mRNA_P-wetherbeei_contig7380.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: D7G400_ECTSI (CCT-eta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G400_ECTSI) HSP 1 Score: 210 bits (535), Expect = 2.230e-62 Identity = 118/160 (73.75%), Postives = 130/160 (81.25%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAPSQGVGLGRGGGGGPVSAAMGGGGMAGMMGA-GRGGRRGVKMMRGRGGA 477
KTI+GKQQL+MS+ A+ALEIIPRQLADNAGFDATDLLNRLRQKH R + AGKWFGVDVD EG+CDTF GVWEP +NKRN LRSA EAAC+ILSIDETV++PQSEK GAPSQGVGLGRGG P+SA MG GRG R GVKMM+GRGGA
Sbjct: 426 KTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGD--AGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG---PISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A836CEV1_9STRA (T-complex protein 1 subunit eta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV1_9STRA) HSP 1 Score: 204 bits (519), Expect = 5.120e-60 Identity = 111/160 (69.38%), Postives = 131/160 (81.88%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAPSQGVGLGRGGGGGPVSAAMGGGGMAGMMGAGRGGR-RGVKMMRGRGGA 477
+ I GK+QLVM AVA+ALEI+PRQL++NAG D+TD+LNRLR H + + G+W GV VDEE +CDT A+GVWEP +NKRN LRSA EAAC+ILSIDETVR+PQSE+PGAPSQGVGLGRGG P+SA MGG GMAGMMGAGRG RGV+ M+GR GA
Sbjct: 426 RAISGKEQLVMGAVAKALEIVPRQLSENAGLDSTDVLNRLRHAHAQPGD--GGRWIGVSVDEEDVCDTMAKGVWEPTINKRNALRSAIEAACLILSIDETVRNPQSEQPGAPSQGVGLGRGGQ--PISAGMGGMGMAGMMGAGRGKLPRGVRAMKGRAGA 581
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A6H5JXK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK9_9PHAE) HSP 1 Score: 200 bits (508), Expect = 7.180e-60 Identity = 115/160 (71.88%), Postives = 127/160 (79.38%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAPSQGVGLGRGGGGGPVSAAMGGGGMAGMMGA-GRGGRRGVKMMRGRGGA 477
KTI+GKQQL+MS+ A+ALEIIPRQLADNAGFDATDLLNRLRQKH R + AGKWFGVDVD EG+CDTF GVWEP +NKRN LRSA EAAC+ILSIDETV++PQ GAPSQGVGLGRGG P+SA MG GRG R GVKMM+GRGGA
Sbjct: 271 KTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGD--AGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ----GAPSQGVGLGRGG---PISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 421
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A7S1U8Z7_9STRA (CCT-eta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Z7_9STRA) HSP 1 Score: 188 bits (478), Expect = 9.330e-54 Identity = 109/167 (65.27%), Postives = 130/167 (77.84%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAP-SQGVGLGRGGGGG------PVSAAMGGGGMAGMMGAGR-GGRRGVKMMRGRGGA 477
++I+GK+QL+M+ +ARALE+IPRQL+DNAGFDAT++LN+LR KH + AGKW+GVDVD EGI DTF GVWEPA NK N +A EAAC+ILSIDETVR+P+SE+PGA + GVGLG G GG PVSAAMGGGGMAGMM R GG RGV+ RGRGGA
Sbjct: 456 RSIEGKEQLIMNGMARALEVIPRQLSDNAGFDATEVLNQLRMKHAKGT---AGKWYGVDVDVEGITDTFESGVWEPAANKMNSFAAASEAACVILSIDETVRNPRSEQPGAADANGVGLGAGAGGRGGRRGKPVSAAMGGGGMAGMMXXXRRGGPRGVRAFRGRGGA 619
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A7S2V255_9STRA (T-complex protein 1 subunit eta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V255_9STRA) HSP 1 Score: 186 bits (471), Expect = 5.410e-53 Identity = 106/164 (64.63%), Postives = 124/164 (75.61%), Query Frame = 1
Query: 4 TIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAP-SQGVGLGRGGGGGPVSAAMGGGGMAGMMGAGRG-GRRG----VKMMRGRGGA 477
TIQGKQQLV +A A+ALE++P QLA NAGFD+TDLLN+LRQ H + AGKW GVDV+ EGI DTF G+WEP +NKRN L +A EAAC++LS+DETVR+P+S+ PGAP SQGVGL PVSA MGG GMAGM+ GRG GRRG VK RGRGGA
Sbjct: 427 TIQGKQQLVFTAFAKALEVVPYQLASNAGFDSTDLLNKLRQAHAKS---SAGKWMGVDVETEGITDTFEAGIWEPTINKRNALMAAAEAACLVLSVDETVRNPRSQAPGAPDSQGVGLA------PVSAGMGGQGMAGMVSRGRGRGRRGMPRGVKAFRGRGGA 581
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A482S2P7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2P7_9ARCH) HSP 1 Score: 169 bits (429), Expect = 6.210e-51 Identity = 97/164 (59.15%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAPSQGVGLGRG------GGGGPVSAAMGGGGMAGMMGAGRGGRRGVKMMRGRGG 474
+TIQGK QLV+ A ARALE++P+ +ADNAG D+ D+LN+LR++H + + +G +W GVDV EGICDT GVWEPA NK N L +A EAAC+ILSIDETVR+PQSEKPGAPSQGVGL G VS AMGG GM+GMM G +GV +GRGG
Sbjct: 19 RTIQGKMQLVVQAFARALEVVPKNVADNAGIDSIDVLNKLRKEHAQNKPEG--RWIGVDVLNEGICDTLQAGVWEPAANKSNALAAASEAACLILSIDETVRNPQSEKPGAPSQGVGLXXXXXXXXRGTRKMVSEAMGGKGMSGMM-----GTKGVNSFKGRGG 175
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A7S3YMJ2_HETAK (T-complex protein 1 subunit eta (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YMJ2_HETAK) HSP 1 Score: 173 bits (439), Expect = 4.690e-49 Identity = 87/127 (68.50%), Postives = 102/127 (80.31%), Query Frame = 1
Query: 13 GKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAPSQGVGLGRGGGGGPVSAAM 393
GK+Q ++ A A ALE+IP QLA NAGFD+TDLLNRLRQ+H +D AG+WFG+DV EEGI DTF G+WEP +NKRN L +A EAAC++LSIDETVR+PQSEKPGAPSQGVGLG G PVSA M
Sbjct: 363 GKEQPIVEAFADALEVIPHQLAVNAGFDSTDLLNRLRQRHA---QDRAGRWFGIDVQEEGIFDTFEAGIWEPTINKRNALEAATEAACLLLSIDETVRNPQSEKPGAPSQGVGLGSG----PVSAGM 482
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A7S3HGG0_9STRA (T-complex protein 1 subunit eta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGG0_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.090e-46 Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAPSQGV 348
+TI GKQQL+M+A ARA E+IPRQLA+NAG D+TD+LNRLR++H + D G+WFGVDV EGICDT GVWEPA NK N L +A EAAC ILSIDETVR+PQSEKPGA SQGV
Sbjct: 177 RTILGKQQLIMNAYARAFEVIPRQLAENAGIDSTDVLNRLRKEHATAKGD-EGRWFGVDVLNEGICDTLESGVWEPAANKLNSLAAATEAACCILSIDETVRNPQSEKPGAASQGV 291
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A662XPU8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPU8_9STRA) HSP 1 Score: 164 bits (414), Expect = 6.370e-46 Identity = 95/163 (58.28%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAPSQGVGLGRGGGGGPVSAAMGGGGMAGMMGAGRGGR----RGVKMMRGRGGA 477
+TI+GK QL+++A A+A EIIPRQ+A+NAG DATD+LNRLRQKH + E+G KWFGVD+ GICDT+ VWEPA NK N + +A EAAC+ILS+DETVR+P+SE+P QG GGGG P+SAAMGG GM GMM RGV+ RG+GGA
Sbjct: 265 RTIEGKAQLLVNAYAKAFEIIPRQIAENAGHDATDILNRLRQKHFKDPEEG--KWFGVDISSGGICDTYESHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQP---QQG-----GGGGAPMSAAMGGQGMRGMMXXXXXXXXXMGRGVRAFRGKGGA 417
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Match: A0A7R9UFR0_9STRA (CCT-eta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR0_9STRA) HSP 1 Score: 164 bits (416), Expect = 5.150e-45 Identity = 98/167 (58.68%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 1 KTIQGKQQLVMSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVDEEGICDTFARGVWEPAMNKRNCLRSACEAACMILSIDETVRHPQSEKPGAP-SQGVGLGRGGGGGPVSAAMGG------GGMAGMMGAGRGGR-RGVKMMRGRGGA 477
+ I+GK+QL+M+++ARALE+IPRQLADNAGFDAT++LN LR KH + E+ G+W+GV+VD EGI DTF VWEPA NK N +A EAAC+ILSIDETVR+P++E+PGA + GVGLG GGGG MGG GGM M G GR G +GV+ +GRGGA
Sbjct: 426 RKIEGKEQLIMNSMARALEVIPRQLADNAGFDATEVLNNLRMKHAKDEK---GRWYGVNVDVEGITDTFQSNVWEPAPNKVNSFAAASEAACLILSIDETVRNPRTEQPGAADANGVGLGPGGGG------MGGRRGKAPGGMPPMGGGGRRGMPKGVRAFKGRGGA 583 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7380.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7380.1.1 >prot_P-wetherbeei_contig7380.1.1 ID=prot_P-wetherbeei_contig7380.1.1|Name=mRNA_P-wetherbeei_contig7380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp MSAVARALEIIPRQLADNAGFDATDLLNRLRQKHHRKEEDGAGKWFGVDVback to top mRNA from alignment at P-wetherbeei_contig7380:31..815+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7380.1.1 ID=mRNA_P-wetherbeei_contig7380.1.1|Name=mRNA_P-wetherbeei_contig7380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=785bp|location=Sequence derived from alignment at P-wetherbeei_contig7380:31..815+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7380:31..815+ >mRNA_P-wetherbeei_contig7380.1.1 ID=mRNA_P-wetherbeei_contig7380.1.1|Name=mRNA_P-wetherbeei_contig7380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig7380:31..815+ (Phaeothamnion wetherbeei SAG_119_79)back to top |