMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDS-RAALTCWSSGTGFAGVFXXXXXXXXXYSAGWSLRATLLAAQVLPLLWLLCYFCLLGEPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAGVEANGVNGHGXXXXXXXXXXXXXXXXXXXXXXXGSCDGGATSTSEKAHDQ-------------GVAAAVAVTAMTAGERARYVLSLWPYMGPLVLVYAAEYTMQTGAWSAIGFPVSSEDARNEFFELANWSYQ 846
FH V Y RM A A LM SF V A+ +QL GV + S Q GLGEAS LALSA Y S R +T WSSGTGFAGV AG S R TLLA VL WL +F LL R P XXXXXXXXXXXXXXXXXXX AA G+ +G XXXXXXX GG T+ + ++ G AA++ +A+ R L LWP+ PL VY AEY+MQ+GAW+AIGFPV+ AR+ F+ ANW YQ
Sbjct: 66 FHAVGYPPRMAAAAALMSGSFCLVALSASRPLQLLGVALASFQGGLGEASCLALSARYGSDRGPITLWSSGTGFAGVAGYAWVAALHVWAGLSFRTTLLAGNVLAGAWLATFFLLL---RPPXXXXXXXXXXXXXXXXXXXXSAGPAPIDPERVPLRPAAAGGLLPR--SGSRSALAVEAGGSHAATGRXXXXXXXXXXXGGRTAAALSIQERRPAGAGRGGETGPGAAASLPPSALGPLGRLCLTLGLWPFTVPLFTVYLAEYSMQSGAWTAIGFPVTDAAARHAFYIYANWCYQ 356 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7397.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7397.1.1 >prot_P-wetherbeei_contig7397.1.1 ID=prot_P-wetherbeei_contig7397.1.1|Name=mRNA_P-wetherbeei_contig7397.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=273bp MLACAFLMVASFLTVGFGATVGVQLAGVGMTSLQSGLGEASFLALSALYDback to top mRNA from alignment at P-wetherbeei_contig7397:1550..3018- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7397.1.1 ID=mRNA_P-wetherbeei_contig7397.1.1|Name=mRNA_P-wetherbeei_contig7397.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1469bp|location=Sequence derived from alignment at P-wetherbeei_contig7397:1550..3018- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7397:1550..3018- >mRNA_P-wetherbeei_contig7397.1.1 ID=mRNA_P-wetherbeei_contig7397.1.1|Name=mRNA_P-wetherbeei_contig7397.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig7397:1550..3018- (Phaeothamnion wetherbeei SAG_119_79)back to top |