mRNA_P-wetherbeei_contig729.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig729.2.1
Unique NamemRNA_P-wetherbeei_contig729.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: D8LKZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ1_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 3.370e-73
Identity = 198/561 (35.29%), Postives = 253/561 (45.10%), Query Frame = 1 
Query:  259 SFERNEILRCLPGEKKIEGGVLVHLLR--GGWAFKSKGNLEVLEPVSPPKSVTGFWAYRVTAPNGMRFAPTSDFAAATAGAGTPSRLTLVGAGDVVTARRKLCPSGGGPVAVQLDDGLGWLFESQQDGELLD-SLDGACPVEKVSPALREEGPFWYGVVHTSGAVLLEGPDTEGPDLLEMFLFRKLFEASERYRPPGEETVYLKLAGRPGWVVQRYE--GTEMCAEEEPPADELLYNSWWRVVYPGGVRVRLRP--ELLGGMTGQVLLCGQFFRAIRRVKGPGDDQVSFLLVDARGL---------------GGGXXXGRWDGSXXXXXEGAANAATLLNGAXXXXXXXXXXXXXRLPPDSVGWVPVNRRDLEVVAPVEEPRVARGLFAYQVVVEESLPARVGPHDLAPEMAQELPPFSVAAVTQVVETADGAEGYVELRDSRGWVRFRHGDDDVRMERLPGFPRVDKAPRDFVVVAEAGAPARVGPSAAAATTGEVLQCGERVTAAMSWVV---PPVSGKGEPSAFLLIRGKGWVVAGTG---EGPVLEEIVTESPLA*P 1857
            SF   +++        +  GV+V L +   G+ F+  G+  +LE V   K   G W YRV  P G RFA             TP     V    VV A R+  P G     V+L D  GW+ ES ++  +L+ S DG   VE ++   R++   WY VV  SG  LLE PD     +LE+FL  K F  SER++PP + + +LK+ GR  WVVQR E  G E C +  PP DE +   W+RV YPGGVR+R  P  E      G VL+CG  F A RR + PG   +   +    G+               G       WD       E A   A                          GWVP      EVV                  V+E+L A  GPH  AP   Q+LPP+SVAA    +ET DG EG+V+L  +  WV  R G  D +M RLP FPRVDK PR FVV A  G    VGPS +A  TG++L  G   ++ M W V   P   G G+   F+L+ G GWV    G   EG  L EI    P   P
Sbjct:   79 SFGFGDVVEVRGLAVAVPEGVVVELKQPQSGFVFQKHGDRTLLEEVEALKVEEGDWWYRVVHPAGARFAKIPSLLPQ-----TPRHTIAVPQNTVVHACRRHTPPGSSVTFVELSDNKGWIVESTKEKAVLEQSSDGKYMVENITGHYRDDSEAWYQVVDESGVELLEAPDAGSTRMLELFLPGKAFCVSERFQPPEQGSTFLKVKGREAWVVQRAESDGEEACKKLPPPMDEAV-EQWYRVQYPGGVRLRASPAFEHTDPSLG-VLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSSSEYGETVDVYGSSSDDSDWDNEDEL--EQARRGARR----------------------HCGWVPSTSNGEEVV------------------VDETLLANTGPHVNAPGSPQQLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVLSRRG-QDTKMVRLPAFPRVDKTPRRFVVSAPGGVETVVGPSPSAPRTGQLLPLGAEGSSEMVWSVKGWPGDRGVGD-RRFVLLEGMGWVQLDAGTEQEGGPLREIGAPPPXXQP 588
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A833H8X9_9HYPH (Peptide chain release factor 2 n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=A0A833H8X9_9HYPH)

HSP 1 Score: 65.9 bits (159), Expect = 2.950e-9
Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = -3 
Query: 2208 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAAL 2324
            RSYV+ PY+MVKDHRTGQETG+V AVL G+L+PF+EA L
Sbjct:   63 RSYVMQPYRMVKDHRTGQETGNVEAVLDGNLEPFIEAYL 101
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A7V2TNK9_9BACT (Peptide chain release factor 2 n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2TNK9_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 4.970e-9
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = -3 
Query: 2208 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAAL 2324
            RSYVL PYQM+KDHRTG ETG+V  VL GDLD FVEA L
Sbjct:   15 RSYVLHPYQMIKDHRTGVETGNVTKVLDGDLDMFVEAYL 53
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A2J6J2W2_9DELT (Peptide chain release factor 2 n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2J6J2W2_9DELT)

HSP 1 Score: 69.7 bits (169), Expect = 7.080e-9
Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = -3 
Query: 2199 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVAG 2324
            RSYVL PY+MVKDHRTGQETG+  AVL G+LDPFVEA L++G
Sbjct:  322 RSYVLHPYRMVKDHRTGQETGNTDAVLDGELDPFVEAYLLSG 363
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A7C2J730_9BACT (Peptide chain release factor 2 n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7C2J730_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 9.690e-9
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = -3 
Query: 2208 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAAL 2324
            RSYVLAPYQMVKDHRTG+ETG+V AVL GDLD F+EA L
Sbjct:  322 RSYVLAPYQMVKDHRTGEETGNVTAVLDGDLDRFIEAYL 360
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A7C5QI36_9BACT (RF_PROK_I domain-containing protein n=1 Tax=Candidatus Acetothermia bacterium TaxID=2053493 RepID=A0A7C5QI36_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 9.700e-9
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = -3 
Query: 2208 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAAL 2324
            RSYVL PY+MVKDHRTG+ETGDV +VL GDLD F+EA L
Sbjct:  102 RSYVLHPYRMVKDHRTGEETGDVDSVLDGDLDRFIEAFL 140
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A661JL67_9DELT (Peptide chain release factor 2 (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661JL67_9DELT)

HSP 1 Score: 63.5 bits (153), Expect = 1.280e-8
Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = -3 
Query: 2199 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVAG 2324
            RSYVL PY++VKDHRTG E GD   VL GDLDPF+EA L  G
Sbjct:   59 RSYVLHPYKLVKDHRTGLERGDAERVLDGDLDPFIEAYLFEG 100
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A3N5JE47_9PROT (Peptide chain release factor 2 n=1 Tax=Zetaproteobacteria bacterium TaxID=2026807 RepID=A0A3N5JE47_9PROT)

HSP 1 Score: 68.6 bits (166), Expect = 1.830e-8
Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = -3 
Query: 2208 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAAL 2324
            RSYVLAPYQ+VKDHRTG+ETG+V+AVL GDLD F+EA L
Sbjct:  321 RSYVLAPYQLVKDHRTGEETGNVSAVLDGDLDRFIEAFL 359
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A7C3XZS7_9BACT (Peptide chain release factor 2 n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C3XZS7_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 5.810e-8
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = -3 
Query: 2202 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVA 2324
            RSYVL PY++VKDHRT  ETG+  AVL GD++PF++AAL A
Sbjct:   36 RSYVLHPYRLVKDHRTDYETGNADAVLDGDIEPFIKAALKA 76
[Close]
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Match: A0A3M1M7T8_9CHLR (Peptide chain release factor 2 n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1M7T8_9CHLR)

HSP 1 Score: 66.6 bits (161), Expect = 7.090e-8
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = -3 
Query: 2202 RSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVA 2324
            RSYVL PYQMVKDHRTG ETG+ AAVL G LDPF+EA L A
Sbjct:  321 RSYVLHPYQMVKDHRTGYETGNTAAVLDGALDPFIEAYLRA 361
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig729.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ1_ECTSI3.370e-7335.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A833H8X9_9HYPH2.950e-974.36Peptide chain release factor 2 n=1 Tax=Rhizobiacea... [more]
A0A7V2TNK9_9BACT4.970e-976.92Peptide chain release factor 2 n=1 Tax=Candidatus ... [more]
A0A2J6J2W2_9DELT7.080e-976.19Peptide chain release factor 2 n=1 Tax=Desulfuromo... [more]
A0A7C2J730_9BACT9.690e-982.05Peptide chain release factor 2 n=1 Tax=candidate d... [more]
A0A7C5QI36_9BACT9.700e-976.92RF_PROK_I domain-containing protein n=1 Tax=Candid... [more]
A0A661JL67_9DELT1.280e-869.05Peptide chain release factor 2 (Fragment) n=1 Tax=... [more]
A0A3N5JE47_9PROT1.830e-879.49Peptide chain release factor 2 n=1 Tax=Zetaproteob... [more]
A0A7C3XZS7_9BACT5.810e-865.85Peptide chain release factor 2 n=1 Tax=bacterium T... [more]
A0A3M1M7T8_9CHLR7.090e-878.05Peptide chain release factor 2 n=1 Tax=Chloroflexi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig729contigP-wetherbeei_contig729:1610..5872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2551
Hectar predicted targeting categoryother localisation
Exons7
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-11_006090.1
Cds size1698
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig729.2.1prot_P-wetherbeei_contig729.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig729 2307..5716 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186970.4552777-UTR-P-wetherbeei_contig729:1609..23061683186970.4552777-UTR-P-wetherbeei_contig729:1609..2306Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig729 1610..2306 -
1683186970.5338414-UTR-P-wetherbeei_contig729:5716..58721683186970.5338414-UTR-P-wetherbeei_contig729:5716..5872Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig729 5717..5872 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186970.4661937-CDS-P-wetherbeei_contig729:2306..25171683186970.4661937-CDS-P-wetherbeei_contig729:2306..2517Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 2307..2517 -
1683186970.476146-CDS-P-wetherbeei_contig729:2771..29471683186970.476146-CDS-P-wetherbeei_contig729:2771..2947Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 2772..2947 -
1683186970.4858975-CDS-P-wetherbeei_contig729:3367..38021683186970.4858975-CDS-P-wetherbeei_contig729:3367..3802Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 3368..3802 -
1683186970.4952722-CDS-P-wetherbeei_contig729:4080..42741683186970.4952722-CDS-P-wetherbeei_contig729:4080..4274Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 4081..4274 -
1683186970.504866-CDS-P-wetherbeei_contig729:4513..46731683186970.504866-CDS-P-wetherbeei_contig729:4513..4673Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 4514..4673 -
1683186970.5147638-CDS-P-wetherbeei_contig729:5016..52921683186970.5147638-CDS-P-wetherbeei_contig729:5016..5292Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 5017..5292 -
1683186970.524676-CDS-P-wetherbeei_contig729:5470..57161683186970.524676-CDS-P-wetherbeei_contig729:5470..5716Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 5471..5716 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig729.2.1

>prot_P-wetherbeei_contig729.2.1 ID=prot_P-wetherbeei_contig729.2.1|Name=mRNA_P-wetherbeei_contig729.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=566bp
MAVETEDVQYWRVAYHGGIAIRDDPEKPAGPDAPSFERNEILRCLPGEKK
IEGGVLVHLLRGGWAFKSKGNLEVLEPVSPPKSVTGFWAYRVTAPNGMRF
APTSDFAAATAGAGTPSRLTLVGAGDVVTARRKLCPSGGGPVAVQLDDGL
GWLFESQQDGELLDSLDGACPVEKVSPALREEGPFWYGVVHTSGAVLLEG
PDTEGPDLLEMFLFRKLFEASERYRPPGEETVYLKLAGRPGWVVQRYEGT
EMCAEEEPPADELLYNSWWRVVYPGGVRVRLRPELLGGMTGQVLLCGQFF
RAIRRVKGPGDDQVSFLLVDARGLGGGGGGGRWDGSGGDAWEGAANAATL
LNGAAAGAAAAAAAAAARLPPDSVGWVPVNRRDLEVVAPVEEPRVARGLF
AYQVVVEESLPARVGPHDLAPEMAQELPPFSVAAVTQVVETADGAEGYVE
LRDSRGWVRFRHGDDDVRMERLPGFPRVDKAPRDFVVVAEAGAPARVGPS
AAAATTGEVLQCGERVTAAMSWVVPPVSGKGEPSAFLLIRGKGWVVAGTG
EGPVLEEIVTESPLA*
back to top

mRNA from alignment at P-wetherbeei_contig729:1610..5872-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig729.2.1 ID=mRNA_P-wetherbeei_contig729.2.1|Name=mRNA_P-wetherbeei_contig729.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4263bp|location=Sequence derived from alignment at P-wetherbeei_contig729:1610..5872- (Phaeothamnion wetherbeei SAG_119_79)
CTGAGCGTGTTTCTTGTGCGTATTAAAGAAGCAAAATCATCCCGACTCTC
CCTCCACGCTCCAGTTGCGTGCAGATTCGGCTTAGGAAAAGGGCTAGAGG
TGGGAGCTCTCTTTCTCTGCCAGAGAGCGAGCTTTCCATCTCTCAACTCT
CCAGGAATGGCTGTTGAGACGGAAGATGTGCAGTATTGGCGTGTAGCGTA
TCATGGAGGGATTGCAATTCGCGACGATCCAGAGAAACCTGCGGGCCCGG
ATGCGCCAAGCTTTGAACGCAACGAGATCCTGCGTTGCCTTCCAGGAGAA
AAGAAAATCGAAGGTGGCGTATTGGTCCATCTACTTCGAGGCGGCTGGGC
CTTCAAGTCGAAGGGAAATCTCGAAGTTCTCGAACCCGTCAGCCCACCAA
AGGTGACCCTTCTCCCCCCCCCCCCTTCCACCAAAATGAAATGTGTGCTT
TGAACACGCAAACGCTCCTGAGAACTTCTATGTTCCATGTTTGGTCGATC
CTGACATTTCCCCATGCATCCAACATTGCAGCCCTCTGCTGCGCTCCCAT
TGCGCGGTCTTTCTTGCCAAACCGAATCAGTCCGTGACTGGCTTTTGGGC
ATATCGCGTCACTGCGCCAAACGGGATGCGCTTTGCGCCAACATCCGACT
TTGCGGCGGCGACCGCGGGCGCTGGCACGCCGTCGCGCCTGACATTGGTG
GGAGCCGGCGACGTCGTGACGGCGCGGCGAAAGCTGTGCCCATCAGGCGG
CGGCCCCGTGGCGGTGCAACTGGATGACGGGCTGGGGTGGCTTTTCGAGT
CGCAGCAGGATGGCGAGCTTTTGGACAGCCTTGACGGAGCCTGCCCGGTG
GAAAAAGTGGGCGGAAGGCGGATTGGGAAGGGTGACGGTAGTAACGGCGG
TGATGGCAGCAGCATTCGGAGCAGTGGTGGCGGTTTTTTCTGATTCACTT
GTTGGTAATTTGTCAGGCAACGGTAGCATTACTAACGCCAGGTCTCTTGT
TTTTGCCTTTTGACGGGATTTGTTTCCTTCAAAAAGCAAGTGGCCTTGCT
AACTGGACGCCTTGCGATGTTTGTGAAGTAGTTTCTTAGTCGACGCTTTG
TCTTTGTGATCTTGGCATTCTGGCCTGATTTTTTCTCGCATCGATTGGAT
ACCTGTCTTCGCCAAACCCAAAATCAATCCATCCTCTGCTGCCCGGCAGG
TCTCGCCGGCGCTGCGGGAGGAAGGACCGTTCTGGTACGGCGTGGTGCAC
ACATCGGGAGCAGTGCTGCTGGAAGGGCCTGATACGGAGGGTCCAGACCT
TCTGGAGATGTTTCTGTTCAGGAAGCTCTTTGAGGCCTCGGAGCGCTACC
GGCCGCCAGGTAAGTAGACGTCTTCTTAGTTGAAAAGCAAAGCTCTGGCC
TTCTAAGGGTGGCCGGGCGAGGCGTCGTCTTACGGGGTAATGTGGTATCT
GATGGAAGCGGGGAGAAGAGAGGAGGGGTGCATTCCATCCACCGTTCAGG
TTCCCTGCCGTGCGGACTTAAGTATCACAGCATTTACGGTTCCCAACAAC
ATGCCGGCCCCGTTTCCCGCCGTTGCAACTGACTGACCGACCGACCAGGC
GAGGAGACCGTCTACCTCAAGCTGGCGGGGCGGCCCGGCTGGGTGGTGCA
GCGCTACGAGGGCACGGAGATGTGCGCTGAGGAGGAGCCGCCGGCGGACG
AGCTGCTCTACAACAGCTGGTGGCGCGTGGTCTATCCGGGCGGAGTGCGG
GTGCGGCTGCGGCCCGAGCTGCTCGGGGGCATGACTGGCCAGGTAAATGA
GAGGGTGGGGTTTGGGGTGCGGGACAGAGGAGCAGTGACGGGAGGCGGGA
ACCAGCTTTGTTCCTTTTGCAGATGCCTCGTGGTCGCGGGCATTCGGCCA
GCTGCTTTTGGGAGGGGAGGGCCAAGTTCTATTGCTGATTTCGGAGGATG
ATGGTGCAGCCCTTTGTGCAAAGAACGAAAGAGGTTCAGCCGCATCTCGG
CACAAGCATCGTTGAAAAGTGCTGTTCTGTTTTGCTTCCTGAAATTCGAC
CGTCCACCTGGATCCGACAGGTCCTACTCTGCGGGCAGTTCTTCCGCGCG
ATCCGAAGGGTCAAGGGCCCCGGCGACGACCAAGTCAGCTTTCTGCTGGT
CGACGCCCGCGGCCTCGGCGGCGGCGGTGGCGGCGGCCGATGGGACGGCA
GCGGCGGCGATGCGTGGGAGGGCGCCGCCAACGCCGCCACCCTCCTCAAC
GGCGCCGCCGCCGGCGCTGCCGCCGCGGCCGCGGCCGCTGCAGCGAGGCT
GCCGCCGGATAGCGTAGGTTGGGTGCCAGTGAACCGGCGGGACTTGGAGG
TGGTGGCGCCGGTAGAGGAACCGCGTGTTGCACGTGGGCTATTCGCCTAC
CAGGTGGTGGTGGAGGAGAGCCTGCCGGCGCGGGTTGGGCCGCACGATCT
GGCACCGGAGATGGCGCAGGAGCTGCCGCCGTTCAGCGTCGCCGCCGTCA
CGCAGGTGAGAGAGGAGAGCAGCTTGGCAGTTTTTGGTTGCTTTCCTGTT
TCTTTCTTGTTTTTGCCGCAATGAAAAGTGGGGTCACGGGAGAGGGAGCG
GTAACAGTTTACGTACCTTATTTAAGGCTATTTGGCTTGCATCACTTCGT
TGCGTATTTGTGTTTCCTCGATAAGGTTGTCATCCTGTGAATTTTTTGCG
CGAAGAACTTGAGAAAGTGTTGCGAGCAGCATACTGCTAGCACGATGTCC
GTTCTTGCAGGGAAGCTATGGAGTTTTGCCCGGAAGTTGGGGTTTGTTTC
GAATCGATTGGGAAGTCCAGCCACCCACCGAGTGCTGCCGCTACGCACGC
GCGCCTTGCCTTGGTACAAACTATATCTACTTTACTTGCCTCGGCAATGC
GTCCGGTCCGACCGGACGATGTCAGGTGGTGGAGACGGCGGACGGCGCCG
AGGGCTATGTAGAGCTGCGCGACAGCCGGGGCTGGGTGCGCTTCCGGCAC
GGCGACGATGACGTCCGCATGGAGCGGCTGCCAGGCTTTCCGCGCGTCGA
CAAGGCGCCAAGGGACTTTGTCGTCGTCGCCGAGGCCGGAGCGCCCGCGA
GGTGAGTGGTCTGGCGCTGATGTGAATGAAGAGCTAGCAGGCTGATTGGA
GACTGCGCAGGTTTGGGGCAGAAGGCTCTTGGAGATATGCTTTGAGTGGA
TAGCCCCGAGGTAGGTTGTCGACAGCCGGCCTTACTTTTTCTTCGCCGTG
GCAAATCGGCTGGCGTTGCACCTCGAGTGAGGAGTAGTGTAATTGCAATA
TCTCACTTCCGTCCTCACTCCGGCCGTAATGGCCAACCCTTCCATAATCC
GGCAGGGTTGGACCGAGCGCGGCGGCGGCAACGACTGGTGAAGTGTTGCA
ATGCGGAGAGCGGGTGACGGCCGCGATGTCGTGGGTGGTGCCGCCCGTCA
GCGGCAAAGGAGAGCCTTCTGCTTTTCTGCTCATTCGCGGCAAGGGCTGG
GTGGTTGCCGGCACCGGCGAGGGACCCGTCCTGGAAGAGATCGTGACTGA
GTCGCCGCTGGCATGACCCGGCGCCGACGCTTAGTCTTTTTTATTGTTTC
CATAATAGGTGCATTGAACATTGCGGGGTGCGGCAGGTTAAAGAGATTTC
CCCGCCTGGTGCCATATATTACGACCACGCACGCAGCGATAGGTAGCCGA
ATCACAATCGAAGAGGAAAACGAAGAGGCACGTTATTCCCTAAATATCAT
GCCGAGTCTTCCTGGAGAGAGGATTTTTAGAGCAGCTCTATGTTTGCCGA
AGTGCTTTGTTCCAACCGTTGCATGGAAGCAAGAAGCAAAAACAGACACG
TAAGGAAGAAAGTAACGGTCTGAGCCGATTGGTGCAAATTCGTAATGGCT
AATGTTACAAACCGGCAACAAGGGCGGCCTCCACGAAAGGGTCGAGGTCG
CCGGCGAGCACGGCCGCCACGTCGCCGGTCTCCTGGCCCGTGCGGTGGTC
CTTCACCATCTGGTACGGCGCCAATACGTACGATCTGCGTGATTTGTCGT
TTTCACCGCCACATGCCCAAAAGCACAGCCGGCAAGGAAAGGGAAAGGGT
ACAGCGGAAAAAGAATGGGAGGAAACTGTGGGCCGTCGCCGCTTCTACTT
CACACGGCCCCCAAAAAGTGGGCAAGTCAGCGCGGCCGCCAGATGCCCCC
ATAGCTAGAGCGTTCTTGGGCAACCTGCATTCAAAAGAAAAAATGACAAC
TCTCCAATCCTTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig729:1610..5872-

>mRNA_P-wetherbeei_contig729.2.1 ID=mRNA_P-wetherbeei_contig729.2.1|Name=mRNA_P-wetherbeei_contig729.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1698bp|location=Sequence derived from alignment at P-wetherbeei_contig729:1610..5872- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGTTGAGACGGAAGATGTGCAGTATTGGCGTGTAGCGTATCATGG
AGGGATTGCAATTCGCGACGATCCAGAGAAACCTGCGGGCCCGGATGCGC
CAAGCTTTGAACGCAACGAGATCCTGCGTTGCCTTCCAGGAGAAAAGAAA
ATCGAAGGTGGCGTATTGGTCCATCTACTTCGAGGCGGCTGGGCCTTCAA
GTCGAAGGGAAATCTCGAAGTTCTCGAACCCGTCAGCCCACCAAAGTCCG
TGACTGGCTTTTGGGCATATCGCGTCACTGCGCCAAACGGGATGCGCTTT
GCGCCAACATCCGACTTTGCGGCGGCGACCGCGGGCGCTGGCACGCCGTC
GCGCCTGACATTGGTGGGAGCCGGCGACGTCGTGACGGCGCGGCGAAAGC
TGTGCCCATCAGGCGGCGGCCCCGTGGCGGTGCAACTGGATGACGGGCTG
GGGTGGCTTTTCGAGTCGCAGCAGGATGGCGAGCTTTTGGACAGCCTTGA
CGGAGCCTGCCCGGTGGAAAAAGTCTCGCCGGCGCTGCGGGAGGAAGGAC
CGTTCTGGTACGGCGTGGTGCACACATCGGGAGCAGTGCTGCTGGAAGGG
CCTGATACGGAGGGTCCAGACCTTCTGGAGATGTTTCTGTTCAGGAAGCT
CTTTGAGGCCTCGGAGCGCTACCGGCCGCCAGGCGAGGAGACCGTCTACC
TCAAGCTGGCGGGGCGGCCCGGCTGGGTGGTGCAGCGCTACGAGGGCACG
GAGATGTGCGCTGAGGAGGAGCCGCCGGCGGACGAGCTGCTCTACAACAG
CTGGTGGCGCGTGGTCTATCCGGGCGGAGTGCGGGTGCGGCTGCGGCCCG
AGCTGCTCGGGGGCATGACTGGCCAGGTCCTACTCTGCGGGCAGTTCTTC
CGCGCGATCCGAAGGGTCAAGGGCCCCGGCGACGACCAAGTCAGCTTTCT
GCTGGTCGACGCCCGCGGCCTCGGCGGCGGCGGTGGCGGCGGCCGATGGG
ACGGCAGCGGCGGCGATGCGTGGGAGGGCGCCGCCAACGCCGCCACCCTC
CTCAACGGCGCCGCCGCCGGCGCTGCCGCCGCGGCCGCGGCCGCTGCAGC
GAGGCTGCCGCCGGATAGCGTAGGTTGGGTGCCAGTGAACCGGCGGGACT
TGGAGGTGGTGGCGCCGGTAGAGGAACCGCGTGTTGCACGTGGGCTATTC
GCCTACCAGGTGGTGGTGGAGGAGAGCCTGCCGGCGCGGGTTGGGCCGCA
CGATCTGGCACCGGAGATGGCGCAGGAGCTGCCGCCGTTCAGCGTCGCCG
CCGTCACGCAGGTGGTGGAGACGGCGGACGGCGCCGAGGGCTATGTAGAG
CTGCGCGACAGCCGGGGCTGGGTGCGCTTCCGGCACGGCGACGATGACGT
CCGCATGGAGCGGCTGCCAGGCTTTCCGCGCGTCGACAAGGCGCCAAGGG
ACTTTGTCGTCGTCGCCGAGGCCGGAGCGCCCGCGAGGGTTGGACCGAGC
GCGGCGGCGGCAACGACTGGTGAAGTGTTGCAATGCGGAGAGCGGGTGAC
GGCCGCGATGTCGTGGGTGGTGCCGCCCGTCAGCGGCAAAGGAGAGCCTT
CTGCTTTTCTGCTCATTCGCGGCAAGGGCTGGGTGGTTGCCGGCACCGGC
GAGGGACCCGTCCTGGAAGAGATCGTGACTGAGTCGCCGCTGGCATGA
back to top