mRNA_P-wetherbeei_contig732.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A835YWK2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK2_9STRA) HSP 1 Score: 302 bits (774), Expect = 1.550e-100 Identity = 139/197 (70.56%), Postives = 159/197 (80.71%), Query Frame = 1
Query: 172 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARK 762
GGA HLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKP FSQTLLL HMYQ+P SA++AAGGDP+ ++++ D L KFG ++EM+VCDNLGDHLVGN+YIKFSDEEDA ALKGL+GRWY GRP+V EFS V DFREAR CRQYDEGTC RGG CNFMHVR +SK V+R+L+++ARK
Sbjct: 20 GGAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTLLLSHMYQNPASALLAAGGDPNAIDQDAANDEFEDFYEEVYEELCKFGSVEEMHVCDNLGDHLVGNVYIKFSDEEDADAALKGLFGRWYGGRPMVPEFSPVNDFREAR------CRQYDEGTCGRGGQCNFMHVRHVSKDVVRYLDKVARK 210
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A835ZC00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC00_9STRA) HSP 1 Score: 301 bits (771), Expect = 1.810e-98 Identity = 137/200 (68.50%), Postives = 159/200 (79.50%), Query Frame = 1
Query: 175 GAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARKRARG 774
GA HLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKP FSQT+LL HM+Q+P SA++AAGG+P +++E D L KFG ++EMNVCDNLGDHLVGN+Y+KFSDEEDA ALKGL+GRWYAGRP+V EFS VTDFREAR CRQYDEGTC RGG CNFMHVR +S+ V R+ +++AR+ RG
Sbjct: 62 GAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTILLSHMFQNPASALIAAGGNPETIDQEATNDEFEDFYEEVYEELCKFGTVEEMNVCDNLGDHLVGNVYVKFSDEEDADNALKGLFGRWYAGRPMVPEFSPVTDFREAR------CRQYDEGTCGRGGQCNFMHVRHVSRDVARYCDKMARRARRG 255
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: D7G5I7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I7_ECTSI) HSP 1 Score: 300 bits (767), Expect = 6.730e-96 Identity = 146/208 (70.19%), Postives = 169/208 (81.25%), Query Frame = 1
Query: 145 RDDDGPFGS--GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARK 762
RD +G GS GGA HLARIHGTEEDKVNCPF+YKIGACRHGDRCSRQHHKP FSQT+L+Q++YQ+P SAV+AAGGDPSQL ++ ++D XXXX LSKFG I EMNVCDNLGDHL+GN+Y+KF DEEDA ALKGL GRWYA RPI+ EFS VTDFREAR CRQ+DEGTCNRGG CNFMHV+ + + V+ +LE+L RK
Sbjct: 48 RDRNGMSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGDPSQLPKDHVQDDFEDXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREAR------CRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLEKLLRK 249
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A7S3XMX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMX4_HETAK) HSP 1 Score: 282 bits (722), Expect = 2.570e-92 Identity = 129/202 (63.86%), Postives = 157/202 (77.72%), Query Frame = 1
Query: 172 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLR-FLERLARKRARG 774
GGA HLARIHGTEEDKVNCPFY+KIGACRHGDRCSRQHHKP FSQT+L+QHMYQ+P SA+ AAGGDP+ ++ + ++ LSKFG ++E+N+CDNLGDHLVGN+Y K++DEEDA ALK LYGR+YAGRP++ EFS VTDFREAR CRQ+DEGTC RGG+CNFMHV+ + + + R L + A KR G
Sbjct: 22 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTVLVQHMYQNPASAIAAAGGDPNSIDHRQAQEDFEEFYEEVFEELSKFGAVEELNICDNLGDHLVGNVYAKYADEEDADSALKALYGRFYAGRPLICEFSPVTDFREAR------CRQFDEGTCARGGYCNFMHVKAVPRGLQRDLLRKFAPKRGGG 217
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: F0W2M2_9STRA (Splicing factor U2AF 35 kDa subunit putative n=2 Tax=Albugo TaxID=65356 RepID=F0W2M2_9STRA) HSP 1 Score: 279 bits (713), Expect = 1.490e-89 Identity = 125/198 (63.13%), Postives = 156/198 (78.79%), Query Frame = 1
Query: 160 PFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERL 753
P GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L+ HMYQ+P S ++A GDPS L+++++++ L KFG+++E+N+CDNLGDHLVGN+Y+K+ DEE A A K LYGR+YAGRP+V EFS VTDFREAR CRQ+DEGTCNRGG+CNFMHV+ +S+S+ R LERL
Sbjct: 45 PTTGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPSGLDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHVKTVSRSMQRELERL 236
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: F0Y2V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2V2_AURAN) HSP 1 Score: 272 bits (696), Expect = 4.570e-89 Identity = 122/191 (63.87%), Postives = 151/191 (79.06%), Query Frame = 1
Query: 178 AAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 750
A HLARIHGTEEDKVNCPFY+KIGACRHGDRCSRQHHKP FSQT+++QHMYQ+P S + AAGGDPSQL+ +++++ L+K+G I+E+NVC+NLGDH+VGN+Y KF+DEE +LK L+GR+YAGRP+V EFS VTDFREAR CRQYDE C RGG+CNFMH+R S+S+ R LE+
Sbjct: 1 ATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGDPSQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASLKALFGRFYAGRPLVCEFSPVTDFREAR------CRQYDEAVCTRGGYCNFMHIRTPSRSLRRDLEK 185
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: T0S0M7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0M7_SAPDV) HSP 1 Score: 276 bits (705), Expect = 5.470e-89 Identity = 124/197 (62.94%), Postives = 154/197 (78.17%), Query Frame = 1
Query: 160 PFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 750
P GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L++HMYQ+P S ++AA GDPSQL+++ +++ L KFG++DE+NVCDNLGDHLVGN+Y KF DEE A A K LYGR+Y GRP++ EFS VTDFREAR CRQ+DEGTCNRGG+CNFMH++ +S +++ LER
Sbjct: 47 PGVGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVKHMYQNPLSVIIAANGDPSQLDQKTVDEDFEDFFEEVYEELCKFGKVDELNVCDNLGDHLVGNVYAKFDDEECAAAAQKALYGRFYGGRPLICEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIKMVSHAMMIELER 237
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A8K1CHU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHU8_PYTOL) HSP 1 Score: 276 bits (705), Expect = 6.440e-89 Identity = 123/194 (63.40%), Postives = 152/194 (78.35%), Query Frame = 1
Query: 172 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERL 753
GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L+ HMYQ+P S ++A GDP+ L+ ++ E+ L KFG+++E+N+CDNLGDHLVGN+Y K+ DEEDA A K LYGR+YAGRP+V EFS VTDFREAR CRQ+DEGTCNRGG+CNFMH+R ++ S+ R LER+
Sbjct: 53 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPTHLDRKQAEEDFEDFYEEVFEELCKFGKLEELNICDNLGDHLVGNVYAKYEDEEDAAAAQKALYGRFYAGRPLVCEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIRTVAPSMQRELERI 240
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A024TD10_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD10_9STRA) HSP 1 Score: 273 bits (699), Expect = 2.010e-88 Identity = 125/202 (61.88%), Postives = 156/202 (77.23%), Query Frame = 1
Query: 145 RDDDGPFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 750
RD G GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQTLL++HMYQ+P S V+AA GDP+QL+++ +++ L KFG+++E+NVCDNLGDHLVGN+Y KF DEE A A LYGR+Y GRPI+ E+S VTDFREAR CRQ+DEGTCNRGG+CNFMH++ +S++++ LER
Sbjct: 27 RDRRGDATGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRSHNKPVFSQTLLVKHMYQNPLSTVIAANGDPNQLDQKTVDEDFEDFFEEVFEELCKFGKLEELNVCDNLGDHLVGNVYAKFEDEECAAAAHTALYGRFYGGRPIMCEYSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIKMVSRAMMIELER 222
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A7S2C7Z9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7Z9_9STRA) HSP 1 Score: 273 bits (698), Expect = 2.260e-88 Identity = 121/201 (60.20%), Postives = 162/201 (80.60%), Query Frame = 1
Query: 169 SGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARKRAR 771
SGGAAHLARIHGTEED+VNCPFY+KIG+CRHG+RCSRQHHKP FSQT+L++HM+Q+P SA +A GGDP+Q++E+++++ L+ +G ++E NVC+NLGDH+VGN+Y+KF DEEDA +ALK L+GR+YAGRP+V EFS VTDFREAR CRQ+DE +C RGG+CNFMH++ S+S+ R L++ K++R
Sbjct: 25 SGGAAHLARIHGTEEDRVNCPFYFKIGSCRHGERCSRQHHKPPFSQTVLVKHMWQNPVSAHIAQGGDPAQIDEKDVQEKFDEFFEEIYEELASYGTVEECNVCENLGDHMVGNVYVKFEDEEDADDALKALFGRFYAGRPLVVEFSPVTDFREAR------CRQFDEASCARGGYCNFMHIKSPSRSLQRQLDKQYAKKSR 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig732.4.1 >prot_P-wetherbeei_contig732.4.1 ID=prot_P-wetherbeei_contig732.4.1|Name=mRNA_P-wetherbeei_contig732.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp MSYYGKGGGDRRGGDSYGGSRGGGGYGGGGGGFGGGGFGGGRGGGRRGRDback to top mRNA from alignment at P-wetherbeei_contig732:6053..8910+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig732.4.1 ID=mRNA_P-wetherbeei_contig732.4.1|Name=mRNA_P-wetherbeei_contig732.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2858bp|location=Sequence derived from alignment at P-wetherbeei_contig732:6053..8910+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig732:6053..8910+ >mRNA_P-wetherbeei_contig732.4.1 ID=mRNA_P-wetherbeei_contig732.4.1|Name=mRNA_P-wetherbeei_contig732.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig732:6053..8910+ (Phaeothamnion wetherbeei SAG_119_79)back to top |