mRNA_P-wetherbeei_contig721.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig721.2.1
Unique NamemRNA_P-wetherbeei_contig721.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A7S2V3Y2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Y2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.380e-18
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGGTE 228
            MGV+LSTP+TDK +E GE   L++GAS MQGWR+ MED HLA   +P    +P  +      V++F VFDGHGG E
Sbjct:    1 MGVYLSTPITDKESEEGEHGNLKFGASAMQGWRKGMEDAHLALGQLPHCDGTPRENAE---KVSMFAVFDGHGGCE 73          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A5J4YVU6_PORPP (Protein phosphatase 2C-like 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVU6_PORPP)

HSP 1 Score: 84.3 bits (207), Expect = 1.990e-17
Identity = 43/76 (56.58%), Postives = 49/76 (64.47%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGGTE 228
            MG +LSTPVT K TE G+++ L+Y  S MQGWR SMED H+A LD         G   G   VALFGVFDGHGG E
Sbjct:    1 MGQYLSTPVTQKETETGKNEYLEYAVSAMQGWRISMEDAHIAALD---------GLSDGKKNVALFGVFDGHGGRE 67          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A2J6JK87_LACSA (Protein-serine/threonine phosphatase n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6JK87_LACSA)

HSP 1 Score: 79.0 bits (193), Expect = 2.160e-17
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGG 222
            MGV+LSTP TDK ++ GE++ L+YG S MQGWR SMED H A LD+             + + + FGV+DGHGG
Sbjct:    1 MGVYLSTPKTDKTSDDGENEKLRYGVSSMQGWRTSMEDVHAALLDL-------------DNSTSFFGVYDGHGG 61          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: K0RWB0_THAOC (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RWB0_THAOC)

HSP 1 Score: 77.0 bits (188), Expect = 6.960e-17
Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGG------ESKTLQYGASEMQGWRRSMEDTHLACLDIPAPP-ASPAGSPSGNGTVA--LFGVFDGHGGTE 228
            MG +LSTPV DK TE G       S  +++   +MQGWR+SMED H+A  D+P P  A P+G  +G    A  +F VFDGHGG E
Sbjct:    1 MGTYLSTPVLDKHTERGCDESSDPSAPVRWAVVDMQGWRKSMEDAHVARTDVPPPSCAGPSGGDAGGAAAAAKVFAVFDGHGGAE 85          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A7S0KXU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXU5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 9.470e-17
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGES-----KTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGGTE 228
            MG +LSTPV +K  E GE+       L +G  +MQGWR++MED H+ACLD+  PP           T  +FGVFDGHGG E
Sbjct:    1 MGTYLSTPVLEKGEESGENLDCPVTPLAWGVVDMQGWRKTMEDGHVACLDVEVPPHLDP-KDDARQTAKIFGVFDGHGGPE 80          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A6A6JVC8_9PLEO (Protein phosphatase 2C n=1 Tax=Westerdykella ornata TaxID=318751 RepID=A0A6A6JVC8_9PLEO)

HSP 1 Score: 82.0 bits (201), Expect = 1.500e-16
Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGGTE 228
            MG  LS PV DK++E GES T+ YG S MQGWR SMED H A LD+  PP S     S    ++ FGV+DGHGG +
Sbjct:    1 MGQTLSEPVVDKKSENGESDTIIYGLSSMQGWRISMEDAHAAVLDL-QPPGSDGKPASPENRLSFFGVYDGHGGDK 75          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: D7FIW4_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIW4_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.680e-16
Identity = 40/76 (52.63%), Postives = 46/76 (60.53%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGGTE 228
            MGVFLS P   K +E GE   + +G S MQGWRR+MED HLA LD+   P        G   V +FGVFDGHGG E
Sbjct:    1 MGVFLSKPSVTKFSEDGEDSDVGFGVSSMQGWRRNMEDAHLALLDLQQHPQEGGERQGGGEEVRMFGVFDGHGGKE 76          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A1D6H2J1_MAIZE (Protein-serine/threonine phosphatase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6H2J1_MAIZE)

HSP 1 Score: 77.4 bits (189), Expect = 3.360e-16
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGG 222
            MGV+LSTP TDK +E GE+  L++G S MQGWR +MED H A LD+             +   A FGVFDGHGG
Sbjct:    1 MGVYLSTPKTDKLSENGENDRLKFGLSSMQGWRATMEDAHSALLDL-------------DSETAFFGVFDGHGG 61          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A2U1LQK6_ARTAN (Protein-serine/threonine phosphatase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LQK6_ARTAN)

HSP 1 Score: 79.3 bits (194), Expect = 4.190e-16
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGG 222
            MGV+LSTP TDK +E GE++ ++YG S MQGWR SMED H A LD+             + + + FGV+DGHGG
Sbjct:    1 MGVYLSTPKTDKTSEDGENEKMRYGVSSMQGWRTSMEDAHAAILDL-------------DNSTSFFGVYDGHGG 61          
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Match: A0A8J8NM11_HALGN (PPM-type phosphatase domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NM11_HALGN)

HSP 1 Score: 79.3 bits (194), Expect = 5.670e-16
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 1
Query:    1 MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPPASPAGSPSGNGTVALFGVFDGHGGTE 228
            MG +LSTP  +K++E  E+  L+YG S MQGWRRSMED H+A LDI            G+G VA+FGVFDGHGG E
Sbjct:    1 MGEYLSTPNREKKSEEAENGKLRYGLSAMQGWRRSMEDAHIANLDI------------GDG-VAIFGVFDGHGGGE 63          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig721.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V3Y2_9STRA5.380e-1852.63Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A5J4YVU6_PORPP1.990e-1756.58Protein phosphatase 2C-like 2 n=1 Tax=Porphyridium... [more]
A0A2J6JK87_LACSA2.160e-1750.00Protein-serine/threonine phosphatase n=1 Tax=Lactu... [more]
K0RWB0_THAOC6.960e-1748.24PPM-type phosphatase domain-containing protein (Fr... [more]
A0A7S0KXU5_9STRA9.470e-1748.15Hypothetical protein (Fragment) n=1 Tax=Asterionel... [more]
A0A6A6JVC8_9PLEO1.500e-1653.95Protein phosphatase 2C n=1 Tax=Westerdykella ornat... [more]
D7FIW4_ECTSI1.680e-1652.63PPM-type phosphatase domain-containing protein n=2... [more]
A0A1D6H2J1_MAIZE3.360e-1651.35Protein-serine/threonine phosphatase n=1 Tax=Zea m... [more]
A0A2U1LQK6_ARTAN4.190e-1650.00Protein-serine/threonine phosphatase n=1 Tax=Artem... [more]
A0A8J8NM11_HALGN5.670e-1655.26PPM-type phosphatase domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig721contigP-wetherbeei_contig721:3132..3668 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FIW4
PFAMsPP2C
Model size228
Max annot lvl2759|Eukaryota
KEGG koko:K01090,ko:K04457,ko:K14803,ko:K17499,ko:K17505
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0016020
Exons2
Evalue2.76e-17
EggNOG OGsCOG0631@1|root,KOG0698@2759|Eukaryota
EC3.1.3.16
Descriptionprotein serine/threonine phosphatase activity
Cds size228
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186966.0419502-CDS-P-wetherbeei_contig721:3131..32211683186966.0419502-CDS-P-wetherbeei_contig721:3131..3221Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig721 3132..3221 +
1683186966.0587976-CDS-P-wetherbeei_contig721:3530..36681683186966.0587976-CDS-P-wetherbeei_contig721:3530..3668Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig721 3531..3668 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig721.2.1prot_P-wetherbeei_contig721.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig721 3132..3668 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig721.2.1

>prot_P-wetherbeei_contig721.2.1 ID=prot_P-wetherbeei_contig721.2.1|Name=mRNA_P-wetherbeei_contig721.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=76bp
MGVFLSTPVTDKRTEGGESKTLQYGASEMQGWRRSMEDTHLACLDIPAPP
ASPAGSPSGNGTVALFGVFDGHGGTE
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mRNA from alignment at P-wetherbeei_contig721:3132..3668+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig721.2.1 ID=mRNA_P-wetherbeei_contig721.2.1|Name=mRNA_P-wetherbeei_contig721.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig721:3132..3668+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGTTTTCCTCTCGACACCCGTTACCGATAAGAGGACCGAAGGTGG AGAAAGCAAGACCCTTCAGTATGGCGCGAGCGAGATGCAGGTAAATCTGG GCTTCTCGCTAGTCCTTTTTTGGTTGGTGGTTCAAAGAACTAGTAACGTC TAAACTCTCCACCCCTTCCCACCACTCTGACGTTTCTGCATTGTGGCGTT TCTTTACGCCTGTGTTGAACTAGACCTTCCTTGAATAGTTTTGGTCGCTT TGAACCATTGCCAAAGACTGTCTTCGCGACCTGGGTGGCAGCCGTGGCTT CTTCGTTCAAAAAGAGAGGAATATGTCGATACTGCGCCTCATTGAATCAG AAAGGTCAACTTCTGAAACACCATACCTTTTGCACGAACTGCCTCACAGG GATGGAGGCGATCAATGGAAGACACGCACTTGGCGTGCCTCGATATTCCT GCCCCGCCGGCTTCCCCAGCAGGCTCGCCCAGCGGCAACGGTACCGTCGC CCTGTTTGGCGTTTTTGATGGCCATGGAGGGACCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig721:3132..3668+

>mRNA_P-wetherbeei_contig721.2.1 ID=mRNA_P-wetherbeei_contig721.2.1|Name=mRNA_P-wetherbeei_contig721.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig721:3132..3668+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGTTTTCCTCTCGACACCCGTTACCGATAAGAGGACCGAAGGTGG
AGAAAGCAAGACCCTTCAGTATGGCGCGAGCGAGATGCAGGGATGGAGGC
GATCAATGGAAGACACGCACTTGGCGTGCCTCGATATTCCTGCCCCGCCG
GCTTCCCCAGCAGGCTCGCCCAGCGGCAACGGTACCGTCGCCCTGTTTGG
CGTTTTTGATGGCCATGGAGGGACCGAG
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