mRNA_P-wetherbeei_contig732.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig732.4.1
Unique NamemRNA_P-wetherbeei_contig732.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A835YWK2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK2_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.550e-100
Identity = 139/197 (70.56%), Postives = 159/197 (80.71%), Query Frame = 1
Query:  172 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARK 762
            GGA HLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKP FSQTLLL HMYQ+P SA++AAGGDP+ ++++   D            L KFG ++EM+VCDNLGDHLVGN+YIKFSDEEDA  ALKGL+GRWY GRP+V EFS V DFREAR      CRQYDEGTC RGG CNFMHVR +SK V+R+L+++ARK
Sbjct:   20 GGAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTLLLSHMYQNPASALLAAGGDPNAIDQDAANDEFEDFYEEVYEELCKFGSVEEMHVCDNLGDHLVGNVYIKFSDEEDADAALKGLFGRWYGGRPMVPEFSPVNDFREAR------CRQYDEGTCGRGGQCNFMHVRHVSKDVVRYLDKVARK 210          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A835ZC00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC00_9STRA)

HSP 1 Score: 301 bits (771), Expect = 1.810e-98
Identity = 137/200 (68.50%), Postives = 159/200 (79.50%), Query Frame = 1
Query:  175 GAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARKRARG 774
            GA HLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKP FSQT+LL HM+Q+P SA++AAGG+P  +++E   D            L KFG ++EMNVCDNLGDHLVGN+Y+KFSDEEDA  ALKGL+GRWYAGRP+V EFS VTDFREAR      CRQYDEGTC RGG CNFMHVR +S+ V R+ +++AR+  RG
Sbjct:   62 GAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTILLSHMFQNPASALIAAGGNPETIDQEATNDEFEDFYEEVYEELCKFGTVEEMNVCDNLGDHLVGNVYVKFSDEEDADNALKGLFGRWYAGRPMVPEFSPVTDFREAR------CRQYDEGTCGRGGQCNFMHVRHVSRDVARYCDKMARRARRG 255          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: D7G5I7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I7_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 6.730e-96
Identity = 146/208 (70.19%), Postives = 169/208 (81.25%), Query Frame = 1
Query:  145 RDDDGPFGS--GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARK 762
            RD +G  GS  GGA HLARIHGTEEDKVNCPF+YKIGACRHGDRCSRQHHKP FSQT+L+Q++YQ+P SAV+AAGGDPSQL ++ ++D    XXXX    LSKFG I EMNVCDNLGDHL+GN+Y+KF DEEDA  ALKGL GRWYA RPI+ EFS VTDFREAR      CRQ+DEGTCNRGG CNFMHV+ + + V+ +LE+L RK
Sbjct:   48 RDRNGMSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGDPSQLPKDHVQDDFEDXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREAR------CRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLEKLLRK 249          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A7S3XMX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMX4_HETAK)

HSP 1 Score: 282 bits (722), Expect = 2.570e-92
Identity = 129/202 (63.86%), Postives = 157/202 (77.72%), Query Frame = 1
Query:  172 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLR-FLERLARKRARG 774
            GGA HLARIHGTEEDKVNCPFY+KIGACRHGDRCSRQHHKP FSQT+L+QHMYQ+P SA+ AAGGDP+ ++  + ++            LSKFG ++E+N+CDNLGDHLVGN+Y K++DEEDA  ALK LYGR+YAGRP++ EFS VTDFREAR      CRQ+DEGTC RGG+CNFMHV+ + + + R  L + A KR  G
Sbjct:   22 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTVLVQHMYQNPASAIAAAGGDPNSIDHRQAQEDFEEFYEEVFEELSKFGAVEELNICDNLGDHLVGNVYAKYADEEDADSALKALYGRFYAGRPLICEFSPVTDFREAR------CRQFDEGTCARGGYCNFMHVKAVPRGLQRDLLRKFAPKRGGG 217          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: F0W2M2_9STRA (Splicing factor U2AF 35 kDa subunit putative n=2 Tax=Albugo TaxID=65356 RepID=F0W2M2_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.490e-89
Identity = 125/198 (63.13%), Postives = 156/198 (78.79%), Query Frame = 1
Query:  160 PFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERL 753
            P   GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L+ HMYQ+P S ++A  GDPS L+++++++            L KFG+++E+N+CDNLGDHLVGN+Y+K+ DEE A  A K LYGR+YAGRP+V EFS VTDFREAR      CRQ+DEGTCNRGG+CNFMHV+ +S+S+ R LERL
Sbjct:   45 PTTGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPSGLDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHVKTVSRSMQRELERL 236          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: F0Y2V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2V2_AURAN)

HSP 1 Score: 272 bits (696), Expect = 4.570e-89
Identity = 122/191 (63.87%), Postives = 151/191 (79.06%), Query Frame = 1
Query:  178 AAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 750
            A HLARIHGTEEDKVNCPFY+KIGACRHGDRCSRQHHKP FSQT+++QHMYQ+P S + AAGGDPSQL+ +++++            L+K+G I+E+NVC+NLGDH+VGN+Y KF+DEE    +LK L+GR+YAGRP+V EFS VTDFREAR      CRQYDE  C RGG+CNFMH+R  S+S+ R LE+
Sbjct:    1 ATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGDPSQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASLKALFGRFYAGRPLVCEFSPVTDFREAR------CRQYDEAVCTRGGYCNFMHIRTPSRSLRRDLEK 185          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: T0S0M7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0M7_SAPDV)

HSP 1 Score: 276 bits (705), Expect = 5.470e-89
Identity = 124/197 (62.94%), Postives = 154/197 (78.17%), Query Frame = 1
Query:  160 PFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 750
            P   GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L++HMYQ+P S ++AA GDPSQL+++ +++            L KFG++DE+NVCDNLGDHLVGN+Y KF DEE A  A K LYGR+Y GRP++ EFS VTDFREAR      CRQ+DEGTCNRGG+CNFMH++ +S +++  LER
Sbjct:   47 PGVGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVKHMYQNPLSVIIAANGDPSQLDQKTVDEDFEDFFEEVYEELCKFGKVDELNVCDNLGDHLVGNVYAKFDDEECAAAAQKALYGRFYGGRPLICEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIKMVSHAMMIELER 237          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A8K1CHU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHU8_PYTOL)

HSP 1 Score: 276 bits (705), Expect = 6.440e-89
Identity = 123/194 (63.40%), Postives = 152/194 (78.35%), Query Frame = 1
Query:  172 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERL 753
            GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L+ HMYQ+P S ++A  GDP+ L+ ++ E+            L KFG+++E+N+CDNLGDHLVGN+Y K+ DEEDA  A K LYGR+YAGRP+V EFS VTDFREAR      CRQ+DEGTCNRGG+CNFMH+R ++ S+ R LER+
Sbjct:   53 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPTHLDRKQAEEDFEDFYEEVFEELCKFGKLEELNICDNLGDHLVGNVYAKYEDEEDAAAAQKALYGRFYAGRPLVCEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIRTVAPSMQRELERI 240          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A024TD10_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD10_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.010e-88
Identity = 125/202 (61.88%), Postives = 156/202 (77.23%), Query Frame = 1
Query:  145 RDDDGPFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 750
            RD  G    GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQTLL++HMYQ+P S V+AA GDP+QL+++ +++            L KFG+++E+NVCDNLGDHLVGN+Y KF DEE A  A   LYGR+Y GRPI+ E+S VTDFREAR      CRQ+DEGTCNRGG+CNFMH++ +S++++  LER
Sbjct:   27 RDRRGDATGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRSHNKPVFSQTLLVKHMYQNPLSTVIAANGDPNQLDQKTVDEDFEDFFEEVFEELCKFGKLEELNVCDNLGDHLVGNVYAKFEDEECAAAAHTALYGRFYGGRPIMCEYSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIKMVSRAMMIELER 222          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A7S2C7Z9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7Z9_9STRA)

HSP 1 Score: 273 bits (698), Expect = 2.260e-88
Identity = 121/201 (60.20%), Postives = 162/201 (80.60%), Query Frame = 1
Query:  169 SGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARKRAR 771
            SGGAAHLARIHGTEED+VNCPFY+KIG+CRHG+RCSRQHHKP FSQT+L++HM+Q+P SA +A GGDP+Q++E+++++            L+ +G ++E NVC+NLGDH+VGN+Y+KF DEEDA +ALK L+GR+YAGRP+V EFS VTDFREAR      CRQ+DE +C RGG+CNFMH++  S+S+ R L++   K++R
Sbjct:   25 SGGAAHLARIHGTEEDRVNCPFYFKIGSCRHGERCSRQHHKPPFSQTVLVKHMWQNPVSAHIAQGGDPAQIDEKDVQEKFDEFFEEIYEELASYGTVEECNVCENLGDHMVGNVYVKFEDEEDADDALKALFGRFYAGRPLVVEFSPVTDFREAR------CRQFDEASCARGGYCNFMHIKSPSRSLQRQLDKQYAKKSR 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWK2_9STRA1.550e-10070.56Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZC00_9STRA1.810e-9868.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5I7_ECTSI6.730e-9670.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XMX4_HETAK2.570e-9263.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0W2M2_9STRA1.490e-8963.13Splicing factor U2AF 35 kDa subunit putative n=2 T... [more]
F0Y2V2_AURAN4.570e-8963.87Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
T0S0M7_SAPDV5.470e-8962.94Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8K1CHU8_PYTOL6.440e-8963.40Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TD10_9STRA2.010e-8861.88Uncharacterized protein n=7 Tax=Aphanomyces TaxID=... [more]
A0A7S2C7Z9_9STRA2.260e-8860.20Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig732contigP-wetherbeei_contig732:6053..8910 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G5I7
Preferred nameU2AF1
PFAMsRRM_1,zf-CCCH
Model size906
Max annot lvl2759|Eukaryota
KEGG koko:K12836
KEGG Pathwayko03040,ko05131,map03040,map05131
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000243,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008380,GO:0009314,GO:0009416,GO:0009628,GO:0009648,GO:0009791,GO:0009889,GO:0009987,GO:0010228,GO:0010467,GO:0010468,GO:0010556,GO:0010810,GO:0010811,GO:0015030,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0019904,GO:0022414,GO:0030155,GO:0030628,GO:0031123,GO:0031124,GO:0031323,GO:0031326,GO:0031503,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0036002,GO:0042710,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0043900,GO:0043902,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044764,GO:0045184,GO:0045292,GO:0045785,GO:0046483,GO:0046907,GO:0048024,GO:0048518,GO:0048522,GO:0048573,GO:0048608,GO:0048731,GO:0048856,GO:0050657,GO:0050658,GO:0050684,GO:0050733,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0070727,GO:0071004,GO:0071010,GO:0071013,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0089701,GO:0090304,GO:0090605,GO:0090609,GO:0097159,GO:1900187,GO:1900189,GO:1900190,GO:1900192,GO:1901360,GO:1901363,GO:1902494,GO:1903311,GO:1903506,GO:1990904,GO:2000112,GO:2001141
Exons7
Evalue1.1e-96
EggNOG OGsKOG2202@1|root,KOG2202@2759|Eukaryota
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-22_000800.1
Descriptionpre-mRNA 3'-splice site binding
Cds size906
COG categoryS
BRITEko00000,ko00001,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig732.4.1prot_P-wetherbeei_contig732.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig732 6053..8910 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186972.1714685-CDS-P-wetherbeei_contig732:6052..61981683186972.1714685-CDS-P-wetherbeei_contig732:6052..6198Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig732 6053..6198 +
1683186972.1842506-CDS-P-wetherbeei_contig732:6357..64301683186972.1842506-CDS-P-wetherbeei_contig732:6357..6430Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig732 6358..6430 +
1683186972.1940713-CDS-P-wetherbeei_contig732:6693..68791683186972.1940713-CDS-P-wetherbeei_contig732:6693..6879Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig732 6694..6879 +
1683186972.2053704-CDS-P-wetherbeei_contig732:7301..73221683186972.2053704-CDS-P-wetherbeei_contig732:7301..7322Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig732 7302..7322 +
1683186972.2164567-CDS-P-wetherbeei_contig732:7749..79731683186972.2164567-CDS-P-wetherbeei_contig732:7749..7973Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig732 7750..7973 +
1683186972.2274644-CDS-P-wetherbeei_contig732:8354..85431683186972.2274644-CDS-P-wetherbeei_contig732:8354..8543Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig732 8355..8543 +
1683186972.238599-CDS-P-wetherbeei_contig732:8843..89101683186972.238599-CDS-P-wetherbeei_contig732:8843..8910Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig732 8844..8910 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig732.4.1

>prot_P-wetherbeei_contig732.4.1 ID=prot_P-wetherbeei_contig732.4.1|Name=mRNA_P-wetherbeei_contig732.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MSYYGKGGGDRRGGDSYGGSRGGGGYGGGGGGFGGGGFGGGRGGGRRGRD
DDGPFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAF
SQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDQFEDFYEEVYEELSKF
GRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAE
FSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER
LARKRARGEPVNEPSREERRRRSSRSTSRPRDRDRGGRDRDRDRDRDRDR
DR
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mRNA from alignment at P-wetherbeei_contig732:6053..8910+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig732.4.1 ID=mRNA_P-wetherbeei_contig732.4.1|Name=mRNA_P-wetherbeei_contig732.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2858bp|location=Sequence derived from alignment at P-wetherbeei_contig732:6053..8910+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCATACTACGGTAAAGGCGGCGGCGACCGCCGAGGAGGAGACAGCTA CGGGGGAAGCAGAGGCGGCGGGGGCTACGGTGGAGGAGGAGGAGGATTTG GCGGCGGCGGCTTTGGAGGCGGCCGAGGAGGCGGACGCCGCGGCCGGTGA GCCCCTCGCTCGCGACTTGCCCAGATGGCCTGTTGTCTAAGGACCTCCTC AGGGAGTGCTGCGTTGCAAAGGCCCTTTCCTCACAAAATCTTTCACCTTC CACACTCTCTTCTCTTCTCTGCTCCATTCACGCTGTGGTCAATTCTTCGC TTCAGAGACGATGATGGACCTTTCGGCAGCGGTGGTGCGGCTCACCTCGC ACGCATTCACGGGACCGAGGAGGACAAGGTAGCGTCGCTATACTGTGGCT GCCCTTGTTTCCCCTCACGCGTTCCTGTCTAACCGCCGCTGGCACCCGCG CAACACTTGGAACTTCCGCGGCTCTCCCCGGACAAAGCCTTCTTTCCTTA TTACCTCCTTCAACTTTCTCCTCTTGACTGCCGGCGCCTGTGTGGATGGC ACGCCCGCCCAACGCCACGACGGACGGGATGAAACGGGAAAATCGCAAAC CCAAACGGAATCGGAAAACGAACTGCCGCACGCACATGCAGGTGAACTGC CCGTTCTACTACAAGATTGGGGCATGCCGCCACGGCGATCGGTGCTCGCG GCAGCACCACAAGCCGGCATTCTCGCAGACGCTCCTGCTGCAGCACATGT ACCAGAGCCCGACGTCGGCCGTCGTGGCGGCGGGGGGCGACCCCAGTCAG CTCAACGAGGAGGAGCTCGAGGACCAGGTGAGGAAAGGGTTGAGGGTCGC GAAAGCCGCTTTTCCCGGGATAAAGAAACGCGGACCGAAACGCAGGAAAA ACTGACAGCTTCGGGTTTTTTGTTTCTTACCGACCCGTTGTGAAGCGGCT TTTCTTGGTGAGAGAACCAGCGGAGGGAGAACTGAACTGAAAAGTGTATC GAAATTACACACTGGATAGGTTTTACTTGAAAGGGGCTCGCTGTGAAGGC CCGTATGTGTTTATTGTTGATGTGGCGACTCTGGCTTGTTTCGCCAAGGG CGCAGTACGGAGTAGTCGTTGATCGATCTCAATGCCGCTGATTCGCATGC TCCGCATGAATCCCATAGTCCCACCCTTTACCCGGGCTGACGAATGAACG AAATTTTCCATCTCCTTGACTCCTTCTGGTGATGCGCGCCTGCCGACAGT TTGAAGATTTCTACGAGGAGGTGAGGGCGCCAATTCGTCACAACGTCATG ACACCCGCCGTTGTTTTGCTTGTTTGCTCTTTTTTGCATGGCGGGTGGCA GGCGCCGCGTGTGCAAGGACCGGTTTCGTTGTTACAATTTTATGTTTTTT TTGCTAAAACGTATTGCGTTGTACCTCTTTTGAGCTTTCTGCGCAGCCCT TCCGCTGGGTGGACTGCCTATAGTGCCGAGTTCCCGAACGGCTCCTTCTC CAGACGTTCCGTAACTCTCCGTTTCCTGCTTTTTTACTGTGCTCTCTTTA CATCCGTATGTTAGACCTCGAAAACTTTATCCTCCTTTTCTGCCCTTCTG TCCTTCTTGTTCTTTCTGTTTTTTCTCCTGCCTTTCCTGTCATTCTGTTT CTCTTTCTTCTTCCTCTCCCCTGCGCTTTATCTTTTTCCACGAAAAGGTG TATGAGGAGCTGAGCAAGTTCGGACGCATCGACGAGATGAACGTATGCGA CAACCTCGGCGACCACCTCGTCGGCAACATCTACATCAAGTTTTCGGACG AGGAGGACGCCGGCGAGGCGCTGAAGGGGCTCTACGGCCGCTGGTACGCC GGCAGGCCCATCGTGGCCGAGTTCAGCAACGTCACTGACTTTCGCGAGGC CAGGCGCGTTTGCAATAGAGAGTTGTGGAATCGGTCCGAGGGAAGGGGGC AGTGACTCGGTTTGGGCGTTGCTTTGTGGATTCGCGGTGCTCTGTGCTGT TCTGCTGTGCTTTTCCCAAGTGATGGTCCGGGAGGGGGGTATGATGCTGG CGAATGAGAGATACACGTGCCTGAAAGCCTGGCAGCAGTGGTGGCTCTTT TCTGGCAGCTGTTTTGGGTGTTCTGTATCCCAGCCCGACCGCATCCTAAC CACAACCCCGCATTTTTTCTGGTCTCTCCCGCCGCTGTGCTTCTTGCGTT TGGCCATTCTCGTGCCTCTCTACTATGGCGCTTTCGACTGCGGCTTCTCG GCGGGTCGCTTGTGTCTATCGGCGCCCCTGGCGGCTTTGCGGACCTAAGC AGGTGCCGGCAGTACGACGAGGGGACGTGCAACCGCGGCGGCCACTGCAA CTTCATGCATGTGCGCCGCATCTCCAAGTCAGTGCTGCGCTTCCTCGAGC GGCTCGCGCGCAAGCGGGCGCGCGGCGAGCCCGTTAACGAGCCGTCGCGG GAGGAGCGGCGCCGCCGGTCGTCGCGGTCGACGTCCCGCCCGTGAGTTTT CGGTTCTCTTCTTTTCGCTCTTCTTTCTGTTCCTCTTTTGACTCTGGCGC GATGTTCTTTTCTGCACGGCTATGTGCGCGCCTTTTGTGGCCGTCTTCTT TTCTGTTTTCTGGCGATATGTGCGGGCAGATTTTGGACCGTTTGGTCAAC GACTTTCTTCAAAGTGCCTGATTTCTCAACCTCTTCTTCATCACAGCCTT CCTTTCTCACCGGCCGGTTTTGGCAAACCTCTCCTCGTACCTTGCTCTGC CGCCGTCCCGATTTCGGTTTCTCTTTTCCTTCGTGCTGCAGCCGCGACCG AGACCGCGGCGGCCGCGACCGCGATCGGGACCGCGACCGTGACCGCGACC GCGACAGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig732:6053..8910+

>mRNA_P-wetherbeei_contig732.4.1 ID=mRNA_P-wetherbeei_contig732.4.1|Name=mRNA_P-wetherbeei_contig732.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig732:6053..8910+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCATACTACGGTAAAGGCGGCGGCGACCGCCGAGGAGGAGACAGCTA
CGGGGGAAGCAGAGGCGGCGGGGGCTACGGTGGAGGAGGAGGAGGATTTG
GCGGCGGCGGCTTTGGAGGCGGCCGAGGAGGCGGACGCCGCGGCCGAGAC
GATGATGGACCTTTCGGCAGCGGTGGTGCGGCTCACCTCGCACGCATTCA
CGGGACCGAGGAGGACAAGGTGAACTGCCCGTTCTACTACAAGATTGGGG
CATGCCGCCACGGCGATCGGTGCTCGCGGCAGCACCACAAGCCGGCATTC
TCGCAGACGCTCCTGCTGCAGCACATGTACCAGAGCCCGACGTCGGCCGT
CGTGGCGGCGGGGGGCGACCCCAGTCAGCTCAACGAGGAGGAGCTCGAGG
ACCAGTTTGAAGATTTCTACGAGGAGGTGTATGAGGAGCTGAGCAAGTTC
GGACGCATCGACGAGATGAACGTATGCGACAACCTCGGCGACCACCTCGT
CGGCAACATCTACATCAAGTTTTCGGACGAGGAGGACGCCGGCGAGGCGC
TGAAGGGGCTCTACGGCCGCTGGTACGCCGGCAGGCCCATCGTGGCCGAG
TTCAGCAACGTCACTGACTTTCGCGAGGCCAGGCGCGTTTGCAATAGAGA
GTGCCGGCAGTACGACGAGGGGACGTGCAACCGCGGCGGCCACTGCAACT
TCATGCATGTGCGCCGCATCTCCAAGTCAGTGCTGCGCTTCCTCGAGCGG
CTCGCGCGCAAGCGGGCGCGCGGCGAGCCCGTTAACGAGCCGTCGCGGGA
GGAGCGGCGCCGCCGGTCGTCGCGGTCGACGTCCCGCCCCCGCGACCGAG
ACCGCGGCGGCCGCGACCGCGATCGGGACCGCGACCGTGACCGCGACCGC
GACAGA
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