mRNA_P-wetherbeei_contig7369.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A3C0TRC9_9PROT (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRC9_9PROT) HSP 1 Score: 321 bits (822), Expect = 1.360e-110 Identity = 148/172 (86.05%), Postives = 164/172 (95.35%), Query Frame = 1
Query: 1 VTAGHAEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQKGDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
+TAG+AEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDIS++PAG AITVTWRGKPVFIRHR+A+EI+AA V + +L DPQ+D+ RVQKPEWLIMVGVCTHLGCVPLGQKGDFGGWFCPCHGSHYDTSGR+RKGPAP NLA+PEYVFLD+N++KIG
Sbjct: 1 MTAGNAEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISSVPAGGAITVTWRGKPVFIRHRTAEEIAAAENVEMGDLIDPQSDSDRVQKPEWLIMVGVCTHLGCVPLGQKGDFGGWFCPCHGSHYDTSGRIRKGPAPQNLAVPEYVFLDENKIKIG 172
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A351T9B8_9PROT (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T9B8_9PROT) HSP 1 Score: 293 bits (749), Expect = 1.830e-99 Identity = 132/168 (78.57%), Postives = 150/168 (89.29%), Query Frame = 1
Query: 13 HAEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQKGDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
HAEEPTRRDFLYIATGAVGAVGA ALAWPFIDQLNPDASV ALASIEVD+S I G A+TVTWRGKPVFIRHR+A EI AA V+I ELRDPQTD RVQ+ EWL+M+G+CTHLGCVPLG+KG++ GWFCPCHGSHYDTSGR+RKGPAPLNL +P+Y F+ ++R+KIG
Sbjct: 5 HAEEPTRRDFLYIATGAVGAVGAAALAWPFIDQLNPDASVLALASIEVDLSTIDEGGAVTVTWRGKPVFIRHRTAAEIEAAKAVDISELRDPQTDEERVQRAEWLVMMGICTHLGCVPLGEKGEYDGWFCPCHGSHYDTSGRIRKGPAPLNLEVPQYAFIGEDRIKIG 172
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A366FPB8_9HYPH (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Roseiarcus fermentans TaxID=1473586 RepID=A0A366FPB8_9HYPH) HSP 1 Score: 266 bits (679), Expect = 8.770e-89 Identity = 117/166 (70.48%), Postives = 140/166 (84.34%), Query Frame = 1
Query: 19 EEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQKGDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
+ P RRDFLY+ATGAVGAVG A+AWPFIDQ+NPDAS A+AS EVDI+A+P G +T+ WRG PVF+RHR+ +EI A V + ELRDPQTDA+RVQKPEWLI+VG+CTHLGCVP+G +G + GWFCPCHGS YDTSGR+R+GPAPLNLA+PEY FL D R+KIG
Sbjct: 8 QAPNRRDFLYLATGAVGAVGVAAVAWPFIDQMNPDASTLAMASTEVDIAAVPEGQILTIKWRGGPVFVRHRTKKEIEDAQNVELSELRDPQTDASRVQKPEWLIVVGICTHLGCVPIGHEGKYEGWFCPCHGSVYDTSGRIRQGPAPLNLAVPEYKFLTDTRLKIG 173
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A2A5EWH9_9HYPH (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EWH9_9HYPH) HSP 1 Score: 266 bits (679), Expect = 1.000e-88 Identity = 120/171 (70.18%), Postives = 140/171 (81.87%), Query Frame = 1
Query: 19 EEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQ-----KGDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
+EPTRRDFLY+ATGA A+G + WP IDQ+NPDAS ALASIEVDIS + G +ITV WRGKPVFIRHR+A+EI A EVN+ +LRDPQ+D RV KPEWL+MVG+CTHLGCVP GQ KGD+ GWFCPCHGSHYDTSGRVRKGPAPLNL +PEY F+ D+++KIG
Sbjct: 7 DEPTRRDFLYVATGAFAAIGVAGITWPLIDQMNPDASALALASIEVDISNVEVGQSITVKWRGKPVFIRHRTAKEIGEAEEVNVLDLRDPQSDQQRVIKPEWLVMVGICTHLGCVPKGQQVSDEKGDYDGWFCPCHGSHYDTSGRVRKGPAPLNLEVPEYTFVTDDKIKIG 177
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A3A0EUA8_9PROT (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0EUA8_9PROT) HSP 1 Score: 265 bits (677), Expect = 1.770e-88 Identity = 124/171 (72.51%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 4 TAGHAEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQKGDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
T A+ TRRDFLY+A GA AVGA A AWP IDQ+NP A V AL+S EVD+S I G +ITV WRGKPVFIRHR+ QEI+ AA VN+ L DPQTDA R KPEWLIMVGVCTHLGCVPLGQ+GD+ GWFCPCHGSHYDTSGR+RKGPAPLNL IP Y FLDD VKIG
Sbjct: 3 TQTEADGVTRRDFLYVAGGAFAAVGAAAAAWPLIDQMNPSADVLALSSTEVDLSNIEVGQSITVMWRGKPVFIRHRTEQEIAEAAAVNVASLPDPQTDAERAMKPEWLIMVGVCTHLGCVPLGQRGDYNGWFCPCHGSHYDTSGRIRKGPAPLNLEIPAYEFLDDTTVKIG 173
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A381XET8_9ZZZZ (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381XET8_9ZZZZ) HSP 1 Score: 263 bits (671), Expect = 1.310e-87 Identity = 118/163 (72.39%), Postives = 136/163 (83.44%), Query Frame = 1
Query: 28 TRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQKGDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
TRR FLYI TG A G+ LAWPFIDQ+NPDASVKALAS EVD++ I G +IT+ WRGKPVFIR R+++EI+ A +V +++L DPQ D RVQ PEWLIMVGVCTHLGC+PLGQKGD+ GWFCPCHGSHYDTSGR+RKGPAP NL IP+YVFLDDN VKIG
Sbjct: 8 TRRSFLYITTGTFAAAGSATLAWPFIDQMNPDASVKALASTEVDLTPILPGQSITILWRGKPVFIRRRTSEEIAEAKKVKLDDLPDPQDDEDRVQNPEWLIMVGVCTHLGCIPLGQKGDYNGWFCPCHGSHYDTSGRIRKGPAPKNLEIPQYVFLDDNTVKIG 170
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A2Z4UKV0_9HYPH (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UKV0_9HYPH) HSP 1 Score: 262 bits (669), Expect = 3.350e-87 Identity = 119/171 (69.59%), Postives = 140/171 (81.87%), Query Frame = 1
Query: 19 EEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQK-----GDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
+EPTRRDFLY+ATGA AVG +AWP IDQ+NPDAS ALASIEVDIS + G +ITV WRGKPVFIR R+ +EI+ A VN+ +LRDPQTDA RV KPEWL+MVG+CTHLGCVP GQK GD+ GWFCPCHGSHYDT+GR+R+GPAPLNL +PEY FL D+++KIG
Sbjct: 7 DEPTRRDFLYVATGAFAAVGVAGIAWPLIDQMNPDASALALASIEVDISNVEVGQSITVKWRGKPVFIRRRTEKEIAEADAVNLADLRDPQTDAERVIKPEWLVMVGICTHLGCVPKGQKVADEKGDYDGWFCPCHGSHYDTAGRIRRGPAPLNLEVPEYDFLSDDKIKIG 177
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A2N6BLD3_9HYPH (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6BLD3_9HYPH) HSP 1 Score: 262 bits (669), Expect = 3.350e-87 Identity = 118/177 (66.67%), Postives = 141/177 (79.66%), Query Frame = 1
Query: 1 VTAGHAEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQK-----GDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
+T A + RRDFLYIATGAV AVGAG WP IDQ+NPDA+VKALASIEVD+S + G +ITV WRGKPVF+RHR+ ++I AA V++ LRDPQ+D RVQKPEWL+MVG+CTHLGC+P GQK GD+ GWFCPCHGSHYDT+GR+RKGPAPLNL +P Y FL D ++KIG
Sbjct: 1 MTTNDAVDEKRRDFLYIATGAVAAVGAGLACWPLIDQMNPDATVKALASIEVDLSPVELGQSITVVWRGKPVFVRHRTEEDIKAAEAVDVATLRDPQSDKDRVQKPEWLVMVGICTHLGCIPKGQKVGDDRGDYNGWFCPCHGSHYDTAGRIRKGPAPLNLVVPPYEFLTDEKIKIG 177
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: A0A2E5BTC1_9HYPH (Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BTC1_9HYPH) HSP 1 Score: 263 bits (673), Expect = 3.530e-87 Identity = 119/171 (69.59%), Postives = 140/171 (81.87%), Query Frame = 1
Query: 19 EEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQ-----KGDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
+EPTRRDFLY+ATGA A+G G +AWP IDQ+NPDAS ALASIEVD+S + G AITV WRGKPVFIRHR+A+EI A V++ +LRDPQTDA RV KPEWL+MVG+CTHLGCVP GQ KGD+ GWFCPC GSHYDTSGR+R+GPAPLNL +PEY F D+++KIG
Sbjct: 50 DEPTRRDFLYVATGAFAAIGVGGVAWPLIDQMNPDASALALASIEVDLSPVEVGQAITVKWRGKPVFIRHRTAKEIEEAESVDVLDLRDPQTDADRVIKPEWLVMVGICTHLGCVPKGQQVSDEKGDYDGWFCPCXGSHYDTSGRIRRGPAPLNLEVPEYAFQSDDKIKIG 220
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Match: UPI001A977546 (ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A977546) HSP 1 Score: 262 bits (670), Expect = 3.550e-87 Identity = 120/175 (68.57%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 7 AGHAEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIEVDISAIPAGAAITVTWRGKPVFIRHRSAQEISAAAEVNIEELRDPQTDAARVQKPEWLIMVGVCTHLGCVPLGQK-----GDFGGWFCPCHGSHYDTSGRVRKGPAPLNLAIPEYVFLDDNRVKIG 516
A +E TRRDFLY+AT AVGAVGA ++AWPFID +NP A ALASI+VD+S + G AITVTWRGKPVF+R R+ +EI A VN+ ELRDPQTD RV KPEWL+MVGVCTHLGCVPLGQK GDFGGWFCPCHGSHYDT+GR+R+GPAP NL +PEY FLDD +++G
Sbjct: 15 ASGSEGATRRDFLYLATAAVGAVGAASVAWPFIDSMNPAADTLALASIDVDLSPVQVGQAITVTWRGKPVFVRRRTEEEIQTARAVNVNELRDPQTDEQRVIKPEWLVMVGVCTHLGCVPLGQKATDPKGDFGGWFCPCHGSHYDTAGRIRRGPAPANLHVPEYRFLDDTSIRLG 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7369.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7369.2.1 >prot_P-wetherbeei_contig7369.2.1 ID=prot_P-wetherbeei_contig7369.2.1|Name=mRNA_P-wetherbeei_contig7369.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp VTAGHAEEPTRRDFLYIATGAVGAVGAGALAWPFIDQLNPDASVKALASIback to top mRNA from alignment at P-wetherbeei_contig7369:754..1272- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7369.2.1 ID=mRNA_P-wetherbeei_contig7369.2.1|Name=mRNA_P-wetherbeei_contig7369.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig7369:754..1272- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7369:754..1272- >mRNA_P-wetherbeei_contig7369.2.1 ID=mRNA_P-wetherbeei_contig7369.2.1|Name=mRNA_P-wetherbeei_contig7369.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig7369:754..1272- (Phaeothamnion wetherbeei SAG_119_79)back to top |