mRNA_P-wetherbeei_contig734.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig734.4.2
Unique NamemRNA_P-wetherbeei_contig734.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: D7FQB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB0_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 5.030e-85
Identity = 191/466 (40.99%), Postives = 237/466 (50.86%), Query Frame = 2
Query:  104 MFVNTSAVYGLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGSCLTRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQL-ELKMELCDSAKPLRAVLWSPHGGDDA---------VTIGSDRLKNWSLTAA----AATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNANAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            MF + S+ Y LK P RCIAA+    ES + +  GG         F+VGT +LRE   NELH L F E++NE++C QA SHP EIW ++PS  DPSLL TC+N A  G    GVG  ++ LWR+P    N D                    V GG     + G  L+ + E   EL        A+LWSP GG            VT+    LK W+L       A +AT   GG       +G  A ++     A AWDPH    VA A  C V  WDLR+MK +  V+ AH + VRD+DYNP+KP  LATCGEDRL+                                               R+SS+SSAPLLE ED D   GG  G  G XXXXXX       G + E+ADI+VR+F+ HEESVYS+AWSA D W+ ASLSYDG + ++HVPSTEKYKILL
Sbjct:    1 MFSSASSTYNLKRPARCIAALAPQEESPEEEQQGGISSS----RFVVGTCSLRE--PNELHVLGFHEESNELLCHQALSHPNEIWGVSPSPTDPSLLVTCSNGAKAGQNNGGVGFKVS-LWRLPTPDPNDDPLHEH---------------VMGG-----ERGHPLEPIGEPLAELGGLKAAATAMLWSPPGGGSTSSRGGAGEFVTLADGLLKRWNLGDGRFEEAGSATVCEGG-------QGGGATAAGRGAPAAAWDPHRPVEVATAASCSVTCWDLRTMKATTSVAEAHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSDCMVHLWRVSSVSSAPLLEPEDDD--AGGLDGDAGXXXXXXXXX--XXXGSKGEAADIRVRTFDEHEESVYSLAWSASDAWVMASLSYDGLVVLNHVPSTEKYKILL 428          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: A0A835Z343_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z343_9STRA)

HSP 1 Score: 206 bits (524), Expect = 5.600e-58
Identity = 161/459 (35.08%), Postives = 203/459 (44.23%), Query Frame = 2
Query:  104 MFVNTSAVY-GLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCAN--VAGGGGTGEGVGSCL--TRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLELKMELCDSAKPLRAVLWSPHG-GDDAVTIGSDRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNANAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            M+ N SA Y GLKLP R +AA+ TG +              + H FL GT  L+E  +NEL  L F +DTNE+ C   +SHP EIW LAP   D +L+ +C N    G GG             LWR+P                   SP   G S          S    + ++    L  +AKP  A+LW P G G+ AVT+    L  W L+ AAA        A T    +G AA +      A AWDPH   +VAVA GC +R  D RS      V+ AH Y  RDVDY+P+KP  + TCGEDRLL                                                R+SS+ +AP   L DG+ D               X       G  A  AD+  R++ GHE+SV +VAWSARD W+  SL +DGR+   HVPS EKYKILL
Sbjct:    1 MYSNASAAYDGLKLPSRALAAV-TGDK--------------DHHAFLAGTCCLKE--ANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQ--------------SPSSSGNS----------SEPASQPIDKVASLGSAAKPACALLWEPGGQGNRAVTVAGGDLVRWELSGAAARE------ATTVRVTEGGAAAA------AAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDX--------------XXXXXXXXGDGA--ADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 390          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: A0A7S2HX18_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HX18_9STRA)

HSP 1 Score: 182 bits (461), Expect = 7.020e-49
Identity = 142/461 (30.80%), Postives = 197/461 (42.73%), Query Frame = 2
Query:  104 MFVNTSAVYGLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGSCLTRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLEL-KMELCDSAKPLRAVLWSPHGG----DDAVTIGSDRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNANAVAVAV-GCDVRFWDLRSM--KQSHQVSGAHSYG-VRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            MF ++S  YG KL  RC+ A    +E                H FL+G+T+LRE   NE+  + + +++    C   F H  EIW ++PS RD SLL T  + A G G           LW+M   T+             T +P GR  S+             L    L ++   +    L  +LW         +  V +     +   ++ A+            Q +   SA+V     + AGA DP+ A     +V G D+  WD R+   K +  V GAH YG +RD+DYNP+K H +AT GEDRL+                                               R+SSISSAPLLELE                            G  A++ D  +R+F+ HE+SVY+VAWSA D W+FASLSYDGR+  ++VPSTEKYKILL
Sbjct:    1 MFSSSSCAYGGKLQSRCLVAQEANSEQ---------------HRFLIGSTSLRE--ENEVQLVDYNQESGMATCLHVFPHAHEIWHMSPSPRDASLLITSFHGAQGPGA---------VLWKMNTTTEPDPLTNDAQSDDVTSAPDGRARSM------------SLANANLDEVTTFECVDGLPRILWEQKSASTNQERLVALDEHAFRVLDMSEASV-----------QVTDTSSASVGR---IMAGALDPYGAGHTLSSVSGVDISVWDCRTSITKPTINVEGAHEYGSIRDIDYNPNKRHVVATSGEDRLIKFWDLRSPGEPMRILAGHSHWVPCIKFNRFHDQLLVSGGTDSYVNLWRVSSISSAPLLELEG--------------------------EGNCADAGDASIRTFDDHEDSVYAVAWSACDAWVFASLSYDGRVVFNNVPSTEKYKILL 383          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: A0A7S1XM21_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM21_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.380e-46
Identity = 192/456 (42.11%), Postives = 244/456 (53.51%), Query Frame = 2
Query:  104 MFVNTSAVYGLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGSCLTRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSV---YGGXXXXXDSGDGLKQLELKMELCDS-AKPLRAVLWSPHGGDDAVTIGSDRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNANAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            M+ + S+VY L++  RCI       + A+           E H FL GTT+ ++   NELH + FQED +E+     +S PGE+WALA S  DP+L+        G   G         + R+PE+   G XXXXXX      S       V   YG            KQ  +    CD    P+  + +     DD+      RL ++          G GG     AS+    AV+      A  W+PH  + VAVA GC V  WDLRS  ++ +V  AH +G   +DYNP++P    T GEDR +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRI+SISS PL+ELE GD D                          +ESAD+KV +FE HE+SVYS++WSA   W+F+SLS+DGR+ +  VP  EKYKILL
Sbjct:    1 MYSSNSSVYSLQVQARCIVP-----QQAQR----------ERHRFLAGTTSRKK--DNELHVVEFQEDQHELFGSAIYSMPGEVWALAASPHDPALVAASVRTPAGFQNG---------ILRLPEEAAAGXXXXXXXDDSFVSSRVESSADVVVTYGAATR--------KQEAILYHPCDEDTAPVHEIAFM----DDSTL----RLCDF----------GDGGTLREAASL----AVAGGEDAAAACWNPHKHDQVAVASGCGVAQWDLRSGAKAQEVPRAHEFGCTSLDYNPNRPFFFVTAGEDRFIKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRITSISSQPLVELE-GDEDG-------------------------SESADVKVLTFEEHEDSVYSLSWSAYTAWIFSSLSHDGRVILHQVPEAEKYKILL 374          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: UPI000719C541 (protein TSSC1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C541)

HSP 1 Score: 172 bits (437), Expect = 3.300e-45
Identity = 133/437 (30.43%), Postives = 191/437 (43.71%), Query Frame = 2
Query:  176 AESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHP-GEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGSCLTRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLELKMEL-CDSAKPLRAVLWSPHG-GDDAVTIGSDRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVR--AGAWDPH-NANAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPL---LELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            A+ A+ DD+           FLVGT +L+    N++H++ F +D N I+ +  F+H  GEIW ++ S  D ++L TC N        +        LWR+P + D G                              D+      L+L   L  DS   + +VLW P+G GD  +T+G  R   W L A+            TQA+M G A++ +    +  AG W+PH NA  +A A    +R WDLRSM+Q   +  AH   VR++D+NP+K + LA+CG+D                                                   ++SISS PL   +E E+ D D    +   G                RA   +  + S+E HE+SVY+  WS  DPWLFASLSYDGR+ ++ VP  EKYKILL
Sbjct:   39 AQVAETDDI----------RFLVGTQSLK--FDNQIHQIDF-DDENNILNKNVFAHKDGEIWHISASPVDKNILATCFN-----NVSDTKCEMAAALWRIPAEFDVG----------------------------LDDTSSSSHSLQLLCRLEHDSYSNMFSVLWQPNGEGDKVITMGEGRFLTWDLNASG-----------TQATMTGVASLEAKGQPKFTAGRWNPHSNATQIATANDTSIRLWDLRSMEQVSNIDVAHMQCVRNLDFNPNKQYYLASCGDDCKTKFWDTRKTDEPLLVLSDHSHWVWSVRFNHFHDQLVLTSSSDSRVILTSVASISSEPLGHLVEGEESDDDXXXXSSRDGQK--------------RAPQTNGVLASYEEHEDSVYAAEWSTADPWLFASLSYDGRVVINRVPRAEKYKILL 404          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: W7T6L5_9STRA (Protein tssc1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6L5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.950e-44
Identity = 148/486 (30.45%), Postives = 199/486 (40.95%), Query Frame = 2
Query:  119 SAVYGLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGSCLTRLWRM--PE---------DTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLELKMELCDSAKPL-------------------RAVLWSPHGGDDA--VTIGSDRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNANAVAVAVGCDVRFWDLR-----SMKQSHQVSG-AHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            + VYG K   RC+AA+       K D         E H F VG   LR+   NEL  L + E+TN++    A+SHPGEIW ++PS RD SL FT +   G           L  LWR+  PE           D GD         T  SP  + ++           G   +   +K     S +PL                   R VLW P    +   + +  ++ + ++L           G +  Q        V     V+A AWDPH+   VA+A G  +R  D+R      M ++ Q SG  H +GV+DVD+N  KP+   T GEDRL+                                                RISSISSAPL E E+G                              E+ D++V + + HEESVY+V WSA DP+LFASLSYDGR+ V+ VP +EKYKILL
Sbjct:   10 AVVYGAKNQSRCLAAV-------KGDH--------EHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGA--------DPLCTLWRLSLPEFPHSPPSSPSKDAGDMPRST----TRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLWGPEQETNGKVLAVDGEKARLYALQ----------GSSDAQEMSNFDLGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEEGP-----------------------------EAPDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: A0A5D6Y0E6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0E6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 5.210e-44
Identity = 134/457 (29.32%), Postives = 191/457 (41.79%), Query Frame = 2
Query:  104 MFVNTSAVYGLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGS-CLTRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLELKMELCDSAKPLRAVLWSPHGGDDAVTIGSDR---LKNWSLTAAAATATGAGGGAPTQASMKGSAAV-SSDHSVRAGAWDPHNANAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            MF   +  + +    RC+ A+    E+A+               FLVGTT+L++   N++H L F    NE+   Q ++HP ++  LAPS     L+ TC         G+ VG   +  LWRM +D  NG           + +P                       L +  EL     P+ +V W+        T+ S     L+ WSL    + AT        Q  ++   ++ SS  +V A  WDPH+ N V+  +G  V+ WD R+   +  V  AH     D+DYNP+KP  LA+ G+D  L                                               R+SSISSAP++EL++ D      AG                    A+  D  VR +  HE+SVY+VAW A D WLF S+S+DGR  V+HVPSTEKYKILL
Sbjct:    1 MFSAGACSFSVGSKVRCLEALLGDKENAR---------------FLVGTTSLQQ--PNQIHVLDFDSAANEVTRTQVYAHPSQVQELAPSPFAKDLVVTC---------GKRVGERAVATLWRM-DDLSNGGGGEERAGGVESPTP-----------------------LVVLTELPQQKLPVSSVAWNVGDESATATLASAHGTALRTWSLLVGGSEAT-------VQDKLELDVSLASSPTAVGALRWDPHHPNYVSYTLGGSVQTWDTRAKSVAFAVEDAHLQAALDIDYNPNKPFCLASGGDDGKLKFWDLRQARQPLLALAAHAHWVWSVRYNRFHDQLVLSASSDSTLALWRVSSISSAPIVELDEQDFMSEAAAG--------------------ADVVDTNVRRYAEHEDSVYAVAWGASDSWLFGSVSFDGRFCVNHVPSTEKYKILL 380          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: A0A2R5GQ58_9STRA (Nuclear distribution protein PAC1-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQ58_9STRA)

HSP 1 Score: 170 bits (430), Expect = 6.190e-44
Identity = 156/501 (31.14%), Postives = 205/501 (40.92%), Query Frame = 2
Query:  104 MFVNTSAVYGLKL--PCRCIAAMGTGAESAKNDDVGGAGEGGEP------------HLFLVGTTALRE----GASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGV-------GSCLTRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLELKMELCDSAKPLRAVLWSPH--------GGDD------------AVTIGSDRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNANAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNM----GRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            MF + +AV  +    PCRC+ A+ T A SA  D     G G +             HLFL GT  L      G +NE+    + E  N++       HPGE+W LAP      LL T   +AG G   +G+          L  L R+P  TD+                                                    LR +LW P         GG+D            AV  G  RL  W +  +            TQ    G+ ++ S  S+ A  WDPH+ + V+V  G  V   DLRSM+ + ++ GAH  GVRD+DYNP+KP+ L T GEDR +                                               R+SSISSAPLL L+D D            XXXX  +     G S     +E+AD  V+S+E H +SVYSVAWSA + W+FASLS DG++ V+HVPS EKYKILL
Sbjct:    1 MFSSGAAVQSVSADKPCRCVEALPT-ATSATLDGGDSLGAGADAALDDFDEVHADKHLFLAGTQRLGAEEDTGDANEIVLFEYLEAGNKLETRARMKHPGEVWQLAPHATRRDLLLT---IAGTGVERQGMLFRFDADAGSLNELARVPTTTDH---------------------------------------------------TLRKLLWHPPETSAAGSLGGEDFEDDHELSERFLAVHDGLVRL--WDVEQSL-----------TQMDDIGTCSLPSPRSLGAACWDPHHIHEVSVGSGDKVVGIDLRSMEITRRIDGAHKLGVRDLDYNPNKPYHLVTGGEDRRVKFWDVRKPDQPLKVILAHDHWVGAVRYNRFHDQLVLSAGTDSHVSLWRLSSISSAPLLGLDDDDXXXXXXXXXXXXXXXXDTDAHSKGGASTAASTSETADGLVKSYEDHADSVYSVAWSAAEAWVFASLSIDGKLVVNHVPSAEKYKILL 433          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: A0A2R5LBL5_9ACAR (Putative wd repeat protein n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LBL5_9ACAR)

HSP 1 Score: 162 bits (410), Expect = 1.510e-41
Identity = 126/454 (27.75%), Postives = 196/454 (43.17%), Query Frame = 2
Query:  113 NTSAVYGLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGSCLTRLWRMPED--TDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLE--LKMELCDSAKPLRAVLWSPHGGDDAVTIGSDRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNA-NAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKILL 1459
              + +YG++ P R + A+     SA+ D V           FLVGT +L+    N++H LA+ E+TN +         GE+W L+ S  D +L  +C N      T +G       +W++P+   TD+             ++P               DS   L  LE   K++     K +  ++W P  GD   ++  + L  W L  +  TAT  G        +KG+  ++        AW+PH + + +A AV   V+ +DLRSM+Q  Q+ GAH   VR++D+NP++ + LATCG+D L                                                R++SISS P   L D +                       +   +    D  + ++E HE+SVY+V WSA DPW+FASLSYDGR+ ++ VP  EKY++LL
Sbjct:    4 EAAVIYGIEFPARTLTAL-----SAETDTV----------CFLVGTQSLK--FDNQIHFLAYDEETNSLSKSVFLHGAGEVWHLSCSPTDKTLFASCYNEV----TQDGKCEMRGAIWKLPDTLPTDH-------------VTP-------------PDDSSTSLPNLEKLTKLDTKKYGKEVCRIIWEPSKGDRIASLVDNNLLLWDLAKSDETATLTG---CITVELKGNPKLT------CAAWNPHQSCSVIATAVDTAVKAFDLRSMQQVWQIEGAHGQLVREMDFNPNRQYFLATCGDDCLAKFWDVRNPSSPVLVLDDHSHWVWSVRYNHFHDQLVLTSSSDSRVMLSRVASISSEPFGHLVDDE------------------EKPEEQNVAQVCEKDGVIATYEEHEDSVYAVQWSAADPWMFASLSYDGRLVLNRVPRAEKYRVLL 383          
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Match: D0NU27_PHYIT (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0NU27_PHYIT)

HSP 1 Score: 160 bits (406), Expect = 5.050e-41
Identity = 165/415 (39.76%), Postives = 222/415 (53.49%), Query Frame = 2
Query:  236 FLVGTTALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTCANVAGGGGTGEGVGSCLTRLWRMPEDTDNGDXXXXXXXXXTTLSPRGRGYSVYGGXXXXXDSGDGLKQLELKMELCDSAKPLRAVLWSPHGGDDAVTIGSDR---LKNWSLTAAAATATGAGGGAPTQASMKGSAAV---SSDHSVRAGAWDPHNANAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCGEDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISSISSAPLLELEDGDIDVGGGAGHHGAXXXXXXNMGRSRLGGRAESADIKVRSFEGHEESVYSVAWSAR-DPWLFASLSYDGRITVDHVPSTEKYKILL 1459
            F VGT+ L +   N++H +   +D + ++  Q F+HPGE+ +LAPS +D  LL TC    G              LW++P++               T S    G +V              + LE          P+  V W      D  T+ S     L+ W L+         GG    Q  ++   ++   ++     A AWDPH+A+ +A A+G  VR WDLR+ +    +  AH      +D+NP+KP+ LA+ G+D  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR+SSISS+PL+EL++ D+                         G A  AD  +R  E HE++VY+  W+A  D W+F S+SYDGR+ V+HVPSTEKYKILL
Sbjct:   30 FFVGTSTLNQ--PNQIHLVQVDDDASNVMTRQVFNHPGEVLSLAPSPQDAQLLVTCGKQRGQ--------QAEASLWKLPDEDTR------------THSGEEDGAAV-------------AQDLEQLAAFPAQKLPVSEVAWDATA--DTSTLASSHETLLRTWQLS---------GGSVEAQDKLELDVSMLGGTTKKGASALAWDPHHASQLAFALGGSVRTWDLRAKQDKVSIEDAHPSATLSLDFNPNKPYALASGGDDGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVSSISSSPLVELDERDL--------------------MDETAGGAAVADTLIRRIEEHEDAVYAARWAAGGDAWMFVSVSYDGRLAVNHVPSTEKYKILL 378          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig734.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB0_ECTSI5.030e-8540.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z343_9STRA5.600e-5835.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2HX18_9STRA7.020e-4930.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XM21_9STRA4.380e-4642.11Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
UPI000719C5413.300e-4530.43protein TSSC1-like n=1 Tax=Priapulus caudatus TaxI... [more]
W7T6L5_9STRA2.950e-4430.45Protein tssc1 n=2 Tax=Nannochloropsis gaditana Tax... [more]
A0A5D6Y0E6_9STRA5.210e-4429.32Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2R5GQ58_9STRA6.190e-4431.14Nuclear distribution protein PAC1-1 n=1 Tax=Hondae... [more]
A0A2R5LBL5_9ACAR1.510e-4127.75Putative wd repeat protein n=1 Tax=Ornithodoros tu... [more]
D0NU27_PHYIT5.050e-4139.76Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig734contigP-wetherbeei_contig734:3073..5996 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQB0
Preferred nameTSSC1
PFAMsWD40
Model size1503
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009787,GO:0009788,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0016567,GO:0019538,GO:0023051,GO:0023057,GO:0031461,GO:0032386,GO:0032388,GO:0032446,GO:0032879,GO:0032991,GO:0036211,GO:0040012,GO:0040017,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046662,GO:0048518,GO:0048519,GO:0048520,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050795,GO:0051049,GO:0051050,GO:0051239,GO:0051240,GO:0060341,GO:0065007,GO:0070647,GO:0071704,GO:0080008,GO:0090325,GO:0090326,GO:1901046,GO:1901419,GO:1901420,GO:1901564,GO:1902494,GO:1903649,GO:1903651,GO:1904809,GO:1904811,GO:1905957,GO:1905958,GO:1990234,GO:2000241,GO:2000243
Exons6
Evalue2.02e-86
EggNOG OGsKOG1007@1|root,KOG1007@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-01_006800.1
Descriptionpositive regulation of dense core granule transport
Cds size1359
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig734.4.2prot_P-wetherbeei_contig734.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig734 3114..5893 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186973.741829-UTR-P-wetherbeei_contig734:3072..31131683186973.741829-UTR-P-wetherbeei_contig734:3072..3113Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig734 3073..3113 -
1683186974.909604-UTR-P-wetherbeei_contig734:5893..59961683186974.909604-UTR-P-wetherbeei_contig734:5893..5996Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig734 5894..5996 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186974.8299005-CDS-P-wetherbeei_contig734:3113..32601683186974.8299005-CDS-P-wetherbeei_contig734:3113..3260Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 3114..3260 -
1683186974.8435106-CDS-P-wetherbeei_contig734:3520..37051683186974.8435106-CDS-P-wetherbeei_contig734:3520..3705Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 3521..3705 -
1683186974.8540945-CDS-P-wetherbeei_contig734:3991..40791683186974.8540945-CDS-P-wetherbeei_contig734:3991..4079Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 3992..4079 -
1683186974.8664718-CDS-P-wetherbeei_contig734:4367..44841683186974.8664718-CDS-P-wetherbeei_contig734:4367..4484Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 4368..4484 -
1683186974.8865576-CDS-P-wetherbeei_contig734:4863..54571683186974.8865576-CDS-P-wetherbeei_contig734:4863..5457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 4864..5457 -
1683186974.898851-CDS-P-wetherbeei_contig734:5665..58931683186974.898851-CDS-P-wetherbeei_contig734:5665..5893Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 5666..5893 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig734.4.2

>prot_P-wetherbeei_contig734.4.2 ID=prot_P-wetherbeei_contig734.4.2|Name=mRNA_P-wetherbeei_contig734.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=453bp
MFVNTSAVYGLKLPCRCIAAMGTGAESAKNDDVGGAGEGGEPHLFLVGTT
ALREGASNELHRLAFQEDTNEIICEQAFSHPGEIWALAPSRRDPSLLFTC
ANVAGGGGTGEGVGSCLTRLWRMPEDTDNGDGGGGGGGGGTTLSPRGRGY
SVYGGGAGGGDSGDGLKQLELKMELCDSAKPLRAVLWSPHGGDDAVTIGS
DRLKNWSLTAAAATATGAGGGAPTQASMKGSAAVSSDHSVRAGAWDPHNA
NAVAVAVGCDVRFWDLRSMKQSHQVSGAHSYGVRDVDYNPHKPHTLATCG
EDRLLRFWDLRKPEKPLRSVLAHTHWAWTVRYNKFHDQLLLSGGSDGMVN
LWRISSISSAPLLELEDGDIDVGGGAGHHGAGGSGGGNMGRSRLGGRAES
ADIKVRSFEGHEESVYSVAWSARDPWLFASLSYDGRITVDHVPSTEKYKI
LL*
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mRNA from alignment at P-wetherbeei_contig734:3073..5996-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig734.4.2 ID=mRNA_P-wetherbeei_contig734.4.2|Name=mRNA_P-wetherbeei_contig734.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2924bp|location=Sequence derived from alignment at P-wetherbeei_contig734:3073..5996- (Phaeothamnion wetherbeei SAG_119_79)
GCCGCTCTTTGCGAGTGTGTGGAAGCAGCTGGGGTGGCGGCTGCCTGTTT GCATCGAAACAGTGATCGTCCCTGGATTTCTGATTGGAATTTGGAGGAAC CCGATGTTCGTTAACACTTCAGCAGTGTACGGCCTGAAGTTGCCCTGCCG CTGCATCGCGGCCATGGGAACGGGAGCCGAAAGCGCGAAAAACGACGATG TGGGCGGAGCGGGCGAAGGCGGGGAGCCTCATCTCTTCCTCGTAGGGACA ACCGCACTAAGGGAAGGCGCTTCGAACGAACTGCATCGTTTGGCCTTTCA GGAGGACACCAACGAGATCATATGCGAGCAGGTCTGCAAAACTTCTGGGA TTTTTCTCTTCTACTCTGCTTTTGCTATCCTTCGTATTTTCTTGCTGCAC ACTGTCAGTCTTTGTATGCAATGCAAGGCTCGAGCCGCTCGTGCAATTTG ATGATGGAGGAGCTCTCTAGGCTTTCCATTTGTAAGAATCCAACCGCACA AGACTTGTGTGGAAACCAAACGCCTCTCCCCTTTCGCAGGCCTTCTCGCA TCCTGGCGAAATATGGGCGCTGGCGCCGAGCCGGCGGGACCCGAGCCTCC TCTTCACCTGCGCCAACGTAGCGGGCGGCGGCGGCACCGGCGAGGGCGTC GGCTCCTGCCTCACCCGTCTCTGGCGGATGCCCGAGGACACTGACAACGG GGATGGCGGCGGAGGCGGCGGCGGCGGCGGTACCACGCTCAGCCCGCGAG GTCGCGGTTACAGCGTCTATGGAGGCGGCGCAGGCGGCGGCGACAGCGGC GACGGCCTCAAGCAGCTCGAGCTCAAGATGGAGCTGTGTGACAGTGCCAA GCCCCTGCGCGCTGTCCTCTGGAGCCCTCACGGCGGCGACGACGCCGTCA CCATCGGCAGCGACCGCCTCAAGAACTGGTCACTGACCGCGGCCGCCGCC ACTGCGACGGGCGCTGGCGGCGGCGCACCGACGCAGGCGTCAATGAAGGG GTCGGCGGCAGTGAGCAGCGACCACTCGGTGCGGGCGGGGGCGTGGGACC CGCACAACGCCAACGCAGTGGCGGTGGCGGTGGGCTGCGATGTCCGCTTC TGGGACCTCCGCTCCATGAAGCAGAGCCACCAGGTGAGTGGTGGTGTCAT TCCTCTTGCTTGCGCCGAAATGGTCCCACCTTTTTTGTAACTGCATCCTT TGGCGGGGATTTAGAGGAGAAGCCTTTTCTGCGGTGGTATTCTTGTGAAA CTAACGTGCTGTGACTTATCGGGATTTAGCACTTTTGCTGATTTTCGCTG CTTTGCCAGCTAATTAACTTCTCAACCCTGCCTGTTTCGCGTTCTCTTCT CTCAGGAGTCTCCCAGACCTTTCTCCTGCAGCCTCAGCACCCGCTTTTTT GAGCGTTCTTGTGGGTATAACATTTGCTGTCAGTACAATGGCCAATTGCT AGCTCGTTCTAATAATTTATCCGTCCTCTTCTTCATCTTCTTCTTTCGAC GCGACAAAACAGGTGTCAGGGGCCCACAGCTACGGCGTGCGCGACGTGGA CTACAACCCCCACAAGCCGCACACCCTCGCCACGTGCGGTGAGGACCGCC TCCTACGATTCTGGGACCTCCGAAAGCCGGTGAGGCAAGCAGGAGAAAGT CTAGTGCGTCCGCAGGCAGCAGGCAGCAAGCTGGGAACAACAGCCGAATT TGTCTGCACTGAAACTGCCGGATCTGTCTGCTTTGAAACTGCCAGATCTG TTCCTCGTCTCGTCGCGAGAAGGAGCGTGTGCACGAGTTCCTCCGGCCTT CAGTTTCAGCAGCAGTGAACAGTGACTGGACTCTGGCGCTTCATCCTGGG GTGGTACGGTCATCGTGGCAGCTGAGTCAAGCCTGTGCTTAATTTTCCCC TTCCTTCTGTGCGGCAGGAGAAGCCGCTGCGGTCGGTGCTTGCTCACACG CACTGGGCGTGGACAGTGCGCTACAACAAGTTCCACGACCAACTCCTCCT TTCCGGTGCGCAAGGAAAAGAGGAAACGAAGGAGACAGAATGAATCTTTA TCACGATTGCACTCCAGCAGTCGCGGAAAAGTCAGTCACTGACCTCCCTT TACTCTCCACTAGCAGCCGCAAGCGACTGCGGTTGAAACAGTTTCGGAGA AAGCAGTTTCTGAGGACATGAATGCTTCTCGCGTTTCCCAACATCCCTGC CATTCCTCAGTTCTTCCTCTTTATTGTTCGGACTAACATCTTGTCTGGAC TTGGACTTCTCTGCCCTTCCGCGGCCCCGTCAACTCTGCAGGCGGTTCTG ACGGCATGGTTAACCTGTGGCGAATCAGCTCCATCTCCTCTGCCCCGCTT CTCGAGCTCGAAGACGGCGATATCGATGTTGGTGGCGGCGCCGGCCACCA CGGCGCCGGCGGAAGCGGCGGCGGGAACATGGGCCGCTCACGCCTGGGCG GACGAGCAGAATCGGCCGACATCAAGGTAAGCGGCGTCGTTGGACTGGCG CTGTCTTTTCCTGAATCAGAAGATGCCCTGTTCTGTTTCCTTTCCTCGGG TGCGCTCTTTTTTGTTTTCTCCTTCTGATCCTCGTTCGACTTAACTCCAT TCCCTGTTGCTTTGCATTTGGGCTAACGGCGGCTGATGGCGGCGGCCGTG TCCTCGGCGGCATCGGCGGCGGCGGCGGCTGTTACAACGGCGGCGGTGCC AACGGCGGCACTGGCGGCGGCCGGCGGTTGCTGTAGGTGCGGTCGTTTGA AGGCCACGAGGAGAGCGTGTACTCAGTGGCGTGGAGCGCGCGCGACCCGT GGCTCTTCGCGTCGCTGTCATACGACGGACGTATCACAGTCGACCACGTT CCTTCCACCGAAAAGTACAAAATTTTGCTATAAACGGGCTAGAGACGCTT GTTAATAGAAATTGGCATTTCGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig734:3073..5996-

>mRNA_P-wetherbeei_contig734.4.2 ID=mRNA_P-wetherbeei_contig734.4.2|Name=mRNA_P-wetherbeei_contig734.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1359bp|location=Sequence derived from alignment at P-wetherbeei_contig734:3073..5996- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCGTTAACACTTCAGCAGTGTACGGCCTGAAGTTGCCCTGCCGCTG
CATCGCGGCCATGGGAACGGGAGCCGAAAGCGCGAAAAACGACGATGTGG
GCGGAGCGGGCGAAGGCGGGGAGCCTCATCTCTTCCTCGTAGGGACAACC
GCACTAAGGGAAGGCGCTTCGAACGAACTGCATCGTTTGGCCTTTCAGGA
GGACACCAACGAGATCATATGCGAGCAGGCCTTCTCGCATCCTGGCGAAA
TATGGGCGCTGGCGCCGAGCCGGCGGGACCCGAGCCTCCTCTTCACCTGC
GCCAACGTAGCGGGCGGCGGCGGCACCGGCGAGGGCGTCGGCTCCTGCCT
CACCCGTCTCTGGCGGATGCCCGAGGACACTGACAACGGGGATGGCGGCG
GAGGCGGCGGCGGCGGCGGTACCACGCTCAGCCCGCGAGGTCGCGGTTAC
AGCGTCTATGGAGGCGGCGCAGGCGGCGGCGACAGCGGCGACGGCCTCAA
GCAGCTCGAGCTCAAGATGGAGCTGTGTGACAGTGCCAAGCCCCTGCGCG
CTGTCCTCTGGAGCCCTCACGGCGGCGACGACGCCGTCACCATCGGCAGC
GACCGCCTCAAGAACTGGTCACTGACCGCGGCCGCCGCCACTGCGACGGG
CGCTGGCGGCGGCGCACCGACGCAGGCGTCAATGAAGGGGTCGGCGGCAG
TGAGCAGCGACCACTCGGTGCGGGCGGGGGCGTGGGACCCGCACAACGCC
AACGCAGTGGCGGTGGCGGTGGGCTGCGATGTCCGCTTCTGGGACCTCCG
CTCCATGAAGCAGAGCCACCAGGTGTCAGGGGCCCACAGCTACGGCGTGC
GCGACGTGGACTACAACCCCCACAAGCCGCACACCCTCGCCACGTGCGGT
GAGGACCGCCTCCTACGATTCTGGGACCTCCGAAAGCCGGAGAAGCCGCT
GCGGTCGGTGCTTGCTCACACGCACTGGGCGTGGACAGTGCGCTACAACA
AGTTCCACGACCAACTCCTCCTTTCCGGCGGTTCTGACGGCATGGTTAAC
CTGTGGCGAATCAGCTCCATCTCCTCTGCCCCGCTTCTCGAGCTCGAAGA
CGGCGATATCGATGTTGGTGGCGGCGCCGGCCACCACGGCGCCGGCGGAA
GCGGCGGCGGGAACATGGGCCGCTCACGCCTGGGCGGACGAGCAGAATCG
GCCGACATCAAGGTGCGGTCGTTTGAAGGCCACGAGGAGAGCGTGTACTC
AGTGGCGTGGAGCGCGCGCGACCCGTGGCTCTTCGCGTCGCTGTCATACG
ACGGACGTATCACAGTCGACCACGTTCCTTCCACCGAAAAGTACAAAATT
TTGCTATAA
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