mRNA_P-wetherbeei_contig734.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: D7FTR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI) HSP 1 Score: 276 bits (705), Expect = 3.100e-87 Identity = 144/257 (56.03%), Postives = 185/257 (71.98%), Query Frame = 2
Query: 176 MSFPKGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPA--RGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
M FP G KP + ++ P+L++YDHCP+CVR RM+FGLK + H+L +L+ND+++ PT+++GKK VPILEL RPG DHE +M ES+DIVKR+DLDP FGPPVLA PA R DL+ W+S A +MRRL RPRNA + L EFQ +SAREAFVRNHP+ P+ YE NL +P L +LE L +LE +IH P +V G +SY+D+ FF RMR +TIV+ L IPP+LRAYLDA+SER D+PLYD IA
Sbjct: 1 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHE-IMAESMDIVKRLDLDPQFGPPVLA---PAVDRKDLDGWVSSAAMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAAD----------GKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIA 242
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A6H5J619_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE) HSP 1 Score: 278 bits (710), Expect = 5.680e-87 Identity = 147/263 (55.89%), Postives = 187/263 (71.10%), Query Frame = 2
Query: 158 ASRALAMSFPKGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPA--RGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
A +AM FP G KP + E+ P+L++YDHCP+CVR RM+FGLK + H+L +L+ND+++ PT+++GKK VPILEL RPG DHE +M ES+DIVKR+DLDP FGPPVLA PA R DL+ W+S +MRRL RPRNA + L EFQ +SAREAFVRNHP+ P+ YE NL +P L +LE L +LE +IH P +V G +SY+DI FF RMR +TIV+ L IPP+LRAYLDA+SER D+PLYD IA
Sbjct: 66 AQDKVAMPFPTGSKPVKEIESPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSDDHE-IMAESMDIVKRLDLDPQFGPPVLA---PAVDRKDLDSWVSSAGMLMRRLVRPRNAVTP-LAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAAD----------GKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIA 313
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: W7TQ45_9STRA (Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA) HSP 1 Score: 224 bits (572), Expect = 7.650e-67 Identity = 124/248 (50.00%), Postives = 159/248 (64.11%), Query Frame = 2
Query: 188 KGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPI-APPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLY 928
+G K Q P LY+YDHCPFCVRAR+IFGLK + H+L FL ND+ D PT+L+GKK VPILE+ VM ES+DIVK +D DP +GPPVL S R D++ + AD+ RR TRPR A SS+LPEF +AR AFVRNHP +PP DY ENL N +L A L A L EL+ ++ + VT GGVSYDD+ F ++R +T+V L +PPRL+AY++A E+ +IPLY
Sbjct: 40 RGLKMMSTQLDKRPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEMIDAQ--GERVVMPESMDIVKLIDEDPRWGPPVLRRGSD-REDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQNK-SLVADLSARLRELDAMLFSDECVTE-----------GGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPLY 272
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A7S2XXQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA) HSP 1 Score: 222 bits (565), Expect = 1.080e-65 Identity = 110/232 (47.41%), Postives = 157/232 (67.67%), Query Frame = 2
Query: 212 QETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSE 907
++ LP+LY+YDHCPFCVRARMIFGLK+++H L F+++D+ D P L+GKK PILE+ D +VM ES+DIV R+D DP +G P+L G+ R DL +WM D+ RR R+ LPEFQF+SARE F++ HP+A P+DY EN N+ AL ++ LLEL+ +I P+ T GG+SYDDI+ F ++RSVT++R ++IPP+++AY+++MSE
Sbjct: 69 KKNYLPQLYIYDHCPFCVRARMIFGLKSIKHNLVFMSSDDWDTPEGLVGKKVAPILEIKHEDGKD--EVMPESMDIVWRIDNDPKYGQPLLKGKPELREDLAQWMKDTRDLFRRALHTRHVMVP-LPEFQFRSAREVFIQRHPLAEPSDYNENYYNS-ALVEEMNQKLLELDAMIFSPECCTD-----------GGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A7S0M661_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M661_9CRYP) HSP 1 Score: 221 bits (563), Expect = 1.780e-65 Identity = 121/258 (46.90%), Postives = 156/258 (60.47%), Query Frame = 2
Query: 218 TVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPAD-----------------YEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
T +PRLYVYDHCPFCVR R I G KN++H + FLAND+++ PT L+GKK VPILE+ P + +VMKES+DIVKR+D DP FGP +L S R DL EW ++ D+ R L RPR S ILPEF ++ R+A+VRNH + P A Y E L TPAL AA+ EL +I + GG+SYDD+ F R+RS+TIVR L +P +RAYL++M+ D+PLYD IA
Sbjct: 38 TPVPRLYVYDHCPFCVRVRFIMGFKNIKHNVVFLANDDIETPTKLVGKKVVPILEI-----PSYGEVMKESMDIVKRIDEDPTFGPQLLKPAS-GRKDLSEWQDKHQDLFRLLQRPRYVSSGILPEFSQQAGRDAYVRNHALPPYAKEEWSDDKRLPRAMRYAKYAEALQQTPALLPAAAAAVQELGGMIASAQHCSE-----------GGLSYDDVDLFGRLRSLTIVRGLPLPDTVRAYLESMAAAADVPLYDPIA 278
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A0G4H2N0_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H2N0_9ALVE) HSP 1 Score: 218 bits (554), Expect = 4.660e-64 Identity = 119/241 (49.38%), Postives = 150/241 (62.24%), Query Frame = 2
Query: 224 LPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGP--PVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
LP+LYVYDHCPFCVRAR+IFGLK ++HEL +LANDEVDIPT L+GKK VPIL P P M ES+DIV+RVD D G PVL E+ A + M+ RRLTRPR A S++LPEF F +AR + HP+ P+ Y+EN + QLE AL +L+PL+H + GG SY D+ F R+R TIV+ ++ P R+RAY+D SE+ DIPLYD IA
Sbjct: 56 LPQLYVYDHCPFCVRARIIFGLKKIKHELIWLANDEVDIPTRLVGKKMVPILVWTDPQDPQKITAMPESMDIVRRVDGDAKMGAGGPVLK-ETGASEEFISAMNEVTAASRRLTRPRFAGSALLPEFSFDAARRTYTERHPLDAPSSYDENFKRSSEYIPQLEKALQKLDPLLHSEEEAVE-----------GGPSYTDVDLFPRLRGCTIVKGVKWPQRVRAYVDKWSEKTDIPLYDRIA 284
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A6V1VKR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK) HSP 1 Score: 216 bits (551), Expect = 2.920e-63 Identity = 116/282 (41.13%), Postives = 165/282 (58.51%), Query Frame = 2
Query: 107 TPSTALHIAFQHPGAPSASRALAMS-FPKGHKPFIDQETVLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRP--GHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIAI 943
TP + F P A S L S G + LPR+++YDHCP+C R R+I GLKN++HEL ++AND+ D P SL+GKK PI E GH +VM ESLDI+ R+D DP +GPP+L S R D W++ N + RL PR ARS ++PEF F+ ARE +V+ HP+ P+DY+ A +P ++ LLELEP+I + T GG+S DD+ F+R+R +T+VR L PP+++AY++ MS++ +PLY +AI
Sbjct: 47 TPKLSNDAKFLEPSAQRPSTILGTSPISGGSDRLAIKPQALPRVFLYDHCPYCTRVRIILGLKNIKHELVWMANDDFDTPISLVGKKMAPIFEYNSEERGH----EVMAESLDIIARLDSDPKWGPPLLRPASD-RTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTA-----------GGLSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPLYYQLAI 312
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A5J4YKV5_PORPP (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP) HSP 1 Score: 213 bits (542), Expect = 8.760e-63 Identity = 110/241 (45.64%), Postives = 153/241 (63.49%), Query Frame = 2
Query: 221 VLPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIAI 943
VLPRLY+Y HCPFCVR + GLKN++HEL FLAND+V PT+L+GKK VPILE+ RPG P HE +M ESLDI+KR+D DPAFGP L + R D++ W+ + ++ RRL PR R LPEF F AR A++RNH I P DY+ N A + L Q+ A + +L+ L+ + GGVS DD+ F+R+RS+ +++ PP+++AY+D + DIP + +A+
Sbjct: 20 VLPRLYLYAHCPFCVRVQTALGLKNIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHE-LMNESLDIIKRIDEDPAFGPTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVP-LPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQHCSE-----------GGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIPSFAPMAL 247
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A813EIR4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EIR4_POLGL) HSP 1 Score: 215 bits (548), Expect = 1.190e-62 Identity = 122/260 (46.92%), Postives = 165/260 (63.46%), Query Frame = 2
Query: 224 LPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGPPVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPAD--------------------YEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIAI 943
LP LY+YDHCPFCVRAR+IFG+KN++H L ++AND+VD PT+L+GKK PIL+L PG E M ESLDIV+++D+DPA+GPP+L S AR DL+ R + +R L RPR R+ LPEF K R A++RNHPIA P Y+ + N+PAL A+L + L + E LIH D+V SPGG SYDDI FFA+MR+ ++++ L+ PRL+AY++ MS+ IPLY +A+
Sbjct: 85 LPELYIYDHCPFCVRARIIFGMKNIKHNLVWMANDDVDTPTALVGKKISPILQL--PG----ESAMFESLDIVRKIDMDPAWGPPLLKPAS-AREDLDAVDKRTIEAVRLLLRPRVIRA-YLPEFAHKDGRTAYLRNHPIADPVGGEVPEKAAWLAMGEEKWKSWYDAHFENSPALLAELNSVLPDFEGLIHSEDSV-------SPGG----ASYDDIVFFAKMRTASLIKGLKPGPRLQAYMERMSDLSQIPLYSGMAV 325
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Match: A0A0G4EFM6_VITBC (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC) HSP 1 Score: 210 bits (535), Expect = 1.410e-60 Identity = 113/241 (46.89%), Postives = 153/241 (63.49%), Query Frame = 2
Query: 224 LPRLYVYDHCPFCVRARMIFGLKNLRHELFFLANDEVDIPTSLIGKKAVPILELCRPGHPDHEQVMKESLDIVKRVDLDPAFGP--PVLAGESPARGDLEEWMSRNADVMRRLTRPRNARSSILPEFQFKSAREAFVRNHPIAPPADYEENLANTPALKAQLEAALLELEPLIHGPDAVTXXXXXXSPGGGGGGVSYDDISFFARMRSVTIVRDLEIPPRLRAYLDAMSERCDIPLYDLIA 940
LPRLYVYDHCPFCVRARMIFGLKN++H+L ++AND+++ PT LIGKK PILE+ R P +M ESLDIVK +D G P+L S R DL+EW+ A+ RRL+RPR A S+ LPEF F SAR ++ HP+ P+ YEEN + A L L +L+ +I P GG+SYDDI F R+R+++IV+ LE PP ++AY++ +S++ D+ LY +A
Sbjct: 107 LPRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEV-RGRRPGEGLIMPESLDIVKYIDESEEIGAGLPLLKPFS-GRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISE---------GGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVALYTKMA 336 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig734.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig734.2.1 >prot_P-wetherbeei_contig734.2.1 ID=prot_P-wetherbeei_contig734.2.1|Name=mRNA_P-wetherbeei_contig734.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp MRARRVCALLPLFGSGEAFHTNGASPRGLAGNTPSTALHIAFQHPGAPSAback to top mRNA from alignment at P-wetherbeei_contig734:1106..3073+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig734.2.1 ID=mRNA_P-wetherbeei_contig734.2.1|Name=mRNA_P-wetherbeei_contig734.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1968bp|location=Sequence derived from alignment at P-wetherbeei_contig734:1106..3073+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig734:1106..3073+ >mRNA_P-wetherbeei_contig734.2.1 ID=mRNA_P-wetherbeei_contig734.2.1|Name=mRNA_P-wetherbeei_contig734.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig734:1106..3073+ (Phaeothamnion wetherbeei SAG_119_79)back to top |