mRNA_P-wetherbeei_contig7351.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7351.1.1
Unique NamemRNA_P-wetherbeei_contig7351.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7351.1.1 vs. uniprot
Match: A0A177VVP7_9BASI (Uncharacterized protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VVP7_9BASI)

HSP 1 Score: 55.5 bits (132), Expect = 3.100e-5
Identity = 42/160 (26.25%), Postives = 70/160 (43.75%), Query Frame = 1 
Query:  445 EAFQNFDRGGTGEICEDDLDEGLRMLGLGLSRTDVHRLMLEYEGTKPGSIRYRDILHVTSGRLITARRQSQQDRLDVLAARLRHDLGAAALLDLDPGIELRQAF---DCTQSATMGAAHFRKTLDSLGMRPSEDEAQLLLDVLDENALGRINRRAFLVLM 915
            EAF+ FD    G I   +L   +R LG  L +T+VH+L+ +Y+ +  G I + D       R++T R                       + + DP  E+R+AF   D   S  +   + ++    LG    +DE Q ++D  D +  G I+   F+ +M
Sbjct:   68 EAFELFDTNKDGAIGYHELKVAMRALGFDLKKTEVHKLIKDYDRSGQGLIEWEDF-----NRIMTQR-----------------------IAERDPIDEIRRAFSLFDDDNSGRISLRNLKRVAKELGENLDDDELQAMIDEFDLDQDGEISEEEFIKIM 199
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A177VVP7_9BASI3.100e-526.25Uncharacterized protein n=2 Tax=Tilletia TaxID=132... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7351contigP-wetherbeei_contig7351:1367..3114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog80637.XP_007763681.1
Preferred nameCDC31
PFAMsEF-hand_1,EF-hand_6,EF-hand_7,EF-hand_8
Model size1378
Max annot lvl4751|Fungi
KEGG koko:K16466
KEGG TC1.I.1
Hectar predicted targeting categorymitochondrion
GOsGO:0000226,GO:0000278,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005815,GO:0005816,GO:0005825,GO:0005856,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0015630,GO:0016020,GO:0016021,GO:0016043,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0022402,GO:0022607,GO:0030163,GO:0030474,GO:0031023,GO:0031109,GO:0031224,GO:0031323,GO:0032991,GO:0034622,GO:0042325,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044732,GO:0046785,GO:0046872,GO:0050789,GO:0050790,GO:0050794,GO:0051174,GO:0051258,GO:0051300,GO:0051338,GO:0051603,GO:0061496,GO:0065003,GO:0065007,GO:0065009,GO:0070390,GO:0071704,GO:0071840,GO:0097435,GO:1901564,GO:1901565,GO:1901575,GO:1903047,GO:1903087
Exons4
Evalue3.12e-05
EggNOG OGsCOG5126@1|root,KOG0028@2759|Eukaryota,3A26G@33154|Opisthokonta,3P2QQ@4751|Fungi,3V0WC@5204|Basidiomycota,228UI@155619|Agaricomycetes
DescriptionCa2 -binding EF-hand
Cds size1374
COG categoryT
BRITEko00000,ko03019,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186975.766029-CDS-P-wetherbeei_contig7351:1366..14521683186975.766029-CDS-P-wetherbeei_contig7351:1366..1452Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7351 1367..1452 +
1683186975.778165-CDS-P-wetherbeei_contig7351:1545..20131683186975.778165-CDS-P-wetherbeei_contig7351:1545..2013Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7351 1546..2013 +
1683186975.787894-CDS-P-wetherbeei_contig7351:2170..22761683186975.787894-CDS-P-wetherbeei_contig7351:2170..2276Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7351 2171..2276 +
1683186975.8001733-CDS-P-wetherbeei_contig7351:2398..31121683186975.8001733-CDS-P-wetherbeei_contig7351:2398..3112Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7351 2399..3112 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7351.1.1prot_P-wetherbeei_contig7351.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7351 1367..3112 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7351.1.1

>prot_P-wetherbeei_contig7351.1.1 ID=prot_P-wetherbeei_contig7351.1.1|Name=mRNA_P-wetherbeei_contig7351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=458bp
CARFGRPWTAAPDRLFRAVRRGGRGTLSRSMFEDALSALGVQLSASEMHM
LAHGCMDKKDDGRIDYIECVEQERSTRLCSLDSLRREKFPTAGGSQGRLS
HPPPLTINPTYPCGKRAQVLRRSGVEEAVASLCKMMLAAEGDGAGNCLEA
FQNFDRGGTGEICEDDLDEGLRMLGLGLSRTDVHRLMLEYEGTKPGSIRY
RDILHVTSGRLITARRQSQQDRLDVLAARLRHDLGAAALLDLDPGIELRQ
AFDCTQSATMGAAHFRKTLDSLGMRPSEDEAQLLLDVLDENALGRINRRA
FLVLMEEAQSPAAAAGTARTPRGARMRRGAARTPRPSRTPRGVAWTPRGS
SPRRGLAQASSPVAGTRAAGALERRRSGRDVWESKVSWDSAALSGSADSG
GTARHADMDDDLIDSSHKTEAHRDSDPSPAAKRWAGKTGKGLGGRDGRYR
QQSGRHEN
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mRNA from alignment at P-wetherbeei_contig7351:1367..3114+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7351.1.1 ID=mRNA_P-wetherbeei_contig7351.1.1|Name=mRNA_P-wetherbeei_contig7351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1748bp|location=Sequence derived from alignment at P-wetherbeei_contig7351:1367..3114+ (Phaeothamnion wetherbeei SAG_119_79)
TGCGCGCGATTTGGACGACCTTGGACGGCGGCGCCTGACCGACTTTTTCG
TGCGGTTCGACGGGGCGGGCGTGGCACCCTCTCAAGGTGGGTAATCACAA
TGGTTCGTTTCCTCCGGCAACCACTTCCGATTTGATATTTTCTGCCTCTT
CTCTCCCTTCCGCCGCTAGTGATCACCAGGTCTATGTTTGAGGACGCATT
GTCCGCACTCGGGGTGCAGCTGTCGGCCTCCGAGATGCACATGCTGGCTC
ACGGCTGCATGGACAAGAAGGATGACGGGAGGATCGACTACATCGAATGC
GTCGAGCAGGAAAGGAGCACGCGGCTTTGTTCTCTTGATTCATTGAGAAG
GGAAAAATTTCCCACAGCTGGCGGTTCGCAGGGTAGACTGTCTCACCCGC
CGCCACTCACAATCAATCCCACTTACCCATGCGGAAAACGCGCACAGGTG
CTGCGCCGAAGCGGTGTCGAGGAAGCAGTGGCATCGCTATGCAAGATGAT
GCTGGCCGCGGAGGGCGACGGCGCCGGCAATTGCCTCGAGGCTTTCCAGA
ACTTCGACCGCGGCGGAACCGGCGAGATCTGTGAGGACGACCTCGACGAG
GGCCTGCGGATGCTCGGGCTGGGACTGTCGAGGACCGACGTCCACAGGTT
GGGAGGGAAATGGTTGGTGTGTTGCGCTGCTTTCTTTCAATCTGAAGCTG
TCTGGCAGCTGTCGCATTTCCCTTCATCCAGTTCGCGTTGCTATCTATTG
ATAGATGCATCACTTCGCTTCGTTTGAATCCCCCGCTGCACTCTTTGAAC
GCAGGCTGATGCTGGAATACGAAGGCACCAAGCCCGGCAGCATCCGTTAC
CGCGACATTCTGCACGTCACCAGCGGCCGGTTGATCACCGCACGTCGCCA
GAGCCAACAGGTGAGCCGTCACATGCATGATTCTTTGGAACAAGAAGGCT
GTAGCTGAAACGTGCCTAGAAAGCAGTCGAACTCCTCAATGCGCTCAAAC
CATCCAATCACTCTCTTCCTTCCCCTCTCTAGGACCGCCTGGACGTGCTG
GCGGCGCGGCTGCGCCACGACCTGGGCGCCGCGGCGCTGCTGGACCTGGA
CCCAGGCATTGAGCTTCGCCAGGCATTCGATTGCACCCAATCTGCCACGA
TGGGCGCCGCCCACTTCCGCAAAACGCTCGACTCGCTCGGGATGCGGCCG
TCGGAAGACGAAGCGCAGCTGCTGCTGGATGTGCTCGACGAAAATGCCCT
CGGAAGAATCAATCGGCGGGCATTTCTCGTCCTCATGGAAGAGGCGCAGT
CCCCGGCGGCGGCCGCCGGGACCGCACGCACGCCGCGGGGAGCACGGATG
AGGCGCGGGGCAGCGCGGACGCCGCGGCCCTCTCGGACGCCACGCGGTGT
CGCATGGACGCCGCGAGGGTCGTCACCGCGGCGGGGGTTGGCGCAGGCGT
CGAGCCCCGTGGCGGGAACGAGGGCGGCGGGGGCGTTGGAGCGTCGGCGG
AGCGGCCGGGACGTGTGGGAGAGCAAGGTGTCCTGGGACTCAGCGGCGCT
GTCGGGCAGCGCGGACAGCGGTGGGACGGCACGGCATGCTGACATGGATG
ACGATCTGATCGACAGCAGCCACAAGACGGAGGCGCACCGGGATTCAGAT
CCGTCACCGGCCGCGAAGCGTTGGGCTGGGAAGACGGGGAAAGGGTTGGG
CGGGAGGGACGGAAGGTATAGGCAGCAATCCGGAAGGCACGAGAATCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7351:1367..3114+

>mRNA_P-wetherbeei_contig7351.1.1 ID=mRNA_P-wetherbeei_contig7351.1.1|Name=mRNA_P-wetherbeei_contig7351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1374bp|location=Sequence derived from alignment at P-wetherbeei_contig7351:1367..3114+ (Phaeothamnion wetherbeei SAG_119_79)
TGCGCGCGATTTGGACGACCTTGGACGGCGGCGCCTGACCGACTTTTTCG
TGCGGTTCGACGGGGCGGGCGTGGCACCCTCTCAAGGTCTATGTTTGAGG
ACGCATTGTCCGCACTCGGGGTGCAGCTGTCGGCCTCCGAGATGCACATG
CTGGCTCACGGCTGCATGGACAAGAAGGATGACGGGAGGATCGACTACAT
CGAATGCGTCGAGCAGGAAAGGAGCACGCGGCTTTGTTCTCTTGATTCAT
TGAGAAGGGAAAAATTTCCCACAGCTGGCGGTTCGCAGGGTAGACTGTCT
CACCCGCCGCCACTCACAATCAATCCCACTTACCCATGCGGAAAACGCGC
ACAGGTGCTGCGCCGAAGCGGTGTCGAGGAAGCAGTGGCATCGCTATGCA
AGATGATGCTGGCCGCGGAGGGCGACGGCGCCGGCAATTGCCTCGAGGCT
TTCCAGAACTTCGACCGCGGCGGAACCGGCGAGATCTGTGAGGACGACCT
CGACGAGGGCCTGCGGATGCTCGGGCTGGGACTGTCGAGGACCGACGTCC
ACAGGCTGATGCTGGAATACGAAGGCACCAAGCCCGGCAGCATCCGTTAC
CGCGACATTCTGCACGTCACCAGCGGCCGGTTGATCACCGCACGTCGCCA
GAGCCAACAGGACCGCCTGGACGTGCTGGCGGCGCGGCTGCGCCACGACC
TGGGCGCCGCGGCGCTGCTGGACCTGGACCCAGGCATTGAGCTTCGCCAG
GCATTCGATTGCACCCAATCTGCCACGATGGGCGCCGCCCACTTCCGCAA
AACGCTCGACTCGCTCGGGATGCGGCCGTCGGAAGACGAAGCGCAGCTGC
TGCTGGATGTGCTCGACGAAAATGCCCTCGGAAGAATCAATCGGCGGGCA
TTTCTCGTCCTCATGGAAGAGGCGCAGTCCCCGGCGGCGGCCGCCGGGAC
CGCACGCACGCCGCGGGGAGCACGGATGAGGCGCGGGGCAGCGCGGACGC
CGCGGCCCTCTCGGACGCCACGCGGTGTCGCATGGACGCCGCGAGGGTCG
TCACCGCGGCGGGGGTTGGCGCAGGCGTCGAGCCCCGTGGCGGGAACGAG
GGCGGCGGGGGCGTTGGAGCGTCGGCGGAGCGGCCGGGACGTGTGGGAGA
GCAAGGTGTCCTGGGACTCAGCGGCGCTGTCGGGCAGCGCGGACAGCGGT
GGGACGGCACGGCATGCTGACATGGATGACGATCTGATCGACAGCAGCCA
CAAGACGGAGGCGCACCGGGATTCAGATCCGTCACCGGCCGCGAAGCGTT
GGGCTGGGAAGACGGGGAAAGGGTTGGGCGGGAGGGACGGAAGGTATAGG
CAGCAATCCGGAAGGCACGAGAAT
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