mRNA_P-wetherbeei_contig7260.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7260.1.1
Unique NamemRNA_P-wetherbeei_contig7260.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A536T0I5_9PROT (Formate dehydrogenase subunit alpha (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536T0I5_9PROT)

HSP 1 Score: 643 bits (1659), Expect = 5.700e-229
Identity = 300/372 (80.65%), Postives = 337/372 (90.59%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPM+FPDYQRVDNP+A+QRFEKLWG  LD KPGLTVVEIMDAAY GK+RGMYIMGENPAMSDPD++HAR AMAKL+HLVVQDIFLTET YLADVVLPATA+PEKDGT TNTDRMVQLGRKA++APGEA+ DLWI+ ELA+ +GLDW YAHP++V+NEMR+ M+SI GITWERLERDS V YPCENEGDPG+PVVF   FPTATGR +FVPAD+I A ERPD+EYP VLITGRQLEHWHTGAMTRR+G LDA+EP+ V S+HPLDL ALGAKPGD++TV+SRRG +S+YARAD GTPRGAVFIPF +YEAAAN+LTNP LDPFGKIPEFKYCAV+VS GG  PGDPGYGKG TL+ +YG
Sbjct:  161 RGQNNVQGASDSGLIPMVFPDYQRVDNPDAHQRFEKLWGTTLDKKPGLTVVEIMDAAYDGKIRGMYIMGENPAMSDPDLEHARGAMAKLEHLVVQDIFLTETAYLADVVLPATAWPEKDGTVTNTDRMVQLGRKALNAPGEAREDLWIIVELAKRLGLDWTYAHPREVWNEMRQAMDSIRGITWERLERDSSVTYPCENEGDPGEPVVFQTHFPTATGRGRFVPADIIPAAERPDEEYPMVLITGRQLEHWHTGAMTRRSGALDAIEPEAVASLHPLDLDALGAKPGDLVTVESRRGKVSIYARADAGTPRGAVFIPFCYYEAAANLLTNPVLDPFGKIPEFKYCAVRVSAGGERPGDPGYGKGRTLQELYG 532          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A1F4F5N4_9PROT (Formate dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F5N4_9PROT)

HSP 1 Score: 638 bits (1645), Expect = 4.830e-221
Identity = 302/372 (81.18%), Postives = 332/372 (89.25%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPMM+PDYQRV  PEA  RFEK WG KLD KPGLTVVEIM+AAY GK+RGMYIMGENPAMSDPD++HARAAMAKL+HLVVQDIFLTET YLADVVLPATA+PEKDGT TNTDRMVQLGRKA+ APGEA+ DLWI+ ELA+ +GL W YAHP++VF+EMR  M+SI GITWERLERDS V YPCENEGDPGQPVVF   FPT TGRAKFVPADLI ADERPD EYP VLITGRQLEHWHTGA+TRR+GVLDA+EP+P   +HPLDLA L AKPGD+I+V+SRRG +SLYARADEG PRGAVFIPF +YEAAAN+LTNP LDPFGKIPEFKYCAVKVS+GGA PGDPGYGKG TL+ +YG
Sbjct:  563 RGQNNVQGASDSGLIPMMYPDYQRVATPEAKARFEKFWGTKLDPKPGLTVVEIMNAAYEGKIRGMYIMGENPAMSDPDLEHARAAMAKLEHLVVQDIFLTETAYLADVVLPATAWPEKDGTVTNTDRMVQLGRKALKAPGEAREDLWIIVELAKRLGLSWTYAHPREVFDEMRGCMDSIRGITWERLERDSSVTYPCENEGDPGQPVVFVTHFPTPTGRAKFVPADLIRADERPDKEYPMVLITGRQLEHWHTGAITRRSGVLDAIEPEPTALLHPLDLAELKAKPGDLISVESRRGKVSLYARADEGAPRGAVFIPFCYYEAAANLLTNPVLDPFGKIPEFKYCAVKVSKGGARPGDPGYGKGRTLEELYG 934          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A537A6K1_9PROT (Formate dehydrogenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A6K1_9PROT)

HSP 1 Score: 633 bits (1633), Expect = 3.130e-219
Identity = 298/372 (80.11%), Postives = 332/372 (89.25%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPMM+PDYQRVDNPEA++RFEKLWG  LD KPGLTVVEIM+AAY GK+RGMYIMGENPAMSDPD+DHARA MAKL+HLVVQDIFLTET YLADVVLPATA+PEKDGT TNTDRMVQLGR+A+ APGEA+ DLWI+ ELA+ +GLDW YAHPK+V++EMR+GM+SI GITWERLERDS V YPCENEGDPGQPVVF   FPTATGR KFVPADLI A ERPD EYP VLITGRQLEHWHTGAMTRR+G LDA+EP+ V S+HPLDL ALGA+PG ++TV+SRRG I +YARAD G PRG+VFIPF +YEAAAN+LTNP LDPFGKIPEFKYCAV+V  GG  PGDPGYGKG TL+ +YG
Sbjct:  563 RGQNNVQGASDSGLIPMMYPDYQRVDNPEASKRFEKLWGGNLDKKPGLTVVEIMNAAYDGKIRGMYIMGENPAMSDPDLDHARAGMAKLEHLVVQDIFLTETAYLADVVLPATAWPEKDGTVTNTDRMVQLGRRALKAPGEAREDLWIIVELAKRLGLDWRYAHPKEVWDEMRQGMDSIRGITWERLERDSSVTYPCENEGDPGQPVVFQTHFPTATGRGKFVPADLIPAAERPDKEYPMVLITGRQLEHWHTGAMTRRSGALDAIEPEAVASLHPLDLDALGAQPGGIVTVESRRGKIYIYARADAGIPRGSVFIPFCYYEAAANLLTNPVLDPFGKIPEFKYCAVRVKPGGERPGDPGYGKGRTLEELYG 934          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A521YX66_9PROT (Formate dehydrogenase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YX66_9PROT)

HSP 1 Score: 625 bits (1612), Expect = 4.640e-216
Identity = 297/372 (79.84%), Postives = 331/372 (88.98%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPMM+PDYQRVDNPEA +RFE  WG  LD KPGLTVVEIM+AA  GK+RGMYIMGENPAMSDPDV+HARAAMAKL+HLVVQDIFLTET YLADVVLPATA+PEKDG+ TNTDRMVQLGR+A+ APG+AK DLWI+ ELA+ +GL W+Y  PKDV++EMR+ M+SI GITWERLERDS V YPCENEGDPGQPVVF   FPTATGRA+FVPADLI A ERPD  YP VLITGRQLEHWHTGAMTRR+G LDA+EP+P+ S+HPLDLA    KPG+VITVQSRRG+ISLYARADEGTPRGAVFIPF ++EAAAN+LTNP LDPFGKIPEFKYCAV+V+RGG  PGDPGYGKG TL+ +YG
Sbjct:  563 RGQNNVQGASDSGLIPMMYPDYQRVDNPEAAKRFEGFWGRTLDRKPGLTVVEIMNAASEGKIRGMYIMGENPAMSDPDVEHARAAMAKLEHLVVQDIFLTETAYLADVVLPATAWPEKDGSVTNTDRMVQLGRRALSAPGQAKEDLWIIVELAKRLGLPWSYEKPKDVWDEMRQCMDSIKGITWERLERDSSVTYPCENEGDPGQPVVFQTHFPTATGRARFVPADLIPAAERPDASYPMVLITGRQLEHWHTGAMTRRSGALDAIEPEPMASLHPLDLAEKNVKPGEVITVQSRRGTISLYARADEGTPRGAVFIPFCYFEAAANLLTNPVLDPFGKIPEFKYCAVRVTRGGERPGDPGYGKGRTLEELYG 934          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A536WY47_9PROT (Formate dehydrogenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WY47_9PROT)

HSP 1 Score: 624 bits (1608), Expect = 1.860e-215
Identity = 297/372 (79.84%), Postives = 327/372 (87.90%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPM+FPDYQRVDN EA  RFEKLWG KLD KPGLTVVEIM+AAY G +RGMYIMGENPAMSDPD++HARAAMAKL HLVVQDIFLTET YLADVVLPATA+PEKDGT TNTDRMVQLGR+A+ APGEA+ DLWI+ ELA+ +GL W YAHP++V+NEMR+GM+SI GITWERLERDS V YPCENEGDPG+PVVF   FPTATGR KFVPAD+I A ERPD EYP VLITGRQLEHWHTGAMTRR+G LDA+EP+ V S+HPLDL ALGA+ G +ITV+SRRG ISLYARAD GTPRGAVFIPF FYEAAAN+LTNP LDP+GKIPEFKYCAV+V  GG  PGDP YGKG TL  +YG
Sbjct:  563 RGQNNVQGASDSGLIPMVFPDYQRVDNDEAGSRFEKLWGTKLDRKPGLTVVEIMNAAYDGSIRGMYIMGENPAMSDPDLEHARAAMAKLGHLVVQDIFLTETAYLADVVLPATAWPEKDGTVTNTDRMVQLGRRALKAPGEAREDLWIIVELAKRLGLPWTYAHPREVWNEMRQGMDSIRGITWERLERDSSVTYPCENEGDPGEPVVFQTHFPTATGRGKFVPADIIPAAERPDKEYPMVLITGRQLEHWHTGAMTRRSGALDAIEPEAVASLHPLDLDALGARAGALITVESRRGRISLYARADAGTPRGAVFIPFCFYEAAANLLTNPVLDPYGKIPEFKYCAVRVKPGGERPGDPHYGKGRTLDELYG 934          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A1F4CZ19_9PROT (Formate dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CZ19_9PROT)

HSP 1 Score: 622 bits (1603), Expect = 1.060e-214
Identity = 295/372 (79.30%), Postives = 327/372 (87.90%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPMM+PDYQRV+  EAN+RFEK WG  LD KPGLTVVEIM+AA  GK+RGMYIMGENPAMSDPD+ HARAAMAKL+HLVVQDIFLTET YLADVVLPATA+PEKDGT TNTDRMVQLGR+A+ APGEA+ DLWI+ ELA+ +GL W Y+HPKDVF+EMR  M+SI GITWERLERDS V YPCENEGDPGQPVVF   FPTATGR KFVPADLI A ERPD  YP VLITGRQLEHWHTGA+TRR+GVLDA+EP+P+ S+HPLD+  +G KPG  +TV+SRRG ISLYARAD GTPRGAVFIPF +YEAAAN+LTNP LDPFGKIPEFKYCAV+VSRGGA PGDPGYGKG TL  ++G
Sbjct:  563 RGQNNVQGASDSGLIPMMYPDYQRVNTDEANRRFEKFWGTALDKKPGLTVVEIMNAAAQGKIRGMYIMGENPAMSDPDLAHARAAMAKLEHLVVQDIFLTETAYLADVVLPATAWPEKDGTVTNTDRMVQLGRRALKAPGEAREDLWIIVELAKRLGLPWAYSHPKDVFDEMRGCMDSIKGITWERLERDSSVTYPCENEGDPGQPVVFQTHFPTATGRGKFVPADLIPAAERPDARYPMVLITGRQLEHWHTGAITRRSGVLDAIEPEPMASLHPLDMEEIGLKPGGTVTVESRRGKISLYARADAGTPRGAVFIPFCYYEAAANLLTNPALDPFGKIPEFKYCAVRVSRGGARPGDPGYGKGRTLAELHG 934          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A1F4AIZ2_9PROT (Formate dehydrogenase subunit alpha (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AIZ2_9PROT)

HSP 1 Score: 609 bits (1570), Expect = 3.730e-214
Identity = 287/370 (77.57%), Postives = 323/370 (87.30%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTM 1110
            RGQNNVQGASDSGLIPM+FPDYQRVD+ +A  RFEKLWG+ LD +PGLTVVEIM A   GK+RGMY+MGENPAMSDPD  HARAA+AKLDHLVVQ+IFLTETCY ADV+LPATA+PEKDGT TNTDRMVQLGR+A+DAPG AKPDLWI+ E+AR +GL+WNY+ P DVFNEMR+ M SIAGITWERLER+SCV YPCE EGDPGQPVVFT+ FPT TGRAKFVPAD+I A ERPD E+P VLITGRQLEHWHTGA+TRRA VLDA+EPDP+ S+HPLDL A+GAKPG+VI+V SRRG ISLYARAD+GTPRGAVFIPF +YEAAAN+LTNP LDPFGKIPEFKYCAVKV++GG       YG G  L  +
Sbjct:  245 RGQNNVQGASDSGLIPMVFPDYQRVDHADARARFEKLWGVSLDPQPGLTVVEIMHAVLDGKIRGMYVMGENPAMSDPDAHHARAALAKLDHLVVQEIFLTETCYYADVILPATAWPEKDGTVTNTDRMVQLGRRALDAPGSAKPDLWIIQEIARRLGLEWNYSGPADVFNEMRRAMPSIAGITWERLERESCVTYPCEREGDPGQPVVFTERFPTPTGRAKFVPADIIPAAERPDREFPFVLITGRQLEHWHTGAITRRATVLDAIEPDPIASLHPLDLDAIGAKPGEVISVASRRGIISLYARADDGTPRGAVFIPFCYYEAAANLLTNPALDPFGKIPEFKYCAVKVTKGGELTPRSSYGGGQALAAL 614          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A0S8AY55_9PROT (Formate dehydrogenase (Fragment) n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AY55_9PROT)

HSP 1 Score: 612 bits (1577), Expect = 8.570e-213
Identity = 293/372 (78.76%), Postives = 323/372 (86.83%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPMM+PDYQRV  PEA  RFEK WG  LD KPGLTVVEIM+AAY G +RGMYIMGENPAMSDPD+ HARAAMAKL+HLVVQDIFLTET YLADVVLPATA+PEKDGT TNTDRMVQLGRKA+DAPGEA+PDLWI+ ELAR +GLDW YA P++V+ EMR  M+SI GI+W RLERD+ V YPC NEGDPGQPVVF   FPTATGR  FVPADLI A ERPD  YP VLITGRQLEHWHTGAMTRR+GVLDA+EP+P+ SIHPLDLAAL A PGDV+TV+SRRG I+LYARAD GTPRGAVF+PFA+ EAAAN+LTNP LDPFGKIPEFKYCAV+V++GGA P DPGYGKG  L  + G
Sbjct:  414 RGQNNVQGASDSGLIPMMYPDYQRVATPEARARFEKYWGAALDAKPGLTVVEIMNAAYEGAIRGMYIMGENPAMSDPDLAHARAAMAKLEHLVVQDIFLTETAYLADVVLPATAWPEKDGTVTNTDRMVQLGRKALDAPGEARPDLWIIQELARRLGLDWRYAGPREVWEEMRGCMDSIRGISWARLERDASVTYPCANEGDPGQPVVFQTHFPTATGRGSFVPADLIRAAERPDAAYPMVLITGRQLEHWHTGAMTRRSGVLDAIEPEPMVSIHPLDLAALKANPGDVVTVESRRGRIALYARADAGTPRGAVFVPFAYQEAAANLLTNPVLDPFGKIPEFKYCAVRVTKGGARPADPGYGKGRALAAIAG 785          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A521W2B3_9PROT (Formate dehydrogenase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521W2B3_9PROT)

HSP 1 Score: 608 bits (1568), Expect = 1.500e-209
Identity = 290/373 (77.75%), Postives = 328/373 (87.94%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPA-DLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPM+FPDYQRVDNPEAN+RFE LWG KLD KPGLTVVEI++AAY  ++RGMYIMGENPAMSDP+  HARA +A+L+HLVVQDIFLTET  LADVVLPATA+PEK GT TNTDRMVQLGR A+  PGEA+ DLWI+ ELAR +GL W YAHP++VF+EMRKGMNSIAGITWERLERDS V YPCE EGDPG+ VVFT  FPT TGRA+ VPA DLI A ERPD +YP VLITGRQLEHWHTGAMTRR+GVLDA+EP+PV S+HPLDLAAL A+PG+V+TV+SRRG I+LYARAD+GTPRGA+FIPFA+ EAAAN+LTNP LDPFGKIPEFKYCAV+V +GGA P DPGYGKG  L+ + G
Sbjct:  552 RGQNNVQGASDSGLIPMVFPDYQRVDNPEANRRFEALWGGKLDRKPGLTVVEIVNAAYERRIRGMYIMGENPAMSDPEAAHARAGLARLEHLVVQDIFLTETAALADVVLPATAWPEKTGTVTNTDRMVQLGRPALAPPGEAREDLWIISELARRLGLAWTYAHPREVFDEMRKGMNSIAGITWERLERDSVVTYPCEKEGDPGEAVVFTQGFPTPTGRARMVPAADLIPAAERPDADYPMVLITGRQLEHWHTGAMTRRSGVLDAIEPEPVASMHPLDLAALKARPGEVVTVESRRGRIALYARADDGTPRGAIFIPFAYQEAAANLLTNPALDPFGKIPEFKYCAVRVKKGGAKPADPGYGKGRALEEVQG 924          
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Match: A0A177QUI0_9PROT (Formate dehydrogenase n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177QUI0_9PROT)

HSP 1 Score: 605 bits (1561), Expect = 2.300e-208
Identity = 287/372 (77.15%), Postives = 320/372 (86.02%), Query Frame = 1
Query:    1 RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTVVEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLTETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILCELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENEGDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEHWHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSISLYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVSRGGAAPGDPGYGKGTTLKTMYG 1116
            RGQNNVQGASDSGLIPMM+PDYQRV+  EANQRFEK W   LD KPGLTVVEI++AAY GK+RGMYIMGENPAMSDPDVDHARA MAKL+H+VVQDIFLTET YLADVVLPATA+PEK GT TNTDRMVQLGRKA++ PG+A+ D WIL EL + +GLDW Y HP++VFNEMR  M+SI GITWERLERDS V YPCENEGD G PVVFT+VFPT TGRAKFVPAD+I A ERPD EY  VLITGRQLEHWHTGAMTRR+GVLDALEP+P  S++P D+   G K G++ TV+SRRG ISL+ R D GTPRGAVFIPFAFYEAAANMLTNP LDPFGKIPEFKYCAVKV++GG  PG+PGYGKG +L  +YG
Sbjct:  563 RGQNNVQGASDSGLIPMMYPDYQRVNTDEANQRFEKFWATPLDKKPGLTVVEIVNAAYDGKIRGMYIMGENPAMSDPDVDHARAGMAKLEHMVVQDIFLTETAYLADVVLPATAWPEKTGTVTNTDRMVQLGRKAVEPPGQAREDFWILVELGKRLGLDWKYQHPREVFNEMRGCMDSIKGITWERLERDSSVTYPCENEGDAGTPVVFTEVFPTPTGRAKFVPADIIPAAERPDSEYAMVLITGRQLEHWHTGAMTRRSGVLDALEPEPTVSMNPQDMRERGIKAGEIATVESRRGKISLFVREDGGTPRGAVFIPFAFYEAAANMLTNPALDPFGKIPEFKYCAVKVTKGGEQPGNPGYGKGRSLGEIYG 934          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7260.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536T0I5_9PROT5.700e-22980.65Formate dehydrogenase subunit alpha (Fragment) n=1... [more]
A0A1F4F5N4_9PROT4.830e-22181.18Formate dehydrogenase n=1 Tax=Betaproteobacteria b... [more]
A0A537A6K1_9PROT3.130e-21980.11Formate dehydrogenase n=1 Tax=Betaproteobacteria b... [more]
A0A521YX66_9PROT4.640e-21679.84Formate dehydrogenase n=2 Tax=unclassified Betapro... [more]
A0A536WY47_9PROT1.860e-21579.84Formate dehydrogenase n=1 Tax=Betaproteobacteria b... [more]
A0A1F4CZ19_9PROT1.060e-21479.30Formate dehydrogenase n=1 Tax=Betaproteobacteria b... [more]
A0A1F4AIZ2_9PROT3.730e-21477.57Formate dehydrogenase subunit alpha (Fragment) n=1... [more]
A0A0S8AY55_9PROT8.570e-21378.76Formate dehydrogenase (Fragment) n=1 Tax=Betaprote... [more]
A0A521W2B3_9PROT1.500e-20977.75Formate dehydrogenase n=3 Tax=unclassified Betapro... [more]
A0A177QUI0_9PROT2.300e-20877.15Formate dehydrogenase n=1 Tax=Betaproteobacteria b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7260contigP-wetherbeei_contig7260:3..1121 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1095769.CAHF01000011_gene2631
Preferred namefdhA1
PFAMsFer2_4,Fer4,Fer4_9,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3
Model size1119
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC02796
KEGG koko:K00123,ko:K22015
KEGG ReactionR00519
KEGG Pathwayko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.39e-198
EggNOG OGsCOG3383@1|root,COG3383@2|Bacteria,1QTZB@1224|Proteobacteria,2VP2Q@28216|Betaproteobacteria,472B9@75682|Oxalobacteraceae
EC1.17.1.9,1.17.99.7
DescriptionMolybdopterin oxidoreductase Fe4S4 domain
Cds size1119
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186968.8484592-CDS-P-wetherbeei_contig7260:2..11211683186968.8484592-CDS-P-wetherbeei_contig7260:2..1121Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7260 3..1121 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7260.1.1prot_P-wetherbeei_contig7260.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7260 3..1121 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7260.1.1

>prot_P-wetherbeei_contig7260.1.1 ID=prot_P-wetherbeei_contig7260.1.1|Name=mRNA_P-wetherbeei_contig7260.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=373bp
RGQNNVQGASDSGLIPMMFPDYQRVDNPEANQRFEKLWGMKLDTKPGLTV
VEIMDAAYAGKVRGMYIMGENPAMSDPDVDHARAAMAKLDHLVVQDIFLT
ETCYLADVVLPATAFPEKDGTFTNTDRMVQLGRKAIDAPGEAKPDLWILC
ELARGIGLDWNYAHPKDVFNEMRKGMNSIAGITWERLERDSCVIYPCENE
GDPGQPVVFTDVFPTATGRAKFVPADLISADERPDDEYPTVLITGRQLEH
WHTGAMTRRAGVLDALEPDPVCSIHPLDLAALGAKPGDVITVQSRRGSIS
LYARADEGTPRGAVFIPFAFYEAAANMLTNPKLDPFGKIPEFKYCAVKVS
RGGAAPGDPGYGKGTTLKTMYG*
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mRNA from alignment at P-wetherbeei_contig7260:3..1121+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7260.1.1 ID=mRNA_P-wetherbeei_contig7260.1.1|Name=mRNA_P-wetherbeei_contig7260.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1119bp|location=Sequence derived from alignment at P-wetherbeei_contig7260:3..1121+ (Phaeothamnion wetherbeei SAG_119_79)
CGCGGCCAGAACAACGTGCAGGGCGCCTCCGACTCGGGGTTGATCCCGAT GATGTTCCCCGACTACCAGCGGGTGGACAATCCCGAAGCCAACCAGCGGT TCGAAAAGCTCTGGGGCATGAAACTCGACACCAAGCCGGGTCTGACCGTG GTGGAGATCATGGATGCAGCCTACGCCGGCAAGGTCCGCGGCATGTACAT CATGGGCGAGAACCCCGCGATGTCCGATCCGGACGTGGACCACGCCCGCG CCGCCATGGCCAAGCTTGACCACCTGGTGGTGCAGGATATCTTCCTGACG GAAACCTGCTATCTCGCTGACGTGGTGCTGCCGGCCACGGCCTTCCCGGA GAAGGACGGCACGTTCACCAACACCGACCGCATGGTGCAACTCGGCCGCA AGGCAATCGATGCGCCCGGCGAGGCGAAGCCGGACCTGTGGATCCTCTGC GAGCTGGCCAGGGGGATCGGCCTCGACTGGAACTATGCCCACCCGAAGGA TGTGTTCAACGAGATGCGCAAGGGGATGAACTCCATCGCCGGCATCACCT GGGAGCGCCTGGAGCGGGATTCCTGCGTCATCTACCCCTGCGAAAACGAG GGCGATCCGGGCCAGCCGGTGGTATTCACCGACGTCTTCCCCACGGCCAC CGGGCGCGCGAAGTTCGTTCCCGCCGACCTGATTTCCGCGGACGAAAGGC CGGACGACGAGTACCCGACCGTGCTCATTACCGGCCGGCAGCTCGAGCAC TGGCACACCGGCGCGATGACCCGACGCGCCGGGGTGCTGGACGCCCTCGA GCCGGACCCGGTCTGCTCGATCCACCCGCTCGACCTCGCGGCGCTCGGCG CAAAACCGGGCGACGTCATCACGGTGCAATCGCGTCGCGGCAGCATCTCC CTGTATGCCCGGGCCGACGAAGGCACGCCGCGAGGTGCGGTCTTCATCCC GTTCGCCTTCTACGAGGCGGCGGCGAACATGCTGACCAACCCCAAGCTCG ACCCGTTCGGCAAGATCCCCGAGTTCAAGTACTGCGCGGTGAAGGTCTCG CGTGGCGGGGCCGCGCCGGGGGATCCGGGCTACGGCAAGGGGACGACGTT GAAGACGATGTACGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7260:3..1121+

>mRNA_P-wetherbeei_contig7260.1.1 ID=mRNA_P-wetherbeei_contig7260.1.1|Name=mRNA_P-wetherbeei_contig7260.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1119bp|location=Sequence derived from alignment at P-wetherbeei_contig7260:3..1121+ (Phaeothamnion wetherbeei SAG_119_79)
CGCGGCCAGAACAACGTGCAGGGCGCCTCCGACTCGGGGTTGATCCCGAT
GATGTTCCCCGACTACCAGCGGGTGGACAATCCCGAAGCCAACCAGCGGT
TCGAAAAGCTCTGGGGCATGAAACTCGACACCAAGCCGGGTCTGACCGTG
GTGGAGATCATGGATGCAGCCTACGCCGGCAAGGTCCGCGGCATGTACAT
CATGGGCGAGAACCCCGCGATGTCCGATCCGGACGTGGACCACGCCCGCG
CCGCCATGGCCAAGCTTGACCACCTGGTGGTGCAGGATATCTTCCTGACG
GAAACCTGCTATCTCGCTGACGTGGTGCTGCCGGCCACGGCCTTCCCGGA
GAAGGACGGCACGTTCACCAACACCGACCGCATGGTGCAACTCGGCCGCA
AGGCAATCGATGCGCCCGGCGAGGCGAAGCCGGACCTGTGGATCCTCTGC
GAGCTGGCCAGGGGGATCGGCCTCGACTGGAACTATGCCCACCCGAAGGA
TGTGTTCAACGAGATGCGCAAGGGGATGAACTCCATCGCCGGCATCACCT
GGGAGCGCCTGGAGCGGGATTCCTGCGTCATCTACCCCTGCGAAAACGAG
GGCGATCCGGGCCAGCCGGTGGTATTCACCGACGTCTTCCCCACGGCCAC
CGGGCGCGCGAAGTTCGTTCCCGCCGACCTGATTTCCGCGGACGAAAGGC
CGGACGACGAGTACCCGACCGTGCTCATTACCGGCCGGCAGCTCGAGCAC
TGGCACACCGGCGCGATGACCCGACGCGCCGGGGTGCTGGACGCCCTCGA
GCCGGACCCGGTCTGCTCGATCCACCCGCTCGACCTCGCGGCGCTCGGCG
CAAAACCGGGCGACGTCATCACGGTGCAATCGCGTCGCGGCAGCATCTCC
CTGTATGCCCGGGCCGACGAAGGCACGCCGCGAGGTGCGGTCTTCATCCC
GTTCGCCTTCTACGAGGCGGCGGCGAACATGCTGACCAACCCCAAGCTCG
ACCCGTTCGGCAAGATCCCCGAGTTCAAGTACTGCGCGGTGAAGGTCTCG
CGTGGCGGGGCCGCGCCGGGGGATCCGGGCTACGGCAAGGGGACGACGTT
GAAGACGATGTACGGCTGA
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