mRNA_P-wetherbeei_contig7255.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Match: A0A1F4CP96_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CP96_9PROT) HSP 1 Score: 173 bits (438), Expect = 2.030e-53 Identity = 86/130 (66.15%), Postives = 105/130 (80.77%), Query Frame = 1
Query: 1 MRIGLLVVAGAALLGFLAIAVVLPQMEGGESRDAAAVLVSGTNAAKTEVTAAAEKAGNLAGAGASVKLAPKTDPKYGELKWIVEPGGVIRGWNEKNAIEIAMTPTLAGGKVAWSCKGYPQQAMPVTCGGK 390
MRIGLLVVA AL+GFL +AVVLPQM+G E ++AA LV+G AK +V AAAEK+G LAGAG VK+APK+DPK G++KWIV G IRGWNEKNA+E+A+TP+L GGKV+WSCKGYP AMP +C G+
Sbjct: 1 MRIGLLVVAVLALIGFLVVAVVLPQMQGAELKEAAEALVAGAEPAKQQVAAAAEKSGGLAGAGNGVKIAPKSDPKQGQMKWIVGADGAIRGWNEKNALEVALTPSLQGGKVSWSCKGYPVNAMPQSCSGR 130
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Match: A0A1F3YQX7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YQX7_9PROT) HSP 1 Score: 169 bits (428), Expect = 6.990e-52 Identity = 81/130 (62.31%), Postives = 104/130 (80.00%), Query Frame = 1
Query: 1 MRIGLLVVAGAALLGFLAIAVVLPQMEGGESRDAAAVLVSGTNAAKTEVTAAAEKAGNLAGAGASVKLAPKTDPKYGELKWIVEPGGVIRGWNEKNAIEIAMTPTLAGGKVAWSCKGYPQQAMPVTCGGK 390
MR LLV+AG AL+GF+A++ +LPQM G E+++AA L++G +A K +V AAAEKAGNLAGAG ++K+A ++DPK+GELKWIVE G IRGWNEKNAIEI++TP L GKVAW C+GYP MP CGG+
Sbjct: 1 MRAALLVIAGLALVGFIAVSFILPQMAGTEAKEAAQALIAGADAPKQQVAAAAEKAGNLAGAGNNIKVASRSDPKFGELKWIVEANGAIRGWNEKNAIEISVTPNLKDGKVAWICRGYPNATMPAACGGR 130
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Match: UPI0019B32EEC (Uncharacterized protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B32EEC) HSP 1 Score: 169 bits (427), Expect = 9.930e-52 Identity = 80/130 (61.54%), Postives = 105/130 (80.77%), Query Frame = 1
Query: 1 MRIGLLVVAGAALLGFLAIAVVLPQMEGGESRDAAAVLVSGTNAAKTEVTAAAEKAGNLAGAGASVKLAPKTDPKYGELKWIVEPGGVIRGWNEKNAIEIAMTPTLAGGKVAWSCKGYPQQAMPVTCGGK 390
MR LLV+AG AL+GF+A++ VLPQM G ++++AA LV+G A K ++ A AEK+G++ GAGA+VK+A T PK+GELKWIVEP G IRGWNEKNAIEI++TP L GKVAW+C+GYP +MP+TCGG+
Sbjct: 1 MRAALLVIAGLALIGFIAVSFVLPQMAGADAKEAAQALVAGAEAPKQQIAATAEKSGSVTGAGANVKVAASTHPKFGELKWIVEPNGAIRGWNEKNAIEISVTPGLKDGKVAWTCRGYPNASMPMTCGGR 130
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Match: A0A536Y7Q0_9PROT (Uncharacterized protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y7Q0_9PROT) HSP 1 Score: 160 bits (404), Expect = 3.050e-48 Identity = 79/130 (60.77%), Postives = 99/130 (76.15%), Query Frame = 1
Query: 1 MRIGLLVVAGAALLGFLAIAVVLPQMEGGESRDAAAVLVSGTNAAKTEVTAAAEKAGNLAGAGASVKLAPKTDPKYGELKWIVEPGGVIRGWNEKNAIEIAMTPTLAGGKVAWSCKGYPQQAMPVTCGGK 390
MRIGLLVVA AL+GFL +AVVLPQM ++++AA L++G A+ +V AAEK G LAGAG VKLAP+ DPK+GE+KWIV G IRGWNEKNA+E+A+TP + G V+W+CKGYP AMP CGG+
Sbjct: 1 MRIGLLVVAALALIGFLVVAVVLPQMARAQAKEAAQALLAGAQPAQQQVGMAAEKGGGLAGAGRGVKLAPRIDPKHGEMKWIVAEDGAIRGWNEKNALEVALTPGVQSGTVSWNCKGYPVSAMPSACGGR 130
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Match: A0A537CVX8_9PROT (Uncharacterized protein n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CVX8_9PROT) HSP 1 Score: 155 bits (391), Expect = 2.720e-46 Identity = 74/130 (56.92%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 1 MRIGLLVVAGAALLGFLAIAVVLPQMEGGESRDAAAVLVSGTNAAKTEVTAAAEKAGNLAGAGASVKLAPKTDPKYGELKWIVEPGGVIRGWNEKNAIEIAMTPTLAGGKVAWSCKGYPQQAMPVTCGGK 390
MRIGLL+VAG AL+GFL +AVVLP M+G E+++AA L+ G AK V AAEK G+++G G +K+ + DPKYG++KWIV GVI GWNEKNAIE+ + P++ GGK +W+CKGYP AMP CGG+
Sbjct: 1 MRIGLLIVAGLALIGFLVVAVVLPHMQGTEAKEAAQALIEGAEPAKQRVGVAAEKTGHVSGTG--IKVTARNDPKYGDMKWIVSDNGVIHGWNEKNAIEVTLMPSVQGGKASWNCKGYPVNAMPPNCGGR 128
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Match: A0A0S8B483_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B483_9PROT) HSP 1 Score: 145 bits (367), Expect = 1.290e-42 Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 1 MRIGLLVVAGAALLGFLAIAVVLPQMEGGESRDAAAVLVSGTNAAKTEVTAAAEKAGNLAGAGASVKLAPKTDPKYGELKWIVEPGGVIRGWNEKNAIEIAMTPTLAGGKVAWSCKGYPQQAMPVTCGGK 390
MR L+VVA AL+GFLA+AVVLP M E+++AA L++GT AK +V A A ++ L G+G +KLAP+ + K+GELKW+V P G IRGWNE NAIE+ +TP L GKV+W C+GYP +AMP +CGG+
Sbjct: 1 MRAVLIVVAVLALVGFLAVAVVLPMMADAEAKEAAQALLAGTEPAKQKVAAVAAQSKTLDGSGKGIKLAPQQNSKFGELKWLVAPSGEIRGWNEPNAIEVVLTPILQSGKVSWRCQGYPNRAMPASCGGR 130
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Match: A0A1F4FGT0_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4FGT0_9PROT) HSP 1 Score: 134 bits (336), Expect = 3.230e-38 Identity = 58/105 (55.24%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 76 MEGGESRDAAAVLVSGTNAAKTEVTAAAEKAGNLAGAGASVKLAPKTDPKYGELKWIVEPGGVIRGWNEKNAIEIAMTPTLAGGKVAWSCKGYPQQAMPVTCGGK 390
M G ++R+AA L++G AK +V+A+AEK+GNL+G G +K+A + DPK+GE+KWIV G IRGWNEKNA+E+ +TP+L GK W+CKGYP AMP +CGG+
Sbjct: 1 MAGADAREAAQALIAGAEPAKQQVSASAEKSGNLSGVGKGIKVASRNDPKHGEMKWIVSDNGDIRGWNEKNALEVTITPSLQSGKANWNCKGYPVDAMPTSCGGR 105 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7255.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7255.2.1 >prot_P-wetherbeei_contig7255.2.1 ID=prot_P-wetherbeei_contig7255.2.1|Name=mRNA_P-wetherbeei_contig7255.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp MRIGLLVVAGAALLGFLAIAVVLPQMEGGESRDAAAVLVSGTNAAKTEVTback to top mRNA from alignment at P-wetherbeei_contig7255:1338..1730- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7255.2.1 ID=mRNA_P-wetherbeei_contig7255.2.1|Name=mRNA_P-wetherbeei_contig7255.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig7255:1338..1730- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7255:1338..1730- >mRNA_P-wetherbeei_contig7255.2.1 ID=mRNA_P-wetherbeei_contig7255.2.1|Name=mRNA_P-wetherbeei_contig7255.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig7255:1338..1730- (Phaeothamnion wetherbeei SAG_119_79)back to top |