mRNA_P-wetherbeei_contig729.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: D8LGM2_ECTSI (20S proteasome alpha subunit G n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM2_ECTSI) HSP 1 Score: 150 bits (379), Expect = 3.820e-37 Identity = 73/143 (51.05%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 307 TADDLYDS-PNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASY 732
+A+ YDS VFSP+GRL QL+Y E +VK+GNLCIG C DG VL KL ++ A L+ + G+ R++ VD HIG++ AGLPADGRALA A E R+HRREYGEPI ++LA+++ +H+ ++W R YPNAL +A +
Sbjct: 27 SAESAYDSNKGVFSPKGRLVQLDYVEGLVKRGNLCIGAECKDGVVLMTNKLVTADAAKLLVDGGT-RRVFRVDSHIGILPAGLPADGRALAHKAMEYCRSHRREYGEPIPGRLLAERLGEFIHAACVRWGSRAYPNALFVACW 168
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: A0A835ZBF0_9STRA (Nucleophile aminohydrolase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF0_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.160e-33 Identity = 97/260 (37.31%), Postives = 135/260 (51.92%), Query Frame = 1
Query: 259 AALPLCLVLSRGAAHPTADDLYDSP-NVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPA----GITCGEAVSQIAAL 1023
AAL CL AA AD YD NVFSPQG+L Q EYA V +G C+G+SCSDG VLA++KL+ ++ +L E S RIY V +G++ AGL ADGR + A EL R HR YGEP++ +VLA Q+ LH SL+ RP + L+A D +E AG+G S + L++V SG + ACC+G + V + +W+ G+TC +A+S++A+L
Sbjct: 3 AALLSCLCSHATAA--IADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPER-STRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEE--AGQGDRSSAQQAA--------------------AAAAELWLVDVSGDVQGYVACCVGQHAEAV---MERWRTNKYMFDGVTCRQALSEVASL 234
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: A0A067BVI4_SAPPC (PROTEASOME_ALPHA_1 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BVI4_SAPPC) HSP 1 Score: 132 bits (333), Expect = 1.970e-32 Identity = 82/244 (33.61%), Postives = 127/244 (52.05%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP GR+ Q+EYA++ V+ IG+ C+DG V+ V+K+ LS++ G+ R++ +DRHIGL AGL ADGR L A E A +++ YG PI QVLAD+M+ ++H +L + RP+ ++++A DV G C N V++ SGVS+R+R C +G G +T++ K+K +TC EA+ IA + L + ++
Sbjct: 8 YDLSVGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLV----PGTHRRVHAIDRHIGLAMAGLVADGRQLVNRAREEASGYKKNYGSPIPPQVLADRMSQYVHYFTLYGSVRPFGTSIMLAGRDV-------------------------------------DTGKCYLN--VIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKI-FDMTCREAIKYIAKILNVLHDEVK 207
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: K3W7I2_GLOUD (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7I2_GLOUD) HSP 1 Score: 130 bits (328), Expect = 1.110e-31 Identity = 78/244 (31.97%), Postives = 124/244 (50.82%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP GR+ Q+EYA++ V+ IG+ C+DG ++ V+K LS++ G+ R+Y +DRH+GL AGL ADGR L A E A ++++ YG I VLAD+M ++H +L + RP+ ++++A YD ++ S LY V+ SGV++ +R C IG G +T++ K+K +TC EA+ +A + L + +R
Sbjct: 8 YDLSAGTFSPDGRIFQVEYAKKAVENSGTAIGIKCTDGIIMGVEKTLLSKMLVA----GTHRRVYAIDRHVGLSMAGLVADGRQLVNRAREEALSYKKNYGSAIPPHVLADRMGQYVHYYTLYGSIRPFGTSIMLAGYDADEKKPS---------------------------------------LYCVEPSGVTYSYRGCAIGKGQQAAKTEIEKYKL-FDMTCREAMKYVAKILHTLHDEVR 207
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: H3G9D2_PHYRM (PROTEASOME_ALPHA_1 domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G9D2_PHYRM) HSP 1 Score: 130 bits (328), Expect = 1.140e-31 Identity = 80/244 (32.79%), Postives = 128/244 (52.46%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP+GR+ Q+EYA++ V+ IG+ C+DG ++ V+K LS++ G+ R+Y +DRH+GL AGL ADGR L A E A +R+ YG I Q+LA++M +H +L + RP+ A+++A YD +D + +S+LYVV+ SGV++ +R C +G G +T++ K+K +TC EA+ +A + L + +R
Sbjct: 8 YDYSAGTFSPEGRIFQVEYAKKAVENSGTTIGIKCTDGIIMGVEKTLLSKMLV----PGTHRRVYAIDRHVGLSMAGLVADGRQLVNRAREEALNYRKNYGCSIPPQLLAERMGQFVHYYTLYGSIRPFGTAIMLAGYD---QDTN------------------------------------KSSLYVVEPSGVTYSYRGCALGKGQQSAKTEIEKYKL-FDMTCREAMKYVAKILNTLHDEVR 207
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: A0A1W0AAI8_9STRA (Proteasome subunit alpha type-3 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0AAI8_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.040e-31 Identity = 81/244 (33.20%), Postives = 126/244 (51.64%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP GR+ Q+EYA++ V+ IG+ C+DG V+ V+K+ LS++ G+ RI+ VDRH+GL AGL ADGR L A E A +++ YG I Q+LAD+M+ ++H +L + RP+ ++++A DV G C N V++ SGVS+R+R C +G G +T++ K+K +TC EA+ IA + L + ++
Sbjct: 8 YDLSAGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLV----PGTHRRIHAVDRHVGLAMAGLVADGRQLVNRAREEASGYKKNYGSAIPPQILADRMSQYVHYFTLYGSVRPFGTSIMLAGRDV-------------------------------------DTGKCYLN--VIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKI-FDMTCREAIKYIAKILNVLHDEVK 207
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: A0A6A3SMG4_9STRA (PROTEASOME_ALPHA_1 domain-containing protein (Fragment) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3SMG4_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.010e-31 Identity = 80/244 (32.79%), Postives = 128/244 (52.46%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP+GR+ Q+EYA++ V+ IG+ C+DG ++ V+K LS++ L G+ RIY +DRH+GL AGL ADGR L A E A +R+ YG I +LA++M +H +L + RP+ A+++A YD +D + +S+LY+V+ SGV++ +R C +G G +T++ K+K +TC EA+ +A + L + +R
Sbjct: 34 YDYSAGTFSPEGRIFQVEYAKKAVENSGTTIGIKCTDGIIMGVEKTLLSKMLVL----GTHRRIYAIDRHVGLSMAGLVADGRQLVNRAREEALNYRKNYGCSIPPHLLAERMGQFVHYFTLYGSIRPFGTAIMLAGYD---QDAN------------------------------------KSSLYMVEPSGVTYSYRGCALGKGQQSAKTEIEKYKL-FDMTCREAMKYVAKILNTLHDEVR 233
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: A0A024GPT3_9STRA (PROTEASOME_ALPHA_1 domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GPT3_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.880e-29 Identity = 78/244 (31.97%), Postives = 122/244 (50.00%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP GR+ Q+EYA++ V+ IG+ CSDG ++ V+K +S++ G+ RI+ VD HIG+ AGL ADGR L A E A +++ YG PI VLAD+M ++H +L + RP+ ++IA YD +DE+ + LY ++ SGV+ +R C +G G +T++ K+K + C EA+ +A + L + +R
Sbjct: 7 YDLSAGTFSPDGRIFQVEYAKKAVENSGTTIGIKCSDGVIIGVEKKLVSKMLVT----GTHRRIFAVDHHIGVSMAGLVADGRQLVNRAREEALNYKKNYGSPIPPHVLADRMGQYIHYYTLYGSVRPFGATIMIAGYD---QDEN------------------------------------QHKLYQIEPSGVTFSFRGCAMGKGEQAAKTEIEKYKL-FDLPCREAMKYVAKILNVLHDELR 206
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: A0A6A3N6M9_9STRA (Purple acid phosphatase n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N6M9_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.390e-28 Identity = 79/244 (32.38%), Postives = 127/244 (52.05%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP+GR+ Q+EYA++ V+ IG+ C+DG ++ V+K LS++ G+ RIY +DRH+GL AGL ADGR L A E A +R+ YG I +LA++M +H +L + RP+ A+++A YD +D + +S+LY+V+ SGV++ +R C +G G +T++ K+K +TC EA+ +A + L + +R
Sbjct: 722 YDYSAGTFSPEGRIFQVEYAKKAVENSGTTIGIKCTDGIIMGVEKTLLSKMLV----PGTHRRIYAIDRHVGLSMAGLVADGRQLVNRAREEALNYRKNYGCSIPPHLLAERMGQFVHYYTLYGSIRPFGTAIMLAGYD---QDAN------------------------------------KSSLYMVEPSGVTYSYRGCALGKGQQSAKTEIEKYKL-FDMTCREAMKYVAKILNTLHDEVR 921
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Match: A0A3R7NM45_9STRA (PROTEASOME_ALPHA_1 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NM45_9STRA) HSP 1 Score: 126 bits (317), Expect = 8.810e-28 Identity = 78/244 (31.97%), Postives = 126/244 (51.64%), Query Frame = 1
Query: 322 YD-SPNVFSPQGRLRQLEYAEEVVKKGNLCIGVSCSDGAVLAVQKLTLSEIATLIGEEGSGHRIYPVDRHIGLIAAGLPADGRALARCANELARAHRREYGEPIAAQVLADQMAAHLHSTSLQWNKRPYPNALLIASYDVLDEDESCAGKGVGSGGXXXXXXXXXXXXXXXXXXXXXXXGGCRSNLYVVQTSGVSHRWRACCIGLGSAEVRTQLVKWKAPAGITCGEAVSQIAALARQLPEGMR 1050
YD S FSP+GR+ Q+EYA + V+ IG+ C+DG ++ V+K LS++ G+ RIY +DRHIGL AGL ADGR L A E A +++ YG I +L+++M +H +L + RP+ A+++A YD +DE +++LY+V+ SGV++ +R C +G G +T++ K+K +TC EA+ +A + L + +R
Sbjct: 475 YDYSAGTFSPEGRIFQVEYARKAVENSGTTIGIKCTDGIIMGVEKTLLSKMLV----PGTHRRIYAIDRHIGLSMAGLVADGRQLVNRAREEALNYKKNYGCSIPPHLLSERMGQFVHYYTLYGSIRPFGTAIMLAGYD---QDEK------------------------------------KTSLYMVEPSGVTYSYRGCALGKGQQSAKTEIEKYKI-FDMTCREAMKYVAKILNTLHDEVR 674 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig729.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig729.3.1 >prot_P-wetherbeei_contig729.3.1 ID=prot_P-wetherbeei_contig729.3.1|Name=mRNA_P-wetherbeei_contig729.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=350bp MKRSSRTRRRPWNWTGFAALPLCLVLSRGAAHPTADDLYDSPNVFSPQGRback to top mRNA from alignment at P-wetherbeei_contig729:6083..7356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig729.3.1 ID=mRNA_P-wetherbeei_contig729.3.1|Name=mRNA_P-wetherbeei_contig729.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1274bp|location=Sequence derived from alignment at P-wetherbeei_contig729:6083..7356+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig729:6083..7356+ >mRNA_P-wetherbeei_contig729.3.1 ID=mRNA_P-wetherbeei_contig729.3.1|Name=mRNA_P-wetherbeei_contig729.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1050bp|location=Sequence derived from alignment at P-wetherbeei_contig729:6083..7356+ (Phaeothamnion wetherbeei SAG_119_79)back to top |