mRNA_P-wetherbeei_contig7295.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A7S3XXW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXW5_HETAK) HSP 1 Score: 124 bits (310), Expect = 5.090e-30 Identity = 58/125 (46.40%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 580 GQNSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 954
G N+D CE C + ++ ++ + F V+VC +C+ ND+Y L+ K +V ++ LPEGTI VL F+ K+NPRHG+W MKL+L+K+V+KYS +RWGG EGL ERRRR+ + ++K+T + KK
Sbjct: 2 GINTDSCEACRE-DSELNETFYQRFQVSVCNQCKISNDDYKLITKAEVVQMFCLPEGTIQVLDFIEKENPRHGTWTPMKLFLQKQVKKYSHDRWGGLEGLLQERRRRDEKKLKNALKRTSGLLKK 125
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: D7FX65_ECTSI (XPA_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX65_ECTSI) HSP 1 Score: 123 bits (308), Expect = 7.450e-30 Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 628 IDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 954
+D L +AF ++VC C+ +E+ V KDV YLLP+GTI+VL F+ +DNP H SW KMKLYLR+EV YS +RWG +GL AERRRRE Y+RS+ +TK IFK+
Sbjct: 1 MDKELLEAFGISVCRTCKMSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKR 109
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A6H5KUI3_9PHAE (XPA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI3_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.910e-29 Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 598 CEVCG--DPNAPIDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 954
CE CG +A +D L +AF ++VC C+ +E+ V KDV YLLP+GTI+VL F+ +DNP H SW KMKLYLR+EV YS RWG +GL AERRRRE Y+RS+ +TK IFK+
Sbjct: 172 CEGCGGEQDDARMDKELLEAFGISVCRTCKMSREEFQYVTTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYRRWGSEDGLAAERRRRESLKYDRSLARTKGIFKR 292
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A835ZE73_9STRA (XPA_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE73_9STRA) HSP 1 Score: 109 bits (273), Expect = 6.630e-24 Identity = 54/123 (43.90%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 595 VCEVCG-----DPNAPIDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIF 948
VCE CG DP +D +L +AF VAVC C+ + Y L+ K DV ++LLPEGTI VL ++ ++NPR+ W M+LYL K+ ++ +RW E L+ ER+RR+ +E SVK+TK +F
Sbjct: 63 VCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVF 185
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A4D9D9F3_9STRA (XPA_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9F3_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.340e-22 Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 598 CEVCGDPNAPIDVRLWDAFTVAVCARCRTDNDE-YGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 954
CEVCG + +D D F + VC C+ +N+E YGLV K D +LL EGT+ V+P+L ++NPR+ + KMKLY R+ + + ERW GPEGL ER RR YE ++ KT +F K
Sbjct: 104 CEVCG--SGLVDPMYHDVFRITVCTPCKNNNEEEYGLVTKGDAVAEFLLQEGTMRVMPYLERNNPRNTKYQKMKLYCRRLLRAKAYERWDGPEGLAEERNRRRERRYESAIDKTLNVFTK 221
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A7S3PXE3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE3_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.370e-16 Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 706 VPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 954
V K+D G Y LP+GT+ V + KDNPR WNKMKLY R E+ + + +RWGG EGL ERRRRE+ E+ + + R+FKK
Sbjct: 86 VTKQDAKGKYCLPDGTLEVCEYTEKDNPRQSKWNKMKLYNRSEIRRRARDRWGGLEGLQEERRRRENKRSEKDMAEGYRLFKK 168
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A168NEF3_ABSGL (XPA_C domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168NEF3_ABSGL) HSP 1 Score: 86.7 bits (213), Expect = 2.870e-15 Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 598 CEVCGDPNAPIDVRLWDAFTVAVCARCRTDN-DEYGLVPKKDVAGVYLLPEGTIS---VLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTK 939
C+ C N +D + F + VCA C+ D+Y L+ K + YLL + + +LP K NPR +WN M LY+R+ VE Y+ ++WGGPEGLDAE RRE E+ KK K
Sbjct: 106 CKECDSTN--VDTVFYQVFNICVCADCKEKYPDKYSLITKTEAREDYLLTDPELKDKDLLPHWSKPNPRKSTWNNMMLYVREMVEDYAFQKWGGPEGLDAEYERRESQKKEKXDKKFK 221
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A1E3NYT0_WICAA (XPA_C domain-containing protein n=1 Tax=Wickerhamomyces anomalus (strain ATCC 58044 / CBS 1984 / NCYC 433 / NRRL Y-366-8) TaxID=683960 RepID=A0A1E3NYT0_WICAA) HSP 1 Score: 86.3 bits (212), Expect = 1.080e-14 Identity = 50/121 (41.32%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 583 QNSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTD-NDEYGLVPKKDVAGVYLLPEGTI---SVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKK 933
+N+ C CG + ++ +L+D F VC RC D D+Y L+ K + Y L + + S+LP + K NP HG++N+M+LYLR +VEK++ ++WGG EGLDAE +RRE +R KK
Sbjct: 171 ENAIKCYECG--SFELNQKLYDVFKCRVCKRCEKDIPDKYSLLTKTECREDYFLTDPELRDDSILPHMEKPNP-HGTFNRMQLYLRYQVEKFAFKKWGGAEGLDAEWQRREEQKIKRRDKK 288
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A0H5C2R2_CYBJN (XPA_C domain-containing protein n=2 Tax=Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) TaxID=983966 RepID=A0A0H5C2R2_CYBJN) HSP 1 Score: 83.2 bits (204), Expect = 9.490e-14 Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 1
Query: 586 NSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTDN-DEYGLVPKKDVAGVYLLPEGTI---SVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKK 933
N+ C CG ID +LW+ F VC RC N D+Y L+ K + Y L + + S+L L K NP H +N+M+L+LR +VE+++ ++WGGPEGLDAE +RRE +R KK
Sbjct: 153 NATKCFECG--TFEIDQQLWEVFKCRVCKRCAKANPDKYSLLTKTECREDYFLTDPELEDQSLLHRLFKPNP-HSKFNRMQLFLRYQVEEFAFQKWGGPEGLDAEWQRREEFKVKRREKK 269
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: K0KI80_WICCF (DNA repair protein n=1 Tax=Wickerhamomyces ciferrii (strain ATCC 14091 / BCRC 22168 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031 F-60-10) TaxID=1206466 RepID=K0KI80_WICCF) HSP 1 Score: 82.8 bits (203), Expect = 1.680e-13 Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 583 QNSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTD-NDEYGLVPKKDVAGVYLLPEGTI---SVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFK 951
+N+ C CG + ++++L++ F VC RC + D+Y L+ K + Y L + + S+LP + K NP HG++N+M+LYLR +VE+++ ++WGGPEGLDAE +RRE +R +K ++ K
Sbjct: 180 ENAPKCFECG--SFELNMKLFEHFKCRVCKRCEKNIPDKYSLLTKTESREDYFLTDPELRDESILPHMEKPNP-HGTFNRMQLYLRYQVEEFAFKKWGGPEGLDAEWQRREEFKVKRRDQKYEKKMK 303 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7295.2.1 >prot_P-wetherbeei_contig7295.2.1 ID=prot_P-wetherbeei_contig7295.2.1|Name=mRNA_P-wetherbeei_contig7295.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp MASTELTEEQRQRIEANRRRALELQKKCRVEHLAASPAASPAASSKSGGSback to top mRNA from alignment at P-wetherbeei_contig7295:1560..3130- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7295.2.1 ID=mRNA_P-wetherbeei_contig7295.2.1|Name=mRNA_P-wetherbeei_contig7295.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1571bp|location=Sequence derived from alignment at P-wetherbeei_contig7295:1560..3130- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7295:1560..3130- >mRNA_P-wetherbeei_contig7295.2.1 ID=mRNA_P-wetherbeei_contig7295.2.1|Name=mRNA_P-wetherbeei_contig7295.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig7295:1560..3130- (Phaeothamnion wetherbeei SAG_119_79)back to top |