mRNA_P-wetherbeei_contig723.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A7S3YF48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF48_HETAK) HSP 1 Score: 182 bits (462), Expect = 5.330e-47 Identity = 138/444 (31.08%), Postives = 192/444 (43.24%), Query Frame = 1
Query: 658 LGPFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDR-RSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLVVEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPATAAL----SPFPPSPQDATVFSHGPSAPPPEDPAFRSASYHRYDGGYGGAYAGGGDGXXGAYXXXXXXXXXXXXXXXXXXGGSSVSGRAAAAAAAMNE-ECVVCMNSAIHVTFVPCGHQSCCRLCGPLFSECPVCMAPITQVMNTYKV 1968
L PF V G + P A + + Q++GV Y R A+ A EA++PP+W K C CGA F +LRP HCRNCG + C+ C + WP LP+TYLD +++ VC C+ A FR ALR GD G AY+TG VNLRTP+ G Y +HCAAAGGSL L+ WLV+E+G + + P+ D S +++AA + ++++R+L + C +I + EKL+ P AAL P P +PQ + V + S P P+F S + G G A + A M E ECV+C + I+ VPCGH + C C F+ECPVC P+ QV+ T+ V
Sbjct: 14 LRPFQVDTVKGAGATNSNGQRPSWQAIVYQGQTNKLQLVGV-YDSRDEAVAAAEAYSPPLWEQKRGGLGCGNCGAKFALLRPEKHCRNCGRVVCRECARAHWPPRMLPATYLDGAGEKKA-RVCRGCQWAMEDFRAALRRGDAPGVRAAYATGVVNLRTPYT-VHGGEYPVHCAAAGGSLPLLAWLVDERGAFVRDPQSKQR--PLFASDGITSCMSLAAVNGNLEMMRWLTQHE-CSVRDIVNLEHFYAATEKLLA------------------------LPSTGTAGPLNSEPVAAALVDNARPPPFNPQQSVVVASVGSTPI-SAPSFESIT---------------------------------------PSAGIEQQGVTAVSGAGMEENECVICFENNINTVIVPCGHTAVCDGCSGKFTECPVCREPVQQVIKTFGV 387
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE) HSP 1 Score: 166 bits (420), Expect = 2.750e-39 Identity = 93/238 (39.08%), Postives = 131/238 (55.04%), Query Frame = 1
Query: 724 KQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFG-MLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRR-SALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLVVEG 1428
KQDAE P ++ Y + RA E+F+PP+W KD C++C + FG +L+ RHHCRNCG L C C + WP + LP TY + D + V VC+ C A FR A G GAM A+STGCVNLR P+ + + +HCAA+GG+L ++ WLV+++ PL + L RR S + AAA + ++RYL +GC+ EI D L R +EK + +G
Sbjct: 342 KQDAE-------PVEVSVGVYDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTY-NVDTSEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNEL-PVHCAASGGNLNILAWLVDDRCCPLFLDREKKI---ALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDG 567
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A482RTU5_9ARCH (FYVE-type domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTU5_9ARCH) HSP 1 Score: 157 bits (398), Expect = 5.350e-38 Identity = 97/261 (37.16%), Postives = 133/261 (50.96%), Query Frame = 1
Query: 637 LRSRRKKLGPFAV--TLDDNTGRWKALVGMPK---QDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCR 1401
L +RR L P+++ N +W+ + + + EA+ + + P Q+ R V C + APP+W PK TC LC GF M R HHCRNCGH+ C +C+D WPA LPSTY D+ + V VC C F AL+ GDL A+ YS+G +NL P Y +H A +GGSL L+ WL+E + L A+ P+ T +ALAVAA +++ YLI RGC AEI + L R
Sbjct: 154 LVNRRAYL-PYSIERVAGSNGVKWRGTLSLRQPHLSPKEASPQGSRPDQLALSVCPSREVCEDLCVSAAPPLWRPKQASLTCVLCRTGFSMFRKPHHCRNCGHIVCPDCSDRLWPAGMLPSTY---HDQEKVVRVCYACHLLLEHFVLALKRGDLDEALSLYSSGNINLHQPLTVFQHWAYPVHLACSGGSLPLLQWLLEVKRCSLMDRASGK---PLATGSGLTALAVAAYQGHAEIMHYLIHARGCSVAEIGEVDVLQR 407
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.370e-36 Identity = 93/229 (40.61%), Postives = 122/229 (53.28%), Query Frame = 1
Query: 763 QQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGML-RPRHHCRNCGHLCCKNCTD-SWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPL------SFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLVVE 1425
Q+ LGV Y A AC+AFA P K C+LC + FGML R RHHCRNCG C C SWP++ LP TY A + R +C C N FR AL GD A A AY GCVNLR P++ +G+ +HCAA GGS+ L+ WL+EE+ PL + A NG + S +AVAA + ++RYL+ + + EI D L R ++K + E
Sbjct: 7 QEELGV-YETPDAAEEACKAFAVP---KKQNAALCALCKSYFGMLSRRRHHCRNCGRAVCDACAKTSWPSSMLPFTY-SAAKQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGL-PVHCAAEGGSMALLAWLLEEKHCPLFKDLSRTIALGNGR--------KESVMAVAAQNGHTHIMRYLLHKHSVKVNEITDHKALWRALDKALRE 221
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI) HSP 1 Score: 141 bits (355), Expect = 2.940e-34 Identity = 73/173 (42.20%), Postives = 101/173 (58.38%), Query Frame = 1
Query: 724 KQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFG-MLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPL 1236
KQDAE P ++ Y + RA E+F+PP+W KD C++C + FG +L+ RHHCRNCG L C C + WP + LP TY + D + V VC+ C A FR A G GAM A+STGCVNLR P+ + + +HCAA+GG+L ++ WLV+++ PL
Sbjct: 18 KQDAE-------PVEVSVGVYDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTY-NVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNEL-PVHCAASGGNLNILAWLVDDRCCPL 181
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE) HSP 1 Score: 145 bits (365), Expect = 6.820e-32 Identity = 81/198 (40.91%), Postives = 110/198 (55.56%), Query Frame = 1
Query: 760 PQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGML--RPRHHCRNCGHLCCKNCT-DSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYL 1344
P ++ ++ + A RA E F+ P+W T + TC+ C + F + R +HHCRNCG L C C WP LP +Y + RR V VC C S FR AL G GAMEAY TGCVNLR P + D +HCAAAGG+++LM WLVE++ P+ + +P L RS +A AA R++++RYL
Sbjct: 556 PTPLVCGKFATSYEADRAAETFSSPVWHEPTPNSTCAECQSSFRPVFQRRKHHCRNCGRLVCTTCAWRFWPKHMLPHSYRTSSTERR-VRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS---DRELPVHCAAAGGNVSLMMWLVEDRCCPIFMD--DEKTMPHLDGAGRSVMAAAADSGRVEMMRYL 747
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.830e-31 Identity = 81/198 (40.91%), Postives = 111/198 (56.06%), Query Frame = 1
Query: 760 PQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFG--MLRPRHHCRNCGHLCCKNCT-DSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYL 1344
P ++ ++ + A RA EAF+ P+W T + TC+ C + F + R RHHCRNCG L C C WP LP +Y + RR V VC C S FR AL G GAMEA+ TGCVNLR P + D +HCAAAGG+++LM WL+E++ P+ + +P L RS +A AA R++++RYL
Sbjct: 486 PTPLVCGKFATSYEADRAAEAFSSPVWHEPTPNSTCAECQSVFRPVLQRRRHHCRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERR-VRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS---DRELPVHCAAAGGNVSLMMWLLEDRCCPIFMD--DEKTMPHLDGAGRSVMAAAADSGRVEMMRYL 677
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A7S4NIR4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NIR4_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.190e-28 Identity = 110/454 (24.23%), Postives = 168/454 (37.00%), Query Frame = 1
Query: 664 PFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAP------DGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVP--------VLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLV----------VEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPATAALSPF--------PPSPQDATVFSHGPSAPPPEDPAFRSASYHRYDGGYGGAYAGGGDGXXGAYXXXXXXXXXXXXXXXXXXGGSSVSGRAAAAAAAMNEECVVCMNSAIHVTFVPCGHQSCCRLCGPLFSECPVC 1929
P+ VT + +G W A V ++ + A + + + D A A EA+APP P ++ TC C F +LR HCRNCG C C+ WP+ +P T+ + V VC C + FR+AL G+ A ++TG +NL W+P + Y +HCAA GG+ + WL+E Q P++ + A +LT RS L +A + +D++RYL+ ERG I + ++ ++ V G S +T+ P+ P SP DA +F ED + + + D A+ +EC++C I PCGHQ CC C F+ECP+C
Sbjct: 126 PYEVTHNPTSGLWVATVHTNQKALDRGDMAAANKALEAYPFDDEGQARSAAEAWAPPRMHPFAENKTCFCCERKFALLRRPCHCRNCGVCVCSKCSTQWPSRMIPGTFNIKGESM--VHVCGPCDWLSGAFREALLEGNHDRAFALHATGNINL-----WSPFCNLKGEEFYPVHCAAMGGNTSTFRWLIEHQHCPITSSLAGRKKKSGRADANRSLLTSKGRSVLDIAVSKQHVDVLRYLVVERGVSILGIQELRTALLTLDTVLRRLPPENDPSVNAGFSSGIESSPRPESWSSSAAFSNAGAAAAMSALDSTSTSDREPYGTAVAAAGPISPTDAALFQMA------EDVPQMAHTENSED-----------------------------------------------KKASDEDECIICFEREIDCVATPCGHQMCCLECSSGFTECPIC 519
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A1Z5JSH8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSH8_FISSO) HSP 1 Score: 130 bits (328), Expect = 2.030e-27 Identity = 87/257 (33.85%), Postives = 125/257 (48.64%), Query Frame = 1
Query: 652 KKLGPFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVAL---RACEAFAPPIWAP---KTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAP-DGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGL------LVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIAD 1383
+ L P++V + T W + Q + A RN I N S R L A AFA W P K K C +C + F +LR HCRNCG + CK C+ +WP+ +P TY + SV+VC C ++ FR AL G+ A+ ++TG +NL P + +Y +H A GGSL L+ WLV+E P+ +G +P++T RS L +A + +D+VRYLI E+G A D
Sbjct: 591 RTLLPWSVIPNSATNTWTTTI----QTNQNALDRNDRMSIAEANKSLRAFVLPTEEAAVAFAR-AWTPPRMKEKGPNCHICNSKFALLRRPCHCRNCGVVVCKECSVNWPSKMIPDTYNI--KKESSVNVCRSCDWLSSNFRLALLQGNQDRAVALHATGNINLHAPFGNVKGELLYPVHSAVLGGSLPLLKWLVDENSCPIKSLRVSGSREYGGSYIPIVTSKGRSLLGIALENRNVDIVRYLIVEKGVALASEKD 840
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A1Z5KGM8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGM8_FISSO) HSP 1 Score: 130 bits (327), Expect = 2.720e-27 Identity = 86/257 (33.46%), Postives = 127/257 (49.42%), Query Frame = 1
Query: 652 KKLGPFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVAL---RACEAFAPPIWAP---KTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAP-DGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGL------LVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIAD 1383
+ L P++V + T W A + Q + A R+ I N S R L +A AFA W P K K C +C + F +LR HCRNCG + CK C+ +WP+ +P TY + SV+VC C ++ FR AL G+ A+ ++TG +NL P + +Y +H A GGSL L+ WLV++ P+ +G +PV+T RS L +A + +D+VRYL+ E+G A D
Sbjct: 600 RTLLPWSVIPNSATNTWTATI----QTNQNALERSDRMSIAEANKSLRAFVLPTEKAAVAFAR-AWTPPRMKEKGPHCHICNSKFALLRRPCHCRNCGVVVCKECSVNWPSKMIPDTYNI--KKESSVNVCGSCDWLSSNFRLALLKGNQDRAVALHATGNINLHAPFGNVKGELLYPVHSAVLGGSLPLLKWLVDDNSCPIKSLRVSGSREYGGSYIPVVTSKGRSLLGIALENRNVDIVRYLVVEKGVALASEKD 849 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig723.1.1 >prot_P-wetherbeei_contig723.1.1 ID=prot_P-wetherbeei_contig723.1.1|Name=mRNA_P-wetherbeei_contig723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=648bp MATMSPVQSSTPNYSTREVVSSAPPGAMSCSPALATSTTAASPLHGQSPVback to top mRNA from alignment at P-wetherbeei_contig723:651..3643- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig723.1.1 ID=mRNA_P-wetherbeei_contig723.1.1|Name=mRNA_P-wetherbeei_contig723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2993bp|location=Sequence derived from alignment at P-wetherbeei_contig723:651..3643- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig723:651..3643- >mRNA_P-wetherbeei_contig723.1.1 ID=mRNA_P-wetherbeei_contig723.1.1|Name=mRNA_P-wetherbeei_contig723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1944bp|location=Sequence derived from alignment at P-wetherbeei_contig723:651..3643- (Phaeothamnion wetherbeei SAG_119_79)back to top |