mRNA_P-wetherbeei_contig7323.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7323.2.1
Unique NamemRNA_P-wetherbeei_contig7323.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A835YNH1_9STRA (FAD synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH1_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.760e-85
Identity = 128/210 (60.95%), Postives = 164/210 (78.10%), Query Frame = 2
Query:  419 LVQQSMDTIRRALDTFSPSGLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYFEKQEFSAIMEFLETIKEKYGITLRRYHSSYKEGMQDLV-SHGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYR 1045
            +V  S+D +R+ALD ++P GLA+SFNGGKDAC VLFLLM VLAERG+L  L G G  +  + V+ F++ EF+A+ EF + + E+YG+TLR Y ++Y++GM+DLV +HG KAVLMGQRYGDPW +GM+DF PSTPGWP F R+NPILRW + +VW+FL+ C LPYC LYDEGYTSLGEA  T  NPALRR DG+Y  A++L D  LER+ R
Sbjct:    1 MVNHSLDVVRKALDLYTPLGLAVSFNGGKDACTVLFLLMTVLAERGQLGLLCGPGGDEGKMLVICFDRDEFAAVQEFTQKVAERYGLTLRHYKATYRDGMEDLVQNHGTKAVLMGQRYGDPWTDGMDDFTPSTPGWPEFVRLNPILRWPYDYVWRFLRRCRLPYCHLYDEGYTSLGEAVLTIKNPALRRPDGTYIPAYELHDPALERSNR 210          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A6H5JDS2_9PHAE (PAPS_reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDS2_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 7.870e-73
Identity = 129/214 (60.28%), Postives = 152/214 (71.03%), Query Frame = 2
Query:  422 VQQSMDTIRRALDTFSPS---GLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYFEKQEFSAIMEFLETIKEKYGITLRRYHSSYKEGMQDLV-SHGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDED--LERAYR 1045
            + QS+D +RRAL+ F      GLAISFNGGKDACVVL+LL+ VLAER EL  L     +   I VVYFEK+EF  I  F++ + E Y    +RY  SYK+GMQDLV SHG+KAV+MGQR GDPW E ME F  STPGW  FTRVNP L WKF HVW+ L+G GLPYC LYD+GYTSLGE  DT  N ALR  DGSYR A++L +E+  LER+ R
Sbjct:   51 LSQSLDVVRRALNDFGGETGRGLAISFNGGKDACVVLYLLLFVLAERDELWRLTSSASKH--IPVVYFEKEEFPEIDAFMQQVSETYQFEFQRYSKSYKDGMQDLVESHGIKAVIMGQRRGDPWTEDMEWFTASTPGWAEFTRVNPALEWKFCHVWRLLRGSGLPYCVLYDQGYTSLGERGDTSKNEALRLPDGSYRPAYELAEEEEYLERSPR 262          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A7S1QS86_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QS86_ALECA)

HSP 1 Score: 200 bits (509), Expect = 4.050e-56
Identity = 108/222 (48.65%), Postives = 138/222 (62.16%), Query Frame = 2
Query:  389 LGRRDETFGSLVQQSMDTIRRALDTFSPSG-LAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYFEK-QEFSAIMEFLETIKEKYGITLRRYHS-SYKEGMQDLVSHGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYR 1045
            LG  D+ F +   ++    RR    +S +G LAISFNGGKDACVVLFL +  LA      A    G   +  +VV+F+   EF  +  F+  +     + +    + S++EGM+DLV  GV A++MGQR  DPWM G+  F+PST GWP F R+NPI+ W +  VW FL G GLPYCKLYDEGYTSLG  ++T PNPAL R DGSY  A +L DE LERA R
Sbjct:   52 LGIHDDAFAAAFLRTAAACRRGALLYSTTGELAISFNGGKDACVVLFLWLAALA-----AAPTRNGDTATVPQVVFFDSADEFDCVQCFVAWVVRSLDLPMITVQNRSFREGMEDLVGRGVCAMVMGQRRNDPWMAGVSAFSPSTDGWPAFMRINPIIDWSYADVWTFLLGFGLPYCKLYDEGYTSLGSINNTLPNPALLRHDGSYAPAHELRDESLERAGR 268          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A2R5GWC9_9STRA (FAD synthase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWC9_9STRA)

HSP 1 Score: 192 bits (489), Expect = 4.430e-54
Identity = 108/234 (46.15%), Postives = 146/234 (62.39%), Query Frame = 2
Query:  335 DFAAATASMVQIGTMLQ-LLGRRDETFGSLVQQSMDTIRRALDTFSPSGLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYFEKQ-EFSAIMEFLETIKEKYGITLRRYHSSYKEGMQDLVSHGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDG-SYRAAWQLVDED 1027
            + AAA  ++  +   L+ +L   DET  + +++S+D +R A D ++   LA+SFNGGKD  VV+ LL  VL ER    A  G   Q +  + VYF+K+ EF  +  F++ IKEKYGIT+  Y SSYKEG+  + + G KAVLMGQR  DP+   +  F   +PGWP   R+NPIL W +  +W FL+GC L YCKLYD+GYTSLG  H T+ NP L   DG S R A++L D D
Sbjct:    2 EVAAAPEAVEPLVPKLEAVLAGVDETVKAEIKESLDVLREAFDKYAFGELALSFNGGKDCTVVMHLLRAVLEER---YADAGPERQLANFKFVYFQKKDEFPEMHAFVDQIKEKYGITVDIYPSSYKEGLAMMEAAGFKAVLMGQRRTDPYAADLSHFTHCSPGWPDIVRINPILNWTYRTIWAFLRGCELEYCKLYDQGYTSLGSIHTTKKNPKLH--DGNSSRPAYELDDGD 230          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A4D9DGI7_9STRA (PAPS_reduct domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGI7_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.670e-51
Identity = 101/221 (45.70%), Postives = 136/221 (61.54%), Query Frame = 2
Query:  401 DETFGSLVQQSMDTIRRALDTFSPSGLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYF--EKQEFSAIMEFLETIKEKYGITLRRYHS--SYKEGMQDLVSH-GVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYRR 1048
            +E     +Q+++D I   L  F    LA++FNGGKDACVVL+L+ + L  RG      GG      ++V+YF  E  +F  ++ F+  I E + +T   Y +  S+K+GM+DLV   G+KAV +G R GDP     E   PS+PGWP F RVNP+L W +G +W FL+   LPYC+LYDEGYTSLG+   T  NPALRR +G YR A+ L +  LERA RR
Sbjct:   21 NEALRGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVLYLVQLALRLRGVAEGEAGG-----RLKVLYFSPEHGDFPEVISFMAKISEDHHVTYTTYPAGTSFKDGMRDLVEKKGLKAVFLGVRRGDPHSLESEHLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRVEGGYRPAYALENWTLERANRR 236          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A7S3SR65_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SR65_EMIHU)

HSP 1 Score: 186 bits (472), Expect = 1.040e-50
Identity = 96/237 (40.51%), Postives = 137/237 (57.81%), Query Frame = 2
Query:  341 AAATASMVQIGTMLQLLGRRDETFGSLVQQSMDTIRRALDTFSPSGLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYFEKQ-EFSAIMEFLETIKEKYGITLRRYHSSYKEGMQDLVS-HGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYR 1045
            AA  A  + +   L+L    ++ FG  +++ ++    +L  + P+ +  SFNGGKDA  +L L+   LA   E       G  +  + V++FE++ EF  +  F+    E+Y + L  Y   +  G++  ++ HG  A ++G R GDP   G   F PS+   PPF RVNP+LRW + HVW+ L+G  LP+C LY+EGYTSLG+  DTEPNPALR  DGSYR AW L D  LERA R
Sbjct:   60 AADAADALALHRRLKLRSEVEDEFGRALKEGLEVCAHSLRLYGPARVVTSFNGGKDAVAILHLMRAALAAHSE-----AAGGPRERLRVIFFEQRDEFPEVDAFVRDAVERYDLELCTYSDGFAAGLESCIADHGSAAFVLGTREGDPNGSGQGAFEPSSTWMPPFMRVNPVLRWSYAHVWQLLRGFALPFCSLYEEGYTSLGKQSDTEPNPALRLPDGSYRPAWLLDDGALERAGR 291          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A7S2QJR4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QJR4_9DINO)

HSP 1 Score: 180 bits (457), Expect = 8.790e-50
Identity = 91/188 (48.40%), Postives = 121/188 (64.36%), Query Frame = 2
Query:  500 GKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYFEKQ-EFSAIMEFLETIKEKYGITLRRYHSS-YKEGMQDLVSHGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYRRCRR 1057
            GKDACVVL+L +  LA         GGG       V++F+   EFSA+ +F+  +    G+ +    SS +K GM+ LVS G+ AV+MGQR GDPWM+ ++ F+PS+ GWP F RVNPI+ W + HVW FL+  GLPYC +YD GYTS+G   DT PNPALRR DGS+  A++L D   ERA R  ++
Sbjct:    1 GKDACVVLYLFLASLAAVAGPAP--GGGVVGEGQRVIFFDSDNEFSAVRDFVSWVVSTLGLRMLAVESSGFKRGMEGLVSAGLSAVVMGQRRGDPWMDKVDMFSPSSDGWPAFMRVNPIIDWAYSHVWLFLRAFGLPYCAMYDAGYTSIGSVGDTAPNPALRRPDGSFAPAYELRDASSERAGRHAKK 186          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A813JD34_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JD34_POLGL)

HSP 1 Score: 187 bits (475), Expect = 1.190e-48
Identity = 104/236 (44.07%), Postives = 142/236 (60.17%), Query Frame = 2
Query:  350 TASMVQIGTMLQLLGRRDETFGSLVQQSMDTIRRALDTFSPSG-LAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIE-VVYFEK-QEFSAIMEFLETIKEKYGITLRRYHS-SYKEGMQDLVSHGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYR 1045
            TA        L+ LG  DETF   +++S    RR    +  S  LA+SFNGGKDACVVL+L +  LA         G     S  + V++F+   EF+ +  F+  +  +  + +      S+++GM+DLV+ G++AV+MGQR GDPWM+ ++ F+PS  GWP F RVNPI+ W +  +W FL+  GLPYC LYD+GYTSLG    T  NPAL R DG+Y AA +LVD  LERA R
Sbjct:   35 TADKEAQAKQLRDLGVTDETFAPALRRSCMLCRRGAQLYPRSSDLAVSFNGGKDACVVLYLWLASLAAHARSAGKDGAEPSASEPQQVIFFDSPDEFAHVRLFVAWVIRRLSLKMVVIDGCSFRKGMEDLVAGGMRAVVMGQRKGDPWMDKVDAFSPSDDGWPVFMRVNPIMDWSYSQIWAFLRVFGLPYCDLYDQGYTSLGSIGSTLKNPALLRPDGTYGAAHELVDGSLERAGR 270          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A8J9RQH9_9CHLO (Probable FAD synthase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQH9_9CHLO)

HSP 1 Score: 181 bits (459), Expect = 7.760e-47
Identity = 91/220 (41.36%), Postives = 132/220 (60.00%), Query Frame = 2
Query:  428 QSMDTIRRALDTFSPSGLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQK-----SAIEVVYFEKQE-FSAIMEFLETIKEKYGITLRRYHSSYKEGMQDLVS-HGVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYRRCRRASQ 1066
            +++  ++R +D +  + LA SFNGGKD+ VVL +L   +A R E  +L  G +         I   +FE+ + F  + EF+  +   Y + +R+ H  +K G++ LV+   ++A+ +G R GDP  +G ++F PS+PGWPPF RVNPIL W +  VW FL+   +PYC LYD G+TSLG   +T PN ALR+ DGSY  A  L D  +ERA R C  A Q
Sbjct:   21 RAVTNVQRTVDLYGVAALAFSFNGGKDSTVVLHILRAAMALRFERHSLSNGSNAPPFSGLGGILSFFFERMDDFKEVREFVNAMDAHYTLQVRKMHGDFKAGLEQLVTASSIRAIFLGTRRGDPNAQGQDEFCPSSPGWPPFMRVNPILGWTYADVWAFLRATRVPYCSLYDNGFTSLGSVDNTRPNSALRKEDGSYAPAHLLYDIRMERAGRSCAAAEQ 240          
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Match: A0A0E9N8U6_SAICN (Uncharacterized protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9N8U6_SAICN)

HSP 1 Score: 174 bits (442), Expect = 9.110e-47
Identity = 85/212 (40.09%), Postives = 127/212 (59.91%), Query Frame = 2
Query:  422 VQQSMDTIRRALDTFSPSGLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVYFEKQEFSAIMEFLETIKEKYGITLRRYHSSYKEGMQDLVSH--GVKAVLMGQRYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCKLYDEGYTSLGEAHDTEPNPALRRFDGS--YRAAWQLVDEDLERAYR 1045
            V+ S++ I++ALD + P GLA+S+NGGKD  V+L L   ++  +    +         +  +    K  F  +  F++     +G+ L R     K   +D +    GV+A+++G R GDP  EG+     +  GWP F RV+P+L W++  VW+FL+   +PYC+LYD+GYTSLG+ HDT PNPAL+R +G   +R AWQLVDED+ERA R
Sbjct:   43 VRDSLEVIQKALDEYGPEGLALSYNGGKDCLVLLALYYSLIPPQPSPKSTSPAAQLLPSPSIYVTPKHPFPQVESFVDESAAAFGLELIRIPVPMKAAFEDYLRRKTGVRAIMVGTRRGDPHGEGLRTCQRTDQGWPDFVRVHPVLEWRYAEVWEFLRALQIPYCELYDQGYTSLGDVHDTHPNPALKRENGEEGFRPAWQLVDEDMERAGR 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7323.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNH1_9STRA1.760e-8560.95FAD synthetase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A6H5JDS2_9PHAE7.870e-7360.28PAPS_reduct domain-containing protein n=2 Tax=Ecto... [more]
A0A7S1QS86_ALECA4.050e-5648.65Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A2R5GWC9_9STRA4.430e-5446.15FAD synthase n=1 Tax=Hondaea fermentalgiana TaxID=... [more]
A0A4D9DGI7_9STRA2.670e-5145.70PAPS_reduct domain-containing protein n=1 Tax=Nann... [more]
A0A7S3SR65_EMIHU1.040e-5040.51Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A7S2QJR4_9DINO8.790e-5048.40Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A813JD34_POLGL1.190e-4844.07Hypothetical protein (Fragment) n=3 Tax=Polarella ... [more]
A0A8J9RQH9_9CHLO7.760e-4741.36Probable FAD synthase n=1 Tax=Coccomyxa sp. Obi Ta... [more]
A0A0E9N8U6_SAICN9.110e-4740.09Uncharacterized protein n=2 Tax=Saitoella complica... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7323contigP-wetherbeei_contig7323:863..2828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQC0
PFAMsMoCF_biosynth,PAPS_reduct
Model size1713
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00953
KEGG ReactionR00161
KEGG Pathwayko00740,ko01100,ko01110,map00740,map01100,map01110
KEGG ModuleM00125
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003919,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006747,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042726,GO:0042727,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046443,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070566,GO:0071704,GO:0071944,GO:0072387,GO:0072388,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons2
Evalue2.86e-76
EggNOG OGsCOG0175@1|root,KOG2644@2759|Eukaryota
Ec32 ortholog descriptionFAD synthetase
Ec32 orthologEc-01_006670.1
EC2.7.7.2
Descriptionflavin adenine dinucleotide biosynthetic process
Cds size1167
COG categoryEH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186972.3941104-UTR-P-wetherbeei_contig7323:862..10951683186972.3941104-UTR-P-wetherbeei_contig7323:862..1095Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7323 863..1095 -
1683186972.435777-UTR-P-wetherbeei_contig7323:2515..28281683186972.435777-UTR-P-wetherbeei_contig7323:2515..2828Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7323 2516..2828 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186972.4089265-CDS-P-wetherbeei_contig7323:1095..16951683186972.4089265-CDS-P-wetherbeei_contig7323:1095..1695Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7323 1096..1695 -
1683186972.4203887-CDS-P-wetherbeei_contig7323:1948..25151683186972.4203887-CDS-P-wetherbeei_contig7323:1948..2515Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7323 1949..2515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7323.2.1prot_P-wetherbeei_contig7323.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7323 1096..2515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7323.2.1

>prot_P-wetherbeei_contig7323.2.1 ID=prot_P-wetherbeei_contig7323.2.1|Name=mRNA_P-wetherbeei_contig7323.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=389bp
MTGNGAFDFAAATASMVQIGTMLQLLGRRDETFGSLVQQSMDTIRRALDT
FSPSGLAISFNGGKDACVVLFLLMVVLAERGELTALIGGGHQKSAIEVVY
FEKQEFSAIMEFLETIKEKYGITLRRYHSSYKEGMQDLVSHGVKAVLMGQ
RYGDPWMEGMEDFAPSTPGWPPFTRVNPILRWKFGHVWKFLKGCGLPYCK
LYDEGYTSLGEAHDTEPNPALRRFDGSYRAAWQLVDEDLERAYRRCRRAS
QQQQEHVGAAAAPADTSSLTSSSCSDSDVDGGADGNAGVGGLAKGSARLV
DFDGIASDREDAPTTVAAAAPSTDVTDPAAAAAAGAEDRDPSMATRALAA
VRRTLTGRGVPIAACAVALVLASMLKGAASRHASFRRR*
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mRNA from alignment at P-wetherbeei_contig7323:863..2828-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7323.2.1 ID=mRNA_P-wetherbeei_contig7323.2.1|Name=mRNA_P-wetherbeei_contig7323.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1966bp|location=Sequence derived from alignment at P-wetherbeei_contig7323:863..2828- (Phaeothamnion wetherbeei SAG_119_79)
GTGAGGTATTTCGGAACTATTACGGAAGGAGCCATTGCTCCTATTACCTG GAGGGCAAAAGATAGTGCTCTCCATCAGGCTCTCACTCCGTTCCGAGCCA GCGGCAGCAGAAAACGTGCAACGAAATTTCCCGGAAACTCGTGTTTCTGC TTCGGTGCCCCTTCCTCTGCCCTGCCTTCGTCGAGTCTTCCTTCTTCTCA TCTTCATCATTAAGCGAAGCGAGCACCGCTTACGCAAGCGTCACGCTGGG GCGAAGGGAAAGCGCCGGCGACCTCGGGAAAAGGAGCTGGCGCAGGGCGG AGGCTCCACCAAAATGACCGGAAATGGCGCTTTCGATTTCGCAGCAGCCA CGGCGTCGATGGTGCAGATCGGCACCATGCTGCAACTCCTCGGTCGCCGG GACGAGACCTTCGGAAGTCTTGTGCAACAGTCGATGGATACCATCAGGCG TGCGCTTGACACGTTTTCACCTTCTGGCCTCGCCATCAGCTTCAATGGCG GAAAGGACGCCTGCGTTGTGCTCTTCCTTCTCATGGTCGTGCTGGCGGAG CGCGGAGAACTAACCGCCCTTATTGGCGGAGGACACCAAAAATCTGCCAT CGAAGTCGTGTATTTCGAGAAGCAAGAGTTTTCCGCAATCATGGAGTTCC TGGAAACGATAAAAGAGAAGTACGGCATCACGCTGCGGAGGTACCACAGC TCGTACAAGGAAGGAATGCAAGATTTGGTGTCGCACGGCGTTAAGGCGGT CCTCATGGGGCAGCGCTACGGCGACCCGTGGATGGAAGGGATGGAGGACT TTGCTCCGTCAACTCCCGGCTGGCCGCCCTTCACACGCGTCAACCCCATC CTCCGCTGGAAGTTCGGACATGTCTGGAAAGTAAGAGGGAAGTGGCTGGT GGGAGACCTCTGCGCAAATGGCATCGGGAAGTTTGCGTTGCGGCGCCTTT ATGTTGAATTCAGTTTTCTTTCTCGTTCTAGCTCTGTCACGCGAACCCTT GAAGTTGTTACGCTTGCAACGACATGATGGCATTTCCTGTGCGATTTTCT TTCCTCCTCCTGAAGACCTCTCGCCCCGCCGTGCTTTTTGCGAACCACAT GTCGCGGCATCCATGCTTCGATCCATGCGATAGTTTTTGAAGGGCTGCGG CCTGCCGTACTGCAAACTCTACGACGAAGGATACACCTCCCTAGGGGAGG CCCACGATACGGAGCCCAACCCGGCGCTGCGGCGGTTCGACGGCTCCTAT CGGGCCGCCTGGCAGCTGGTGGACGAAGATTTGGAGCGGGCGTACCGCCG CTGCCGCCGCGCCTCCCAGCAGCAGCAGGAGCACGTCGGGGCGGCAGCGG CACCGGCGGACACGTCGTCGCTGACGTCTTCGTCGTGCTCCGACAGCGAC GTGGACGGCGGCGCTGACGGCAACGCCGGTGTCGGCGGCCTTGCAAAGGG ATCGGCAAGACTTGTCGACTTTGATGGGATTGCGAGCGATAGGGAGGATG CGCCGACGACGGTGGCGGCAGCAGCGCCGTCCACAGACGTTACCGACCCG GCAGCGGCGGCGGCGGCGGGCGCGGAGGATAGAGATCCGAGCATGGCGAC GCGTGCCCTCGCCGCGGTGCGGCGCACTTTGACGGGACGCGGGGTGCCCA TCGCCGCCTGCGCCGTAGCGCTAGTGTTGGCGAGCATGTTAAAGGGGGCG GCGAGTCGACACGCCTCCTTTCGGCGCCGTTGAAGGCGGAAGAATAAGGT CACAACACGATACGCCTCCTTTCGGCGGCGTTGAAGGCGGAAGAATAAGG TCGCAACACGATACGCCTCCTTTCGGCGGCGTTGAAGGCGGAAGAATAAG GTCGCAACAGAGGCAGGGGCAGCGACTAAATCTTGTCTGACAGTTCCCTT CAGAACGCCTAAATTTTGCCTTCCTTGCTCGAAAGCGGACACTCTAATAC TACCTAAGATCCAGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7323:863..2828-

>mRNA_P-wetherbeei_contig7323.2.1 ID=mRNA_P-wetherbeei_contig7323.2.1|Name=mRNA_P-wetherbeei_contig7323.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig7323:863..2828- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGGAAATGGCGCTTTCGATTTCGCAGCAGCCACGGCGTCGATGGT
GCAGATCGGCACCATGCTGCAACTCCTCGGTCGCCGGGACGAGACCTTCG
GAAGTCTTGTGCAACAGTCGATGGATACCATCAGGCGTGCGCTTGACACG
TTTTCACCTTCTGGCCTCGCCATCAGCTTCAATGGCGGAAAGGACGCCTG
CGTTGTGCTCTTCCTTCTCATGGTCGTGCTGGCGGAGCGCGGAGAACTAA
CCGCCCTTATTGGCGGAGGACACCAAAAATCTGCCATCGAAGTCGTGTAT
TTCGAGAAGCAAGAGTTTTCCGCAATCATGGAGTTCCTGGAAACGATAAA
AGAGAAGTACGGCATCACGCTGCGGAGGTACCACAGCTCGTACAAGGAAG
GAATGCAAGATTTGGTGTCGCACGGCGTTAAGGCGGTCCTCATGGGGCAG
CGCTACGGCGACCCGTGGATGGAAGGGATGGAGGACTTTGCTCCGTCAAC
TCCCGGCTGGCCGCCCTTCACACGCGTCAACCCCATCCTCCGCTGGAAGT
TCGGACATGTCTGGAAATTTTTGAAGGGCTGCGGCCTGCCGTACTGCAAA
CTCTACGACGAAGGATACACCTCCCTAGGGGAGGCCCACGATACGGAGCC
CAACCCGGCGCTGCGGCGGTTCGACGGCTCCTATCGGGCCGCCTGGCAGC
TGGTGGACGAAGATTTGGAGCGGGCGTACCGCCGCTGCCGCCGCGCCTCC
CAGCAGCAGCAGGAGCACGTCGGGGCGGCAGCGGCACCGGCGGACACGTC
GTCGCTGACGTCTTCGTCGTGCTCCGACAGCGACGTGGACGGCGGCGCTG
ACGGCAACGCCGGTGTCGGCGGCCTTGCAAAGGGATCGGCAAGACTTGTC
GACTTTGATGGGATTGCGAGCGATAGGGAGGATGCGCCGACGACGGTGGC
GGCAGCAGCGCCGTCCACAGACGTTACCGACCCGGCAGCGGCGGCGGCGG
CGGGCGCGGAGGATAGAGATCCGAGCATGGCGACGCGTGCCCTCGCCGCG
GTGCGGCGCACTTTGACGGGACGCGGGGTGCCCATCGCCGCCTGCGCCGT
AGCGCTAGTGTTGGCGAGCATGTTAAAGGGGGCGGCGAGTCGACACGCCT
CCTTTCGGCGCCGTTGA
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