mRNA_P-wetherbeei_contig7271.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A6H5JBL3_9PHAE (DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL3_9PHAE) HSP 1 Score: 219 bits (559), Expect = 2.970e-67 Identity = 119/224 (53.12%), Postives = 156/224 (69.64%), Query Frame = 1
Query: 40 GDIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEIN-SLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVVLNRTTD 708
GD+Y+ LAA VFGK +VS EER +AKVVCLG+ YGMG+ Q A+KL I E QA G++ +F+ +FPG+ FM TRR ARE G T+TGR RHLPEIN S + + +AQAERQAVNSV+QGTAAD++K AM RRL AW+ R G PR+++QIHDEL+ E P E+D+ +L+ LL +CME + LG++ P+ + M VGMSWG MR V++ D
Sbjct: 42 GDVYRKLAAQVFGKEEQSVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRS----RLDEGLDCPRLIMQIHDELVLECPACEEDLEKLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDED 261
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: D7FK42_ECTSI (DNA-directed DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK42_ECTSI) HSP 1 Score: 209 bits (532), Expect = 1.630e-57 Identity = 119/242 (49.17%), Postives = 155/242 (64.05%), Query Frame = 1
Query: 25 AANADGDIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQ-------------ARETGMARTITGRIRHLPEIN-SLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVVLNRTTD 708
A+ GD+Y+ LAA VF K VS EER +AKVVCLG+ YGMG+ Q A+KL I E QA G++ +F+ +FPG+ FM TRR ARE G T+TGR RHLPEIN S + + +AQAERQAVNSV+QGTAAD++K AM RRL AW+ G PR+++QIHDEL+ E P E+D+ RL+ LL +CME + LG++ P+ + M VGMSWG MR V++ D
Sbjct: 977 ASTGGGDVYRKLAAQVFAKEEHGVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRYGTPCRHQISQRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRSSLDE----GLDCPRLIMQIHDELVLECPACEEDLERLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDED 1214
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A6V2EN94_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EN94_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.030e-44 Identity = 96/216 (44.44%), Postives = 137/216 (63.43%), Query Frame = 1
Query: 43 DIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVV 690
DIYK +++ + G VS +ER+ K V L ++YGMG Q A+KL + A +F F GV +ME+T+ AR+ TI GR R+L +INS D + +AQAERQAVN++IQG+AAD+IKLAM T RL+ W +E G A PR+LLQIHDEL+FEV +E D+ +L++++ +C + V E L+VP+ +K + G+SWG M V
Sbjct: 911 DIYKQMSSAITGMPVDEVSDKERKIYKQVTLAILYGMGVPQVAKKLSVTRSTAQNFFTSFYRRFHGVRQWMEQTKDFARQNCFVTTIAGRRRYLDDINSTDTAKKAQAERQAVNTIIQGSAADLIKLAMLKTASRLMDWHKEVIEAGGTNIA-PRLLLQIHDELLFEVMANETDVSKLKDIVTQCCGEECVEEFKLKVPLSLKCTCGISWGLMNEV 1125
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S3V8E1_9STRA (DNA-directed DNA polymerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8E1_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.940e-44 Identity = 89/214 (41.59%), Postives = 138/214 (64.49%), Query Frame = 1
Query: 43 DIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMR 684
D+YK +++ + GK + V+ +ER AK + L ++YGMG A++LG+ + A +F FP V +M++T AR TI+GR R+L I + D++LR+QAERQA+N++IQG+AAD++KLAM R+ W++ER G + PRMLLQIHDEL+FE+ ++ D+ RLR ++ C + V E L+VP+++K S+G SWG M+
Sbjct: 1163 DVYKQMSSVISGKRSNEVTDKERSIAKQLTLAIMYGMGINSVAKQLGVNKESAKSFFRSFYGRFPDVKRWMDQTISSARTNKYVTTISGRRRYLDNITNEDRALRSQAERQAINTIIQGSAADLMKLAMLKMASRITDWRKERTGNGESN-TPPRMLLQIHDELLFEIVANQADVDRLRSVVTRCCTEECVEEFRLKVPLKLKCSIGTSWGSMK 1375
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S2LIW8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LIW8_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.900e-44 Identity = 97/216 (44.91%), Postives = 134/216 (62.04%), Query Frame = 1
Query: 31 NADG-DIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWG 675
N DG DIYK +++ V GK +V+ EER K V L ++YGMG Q ++KLGI +A +F F +++ T+ A++ G TI GR R+L EI S D + RAQAERQAVNSVIQG+AAD++KLAM R+ W +E G G PRMLLQIHDEL+FE+ ++ DI RL++ + C + +L L+VP+++ SVG SWG
Sbjct: 356 NKDGLDIYKQMSSLVTGKTVDSVTIEERAITKQVVLAILYGMGISQVSKKLGINRSKAQHFFNSFFARFKQTRRWIDMTKESAKKLGFVTTIVGRRRYLDEIRSNDSAKRAQAERQAVNSVIQGSAADLMKLAMLKIGSRITDWHKEGHSAGGTG-RHPRMLLQIHDELLFEIANNKDDIQRLKDAIICCCAEECELDLKLKVPLKVNCSVGSSWG 570
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S2WU15_9STRA (DNA-directed DNA polymerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU15_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.880e-43 Identity = 95/215 (44.19%), Postives = 130/215 (60.47%), Query Frame = 1
Query: 40 GDIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRL-LAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQM 681
GDIYK +AA + K VS EER AK CLG+IYGMG + A++ GI + +A +F F GV A+ R + Q G T+T R R + D RA+AERQAVNS IQG+A+D++KLAM A +R+L AW+ + PRM+LQ+HDELIF+VP + + + L+ L+R CM A V ++L L VP+ +KM VG +WG M
Sbjct: 161 GDIYKQVAAKLTQKHVDQVSTEERNLAKSSCLGIIYGMGDKELAKRHGISQAKAESFKQSFFREFQGVGAWRNRIKAQVHTDGFVSTVTRRRREVKTCGPNDWQGRARAERQAVNSTIQGSASDMMKLAMVAIHRQLPAAWKDLKL-------PPPRMILQVHDELIFDVPATLEAVQTLKSLVRSCMVAHVSQQLQLNVPLDVKMCVGTTWGTM 368
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7R9VQU8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQU8_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.500e-43 Identity = 94/217 (43.32%), Postives = 132/217 (60.83%), Query Frame = 1
Query: 43 DIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAG----GAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQM 681
DIYK +A+ K VS EER K V L ++YGMG Q A+KL + A + F F GVS ++E T+ AR TI+GR R+L +I S D+ RAQAERQAVN++IQG+AAD++KLAM + R++ W++ A G G+ PR+LLQIHDEL+FE +E D+ RLR+ + C + VRE L+V + + + +G+SWG M
Sbjct: 273 DIYKQMASACCNKPVEKVSDEERRIYKQVTLAVLYGMGVPQVAKKLSVSRSTAQNFLNTFFRRFQGVSRWIEATKDFARRHQFVTTISGRRRYLDDICSGDKGKRAQAERQAVNTIIQGSAADIMKLAMLKMSARIMDWKK------AEGLDSLGSAPRILLQIHDELLFETDANESDVKRLRDAIMRCCADECVREFDLKVQLTMTLRIGISWGSM 483
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S4JPM5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPM5_9STRA) HSP 1 Score: 167 bits (422), Expect = 8.100e-43 Identity = 96/215 (44.65%), Postives = 134/215 (62.33%), Query Frame = 1
Query: 43 DIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAV--PRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQM 681
DIYKA+A+ GK +VS EER K V L ++YGMG Q A+KL + A + +F F GV ++E T+ AR TI+GR R+L +I S D RAQAERQAVN++IQG+AAD++KLAM + R++ W++E + GG+V P +LLQIHDEL+FE +E D+ LR+ + C + VRE L+V +++K GMSWG M
Sbjct: 911 DIYKAMASACCGKPVHSVSGEERSIYKQVTLAVLYGMGVTQVAKKLNVNRSTAQKFLNSFFRRFQGVRRWIEATKEFARRHQFVTTISGRRRYLDDICSSDNGKRAQAERQAVNTIIQGSAADIMKLAMLKMSSRIMDWKKECL--DSPGGSVVPPMILLQIHDELLFETNANEIDVKMLRDAIMRCCAEECVREFNLKVQLKLKCMYGMSWGSM 1123
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S2LVN7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVN7_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.390e-41 Identity = 89/223 (39.91%), Postives = 134/223 (60.09%), Query Frame = 1
Query: 22 FAANADGDIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVV 690
F + + DIYK +A+ + K A +++ EER Q K V L L+YGM Q A+KL I + A M F F V ++ME T++ AR G TI GR R+L +I S D R+QAERQA+N+VIQG+AAD++K AM + L +WQ+ A A P+M+LQIHDE++ E+ +E+DI +++ + + D L+VP+ +K S G+S+G M+ +
Sbjct: 40 FRGDVNTDIYKQMASLIRNKPAESITPEERAQFKQVTLALLYGMSPNQVAKKLSISKSAAQQTMNDFFRRFRRVKSWMEETKQLARRNGYVLTIAGRRRYLNDIRSEDNGKRSQAERQAINTVIQGSAADLMKTAMIQLSENLQSWQEGTSTGELAMNARPQMVLQIHDEVLLELSFNERDIKKMQAIAVKSCCRDCEELFNLKVPLLLKCSCGLSFGSMKEI 262
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A5C7RRH9_9GAMM (DNA-directed DNA polymerase (Fragment) n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A5C7RRH9_9GAMM) HSP 1 Score: 147 bits (372), Expect = 3.630e-39 Identity = 97/220 (44.09%), Postives = 127/220 (57.73%), Query Frame = 1
Query: 19 AFAANADGDIYKALAATVFGKAAAAVSKEEREQAKVVCLGLIYGMGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQ 678
AFAA AD I++A AA VFGKA V ER AK + GL+YGM + AR+LGIG +A +A + + +PGV FMERTRR+A E G T+ GR +L IN+ +Q LRA AER A+N+ +QGTAAD+IK AM +R L Q+ +MLLQ+HDEL+FE + L + R AD LRVP+ I VGM+W +
Sbjct: 72 AFAAGAD--IHRATAAEVFGKALDTVDANERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDYIALYFNRYPGVRDFMERTRREAHERGYVETVFGRRLYLDNINARNQGLRAGAERAAINAPMQGTAADIIKRAMIDIDRWLAHHAQQ-----------AKMLLQVHDELVFECEADFVETLIPQVTKRMAAAAD------LRVPLVIDSGVGMNWDE 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7271.1.1 >prot_P-wetherbeei_contig7271.1.1 ID=prot_P-wetherbeei_contig7271.1.1|Name=mRNA_P-wetherbeei_contig7271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTback to top mRNA from alignment at P-wetherbeei_contig7271:246..1882+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7271.1.1 ID=mRNA_P-wetherbeei_contig7271.1.1|Name=mRNA_P-wetherbeei_contig7271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1637bp|location=Sequence derived from alignment at P-wetherbeei_contig7271:246..1882+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7271:246..1882+ >mRNA_P-wetherbeei_contig7271.1.1 ID=mRNA_P-wetherbeei_contig7271.1.1|Name=mRNA_P-wetherbeei_contig7271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig7271:246..1882+ (Phaeothamnion wetherbeei SAG_119_79)back to top |