mRNA_P-wetherbeei_contig734.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig734.2.1
Unique NamemRNA_P-wetherbeei_contig734.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: D7FTR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 3.100e-87
Identity = 144/257 (56.03%), Postives = 185/257 (71.98%), Query Frame = 2
Query:  176 MSFPKGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPA--RGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
            M FP G KP  + ++  P+L++YDHCP+CVR RM+FGLK + H+L +L+ND+++ PT+++GKK VPILEL RPG  DHE +M ES+DIVKR+DLDP FGPPVLA   PA  R DL+ W+S  A +MRRL RPRNA +  L EFQ +SAREAFVRNHP+  P+ YE NL  +P L  +LE  L +LE +IH P +V             G +SY+D+ FF RMR +TIV+ L IPP+LRAYLDA+SER D+PLYD IA
Sbjct:    1 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHE-IMAESMDIVKRLDLDPQFGPPVLA---PAVDRKDLDGWVSSAAMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAAD----------GKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIA 242          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A6H5J619_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 5.680e-87
Identity = 147/263 (55.89%), Postives = 187/263 (71.10%), Query Frame = 2
Query:  158 ASRALAMSFPKGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPA--RGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
            A   +AM FP G KP  + E+  P+L++YDHCP+CVR RM+FGLK + H+L +L+ND+++ PT+++GKK VPILEL RPG  DHE +M ES+DIVKR+DLDP FGPPVLA   PA  R DL+ W+S    +MRRL RPRNA +  L EFQ +SAREAFVRNHP+  P+ YE NL  +P L  +LE  L +LE +IH P +V             G +SY+DI FF RMR +TIV+ L IPP+LRAYLDA+SER D+PLYD IA
Sbjct:   66 AQDKVAMPFPTGSKPVKEIESPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSDDHE-IMAESMDIVKRLDLDPQFGPPVLA---PAVDRKDLDSWVSSAGMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAAD----------GKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIA 313          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: W7TQ45_9STRA (Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA)

HSP 1 Score: 224 bits (572), Expect = 7.650e-67
Identity = 124/248 (50.00%), Postives = 159/248 (64.11%), Query Frame = 2
Query:  188 KGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPI-APPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLY 928
            +G K    Q    P LY+YDHCPFCVRAR+IFGLK + H+L FL ND+ D PT+L+GKK VPILE+          VM ES+DIVK +D DP +GPPVL   S  R D++ +    AD+ RR TRPR A SS+LPEF   +AR AFVRNHP  +PP DY ENL N  +L A L A L EL+ ++   + VT            GGVSYDD+  F ++R +T+V  L +PPRL+AY++A  E+ +IPLY
Sbjct:   40 RGLKMMSTQLDKRPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEMIDAQ--GERVVMPESMDIVKLIDEDPRWGPPVLRRGSD-REDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQNK-SLVADLSARLRELDAMLFSDECVTE-----------GGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPLY 272          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A7S2XXQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.080e-65
Identity = 110/232 (47.41%), Postives = 157/232 (67.67%), Query Frame = 2
Query:  212 QETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSE 907
            ++  LP+LY+YDHCPFCVRARMIFGLK+++H L F+++D+ D P  L+GKK  PILE+      D  +VM ES+DIV R+D DP +G P+L G+   R DL +WM    D+ RR    R+     LPEFQF+SARE F++ HP+A P+DY EN  N+ AL  ++   LLEL+ +I  P+  T            GG+SYDDI+ F ++RSVT++R ++IPP+++AY+++MSE
Sbjct:   69 KKNYLPQLYIYDHCPFCVRARMIFGLKSIKHNLVFMSSDDWDTPEGLVGKKVAPILEIKHEDGKD--EVMPESMDIVWRIDNDPKYGQPLLKGKPELREDLAQWMKDTRDLFRRALHTRHVMVP-LPEFQFRSAREVFIQRHPLAEPSDYNENYYNS-ALVEEMNQKLLELDAMIFSPECCTD-----------GGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A7S0M661_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M661_9CRYP)

HSP 1 Score: 221 bits (563), Expect = 1.780e-65
Identity = 121/258 (46.90%), Postives = 156/258 (60.47%), Query Frame = 2
Query:  218 TVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPAD-----------------YEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
            T +PRLYVYDHCPFCVR R I G KN++H + FLAND+++ PT L+GKK VPILE+     P + +VMKES+DIVKR+D DP FGP +L   S  R DL EW  ++ D+ R L RPR   S ILPEF  ++ R+A+VRNH + P A                  Y E L  TPAL     AA+ EL  +I      +            GG+SYDD+  F R+RS+TIVR L +P  +RAYL++M+   D+PLYD IA
Sbjct:   38 TPVPRLYVYDHCPFCVRVRFIMGFKNIKHNVVFLANDDIETPTKLVGKKVVPILEI-----PSYGEVMKESMDIVKRIDEDPTFGPQLLKPAS-GRKDLSEWQDKHQDLFRLLQRPRYVSSGILPEFSQQAGRDAYVRNHALPPYAKEEWSDDKRLPRAMRYAKYAEALQQTPALLPAAAAAVQELGGMIASAQHCSE-----------GGLSYDDVDLFGRLRSLTIVRGLPLPDTVRAYLESMAAAADVPLYDPIA 278          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A0G4H2N0_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H2N0_9ALVE)

HSP 1 Score: 218 bits (554), Expect = 4.660e-64
Identity = 119/241 (49.38%), Postives = 150/241 (62.24%), Query Frame = 2
Query:  224 LPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGP--PVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
            LP+LYVYDHCPFCVRAR+IFGLK ++HEL +LANDEVDIPT L+GKK VPIL    P  P     M ES+DIV+RVD D   G   PVL  E+ A  +    M+      RRLTRPR A S++LPEF F +AR  +   HP+  P+ Y+EN   +     QLE AL +L+PL+H  +               GG SY D+  F R+R  TIV+ ++ P R+RAY+D  SE+ DIPLYD IA
Sbjct:   56 LPQLYVYDHCPFCVRARIIFGLKKIKHELIWLANDEVDIPTRLVGKKMVPILVWTDPQDPQKITAMPESMDIVRRVDGDAKMGAGGPVLK-ETGASEEFISAMNEVTAASRRLTRPRFAGSALLPEFSFDAARRTYTERHPLDAPSSYDENFKRSSEYIPQLEKALQKLDPLLHSEEEAVE-----------GGPSYTDVDLFPRLRGCTIVKGVKWPQRVRAYVDKWSEKTDIPLYDRIA 284          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A6V1VKR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK)

HSP 1 Score: 216 bits (551), Expect = 2.920e-63
Identity = 116/282 (41.13%), Postives = 165/282 (58.51%), Query Frame = 2
Query:  107 TPSTALHIAFQHPGAPSASRALAMS-FPKGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRP--GHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIAI 943
            TP  +    F  P A   S  L  S    G      +   LPR+++YDHCP+C R R+I GLKN++HEL ++AND+ D P SL+GKK  PI E      GH    +VM ESLDI+ R+D DP +GPP+L   S  R D   W++ N  +  RL  PR ARS ++PEF F+ ARE +V+ HP+  P+DY+   A +P    ++   LLELEP+I   +  T            GG+S DD+  F+R+R +T+VR L  PP+++AY++ MS++  +PLY  +AI
Sbjct:   47 TPKLSNDAKFLEPSAQRPSTILGTSPISGGSDRLAIKPQALPRVFLYDHCPYCTRVRIILGLKNIKHELVWMANDDFDTPISLVGKKMAPIFEYNSEERGH----EVMAESLDIIARLDSDPKWGPPLLRPASD-RTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTA-----------GGLSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPLYYQLAI 312          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A5J4YKV5_PORPP (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP)

HSP 1 Score: 213 bits (542), Expect = 8.760e-63
Identity = 110/241 (45.64%), Postives = 153/241 (63.49%), Query Frame = 2
Query:  221 VLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIAI 943
            VLPRLY+Y HCPFCVR +   GLKN++HEL FLAND+V  PT+L+GKK VPILE+ RPG P HE +M ESLDI+KR+D DPAFGP  L   +  R D++ W+  + ++ RRL  PR  R   LPEF F  AR A++RNH I  P DY+ N A +  L  Q+ A + +L+ L+      +            GGVS DD+  F+R+RS+ +++    PP+++AY+D   +  DIP +  +A+
Sbjct:   20 VLPRLYLYAHCPFCVRVQTALGLKNIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHE-LMNESLDIIKRIDEDPAFGPTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVP-LPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQHCSE-----------GGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIPSFAPMAL 247          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A813EIR4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EIR4_POLGL)

HSP 1 Score: 215 bits (548), Expect = 1.190e-62
Identity = 122/260 (46.92%), Postives = 165/260 (63.46%), Query Frame = 2
Query:  224 LPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPAD--------------------YEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIAI 943
            LP LY+YDHCPFCVRAR+IFG+KN++H L ++AND+VD PT+L+GKK  PIL+L  PG    E  M ESLDIV+++D+DPA+GPP+L   S AR DL+    R  + +R L RPR  R+  LPEF  K  R A++RNHPIA P                      Y+ +  N+PAL A+L + L + E LIH  D+V       SPGG     SYDDI FFA+MR+ ++++ L+  PRL+AY++ MS+   IPLY  +A+
Sbjct:   85 LPELYIYDHCPFCVRARIIFGMKNIKHNLVWMANDDVDTPTALVGKKISPILQL--PG----ESAMFESLDIVRKIDMDPAWGPPLLKPAS-AREDLDAVDKRTIEAVRLLLRPRVIRA-YLPEFAHKDGRTAYLRNHPIADPVGGEVPEKAAWLAMGEEKWKSWYDAHFENSPALLAELNSVLPDFEGLIHSEDSV-------SPGG----ASYDDIVFFAKMRTASLIKGLKPGPRLQAYMERMSDLSQIPLYSGMAV 325          
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A0G4EFM6_VITBC (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC)

HSP 1 Score: 210 bits (535), Expect = 1.410e-60
Identity = 113/241 (46.89%), Postives = 153/241 (63.49%), Query Frame = 2
Query:  224 LPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGP--PVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
            LPRLYVYDHCPFCVRARMIFGLKN++H+L ++AND+++ PT LIGKK  PILE+ R   P    +M ESLDIVK +D     G   P+L   S  R DL+EW+   A+  RRL+RPR A S+ LPEF F SAR  ++  HP+  P+ YEEN   +    A L   L +L+ +I  P                GG+SYDDI  F R+R+++IV+ LE PP ++AY++ +S++ D+ LY  +A
Sbjct:  107 LPRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEV-RGRRPGEGLIMPESLDIVKYIDESEEIGAGLPLLKPFS-GRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISE---------GGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVALYTKMA 336          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTR2_ECTSI3.100e-8756.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J619_9PHAE5.680e-8755.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TQ45_9STRA7.650e-6750.00Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=42507... [more]
A0A7S2XXQ8_9STRA1.080e-6547.41Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0M661_9CRYP1.780e-6546.90Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A0G4H2N0_9ALVE4.660e-6449.38Uncharacterized protein n=2 Tax=Chromera velia CCM... [more]
A0A6V1VKR3_HETAK2.920e-6341.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4YKV5_PORPP8.760e-6345.64Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxI... [more]
A0A813EIR4_POLGL1.190e-6246.92Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A0G4EFM6_VITBC1.410e-6046.89GST N-terminal domain-containing protein n=1 Tax=V... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig734contigP-wetherbeei_contig734:1106..3073 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTR2
PFAMsGST_N_3,Glutaredoxin2_C
Model size1402
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons3
Evalue4.5e-90
EggNOG OGsCOG2999@1|root,2RYF1@2759|Eukaryota
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-14_001150.1
DescriptionGlutaredoxin 2, C terminal domain
Cds size936
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186973.6712673-UTR-P-wetherbeei_contig734:1105..11151683186973.6712673-UTR-P-wetherbeei_contig734:1105..1115Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig734 1106..1115 +
1683186973.7156496-UTR-P-wetherbeei_contig734:2617..30731683186973.7156496-UTR-P-wetherbeei_contig734:2617..3073Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig734 2618..3073 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186973.6829226-CDS-P-wetherbeei_contig734:1115..15171683186973.6829226-CDS-P-wetherbeei_contig734:1115..1517Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 1116..1517 +
1683186973.6928673-CDS-P-wetherbeei_contig734:1764..19531683186973.6928673-CDS-P-wetherbeei_contig734:1764..1953Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 1765..1953 +
1683186973.7047005-CDS-P-wetherbeei_contig734:2272..26171683186973.7047005-CDS-P-wetherbeei_contig734:2272..2617Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig734 2273..2617 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig734.2.1prot_P-wetherbeei_contig734.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig734 1116..2617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig734.2.1

>prot_P-wetherbeei_contig734.2.1 ID=prot_P-wetherbeei_contig734.2.1|Name=mRNA_P-wetherbeei_contig734.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp
MRARRVCALLPLFGSGEAFHTNGASPRGLAGNTPSTALHIAFQHPGAPSA
SRALAMSFPKGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHEL
FFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLD
PAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKS
AREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTG
PDAITSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSER
CDIPLYDLIAI*
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mRNA from alignment at P-wetherbeei_contig734:1106..3073+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig734.2.1 ID=mRNA_P-wetherbeei_contig734.2.1|Name=mRNA_P-wetherbeei_contig734.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1968bp|location=Sequence derived from alignment at P-wetherbeei_contig734:1106..3073+ (Phaeothamnion wetherbeei SAG_119_79)
CGCAGAAATCATGCGTGCTCGACGGGTTTGCGCTCTTCTCCCTTTGTTTG GCAGCGGCGAGGCATTCCACACAAACGGAGCAAGTCCAAGAGGTCTGGCG GGCAACACTCCTTCCACAGCTCTGCACATCGCGTTTCAGCATCCAGGCGC TCCCTCTGCGTCTAGAGCGCTGGCAATGTCTTTTCCCAAGGGACACAAAC CTTTTATAGACCAAGAGACCGTCCTTCCGCGGTTGTACGTGTACGATCAC TGTCCATTCTGCGTGCGAGCAAGGATGATCTTTGGGCTCAAAAACCTCAG ACACGAATTGTTCTTCTTAGCAAACGATGAGGTAGACATTCCAACGAGCT TGATTGGCAAGAAGGCGGTGCCGATTCTGGAGCTGTGCCGCCCTGGTCAC CCCGACCACGAGGTGAGTGAATTGGCAACGAGAGAGAGACTTATGATAGA TTTTACTGTTTTTTGCTTTTGCTGTGACTAGCCGTCTATGCCTTCCATCT GGATGTTTTCGAGCGTGGACTTGCGAGATATCTGAAGTTATATATGGCGG GGTAGGTGAACCTACGTCAGGAGTGCATCATGAGCAAAGGCAAGCGGGCG TCGTGTTGCACAACAATCGCCCGCATGACTTAAAATGGCCAAATCGTTCT CTTGAAGAGCAGGTGATGAAAGAGTCGTTGGACATCGTGAAGCGCGTCGA CCTGGACCCGGCTTTCGGCCCGCCGGTGCTGGCTGGCGAGTCGCCAGCCC GCGGCGACCTCGAGGAGTGGATGAGCAGAAACGCCGATGTCATGCGGCGG CTGACGCGACCGCGGAACGCGCGCAGCTCCATCCTTCCGGAATTCCAGGT CAGTCGTTCGGCCTGTTTGATGGTTAGTCTCTTTGCTGCCAAGATAGTGA GAGACCACTGCCGAAGGCGGACCTCGTGGAAAATGGCGGTGGAGGCCATT GCGGTTGGTAAACGACAGTTTGGGTAACAGCTGTGGTAATAGTAGCCGTA TGAACTCTCTTGGGTTCGCTCCAGTGCAATGCAGCAGCCCATCTTTGAAG CATCGTTTGTGAACGACTGACTGACTGCTTGCGACCAATCATAAGATCTA TCACCCAACCCGCCGCCTAACGCATGAGTATCGCCGGTAATCACTTCCCC GATTCGTCCATGACCAGTTCAAGTCTGCCAGAGAGGCCTTCGTTCGGAAC CACCCGATCGCGCCCCCTGCCGACTACGAGGAGAACCTCGCTAACACACC CGCCCTCAAGGCGCAGCTCGAGGCGGCGCTGCTGGAGCTGGAGCCGCTCA TTCACGGCCCCGACGCCGTCACTGGCCCAGACGCCATTACCAGCCCCGGT GGCGGCGGCGGCGGCGTGAGCTACGACGACATCAGCTTCTTTGCGCGGAT GCGGAGCGTGACCATCGTGCGGGACCTGGAAATCCCGCCGCGGCTGAGGG CGTACCTCGATGCCATGAGCGAGCGGTGCGATATTCCGCTCTATGACCTC ATCGCCATCTAGAGCCAGCTTGTGTTGGCGGCAAGCCCTGTTGGCCGGAG GGGCGGTGAGGAATGCGAAATGCGTGTCGTAAAGGCTTCCTGATGCAGGT AAATAGAAAGGCTGGCTGCATAGATTGTGAAGGGGAGGCTGTTAAAAGAG CACGTGTCTGTGTGTCGGAGGCAGCAAGTTTCGTGAACGAAGCAAGGGGA AGTACATCATTGTTCCTATCTATTCAAATACACTTTCCTTTGCGGGTGCC AGTCCCAATTGGGAAGGAGCGGGACTGGCTTACAGCCGGAAACGCAATTG ACCTGTCGAAGCGGCTCTCTTTGCGCGGCATACCAACTACGGCGCGGGTA TTGGTAATTTGCTCGCAACAACAAACACCACTGCACGCACGCTGCCGCAG ACGGCATTTTCGAACCGATAACAGTATCTGTGGAAGCAAGTCGCTCCCAA CTTAAGGGCAAGGTTGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig734:1106..3073+

>mRNA_P-wetherbeei_contig734.2.1 ID=mRNA_P-wetherbeei_contig734.2.1|Name=mRNA_P-wetherbeei_contig734.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig734:1106..3073+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGTGCTCGACGGGTTTGCGCTCTTCTCCCTTTGTTTGGCAGCGGCGA
GGCATTCCACACAAACGGAGCAAGTCCAAGAGGTCTGGCGGGCAACACTC
CTTCCACAGCTCTGCACATCGCGTTTCAGCATCCAGGCGCTCCCTCTGCG
TCTAGAGCGCTGGCAATGTCTTTTCCCAAGGGACACAAACCTTTTATAGA
CCAAGAGACCGTCCTTCCGCGGTTGTACGTGTACGATCACTGTCCATTCT
GCGTGCGAGCAAGGATGATCTTTGGGCTCAAAAACCTCAGACACGAATTG
TTCTTCTTAGCAAACGATGAGGTAGACATTCCAACGAGCTTGATTGGCAA
GAAGGCGGTGCCGATTCTGGAGCTGTGCCGCCCTGGTCACCCCGACCACG
AGCAGGTGATGAAAGAGTCGTTGGACATCGTGAAGCGCGTCGACCTGGAC
CCGGCTTTCGGCCCGCCGGTGCTGGCTGGCGAGTCGCCAGCCCGCGGCGA
CCTCGAGGAGTGGATGAGCAGAAACGCCGATGTCATGCGGCGGCTGACGC
GACCGCGGAACGCGCGCAGCTCCATCCTTCCGGAATTCCAGTTCAAGTCT
GCCAGAGAGGCCTTCGTTCGGAACCACCCGATCGCGCCCCCTGCCGACTA
CGAGGAGAACCTCGCTAACACACCCGCCCTCAAGGCGCAGCTCGAGGCGG
CGCTGCTGGAGCTGGAGCCGCTCATTCACGGCCCCGACGCCGTCACTGGC
CCAGACGCCATTACCAGCCCCGGTGGCGGCGGCGGCGGCGTGAGCTACGA
CGACATCAGCTTCTTTGCGCGGATGCGGAGCGTGACCATCGTGCGGGACC
TGGAAATCCCGCCGCGGCTGAGGGCGTACCTCGATGCCATGAGCGAGCGG
TGCGATATTCCGCTCTATGACCTCATCGCCATCTAG
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