mRNA_P-wetherbeei_contig7204.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: D7G7Y2_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y2_ECTSI) HSP 1 Score: 119 bits (299), Expect = 1.470e-29 Identity = 53/91 (58.24%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMRASACQRFLLCDFCGSDGLL 273
NRWAMV PAFLTHMCIGSP+ WSVMSGTIS+ELG +++AA DWS+AE T+P+ +VFA GLAAA+GG+WA + C G++
Sbjct: 39 NRWAMVAPAFLTHMCIGSPWAWSVMSGTISRELGIVSSAAGDWSMAEATMPMSIVFATLGLAAALGGSWAHKVGPRMSMSAASLCFGGGVM 129
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A835Z4T5_9STRA (Major facilitator transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T5_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.660e-28 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMRASACQRFLLCDFCGSDGLL 273
NRWAMVLPAFLTHMCIG+P+ WSVMS T+S+E G +AADWSI T+P+ + FA QG++AA+GG+WA+R + L C GL+
Sbjct: 83 NRWAMVLPAFLTHMCIGTPWAWSVMSSTLSREFGVAGASAADWSITAATMPLSVAFALQGISAALGGSWALRVGPRKAMGLAGLCFGGGLM 173
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A5A8E8W6_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E8W6_CAFRO) HSP 1 Score: 108 bits (271), Expect = 1.050e-25 Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 4 RWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMRASACQRFLLCDFCGSDGL 270
RWAM+ PAFLTHMCIG PY WSVMS +++ELG + +AADWS+A+ TLPI LVFA QG+AAA+ G W ++ C S GL
Sbjct: 109 RWAMMAPAFLTHMCIGHPYAWSVMSSPLTRELGVVAASAADWSLAQATLPISLVFAAQGVAAAVAGPWLANIGPRASMMIAAACFSGGL 197
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A7S1GCY3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCY3_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.890e-25 Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMRASACQRFLLCDFCGSDGLL 273
NRWAMV+PAF TH+CIGSP+GWSV++G + +E GF+T AA DW+ A+ +P+ +VFA QGL+AA +W M+ A C GL+
Sbjct: 47 NRWAMVVPAFATHLCIGSPWGWSVLAGPVGREYGFVTAAAEDWTFAQVAMPMSIVFALQGLSAAAAASWQMKVGARASMATAGACFGGGLV 137
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A0K2U1R3_LEPSM (Uncharacterized protein n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2U1R3_LEPSM) HSP 1 Score: 107 bits (268), Expect = 2.390e-25 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMRASACQRFLLCDFCGSD 264
NRW+M +PAF TH+C+GSPYGWS +SGTI++ELGF+ A+ADWS+ CT P+ ++ AF G+AAA+ G W M+ + FCG
Sbjct: 47 NRWSMFVPAFATHVCLGSPYGWSAISGTINKELGFVAPASADWSLDMCTYPMSIMIAFGGIAAAVFGKWTMKVGTRKAL----FCGGS 130
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A482RXS0_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXS0_9ARCH) HSP 1 Score: 100 bits (249), Expect = 4.070e-24 Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 4 RWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMRASACQRFLLCDFCGSDGLL 273
RW M++PAF+ H+CIGSPY WS+M+ +++ELGF+ ++A DW++ + LP+ LVF FQGLAAA G W ++ + C GLL
Sbjct: 81 RWTMLVPAFMNHLCIGSPYAWSMMADELTRELGFVVSSAQDWTLMQAALPLSLVFIFQGLAAAYFGKWQIKVGVRKSLFAAASCFGGGLL 170
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A7S0STR4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR4_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.940e-20 Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMRASACQRFLLCDFCGSDGLL 273
+RW M +PAF THMCIGSP+ WS+M+ ++E+GF+ AAADWS+ + P+ +VF QG++A+I G W R + GLL
Sbjct: 65 SRWLMAIPAFGTHMCIGSPWAWSIMADVATREIGFVAPAAADWSLMQAAFPLSMVFLLQGVSASIVGKWQARVGPRKAMAAASIAFGGGLL 155
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A482RPS1_9ARCH (MFS transporter (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPS1_9ARCH) HSP 1 Score: 90.1 bits (222), Expect = 6.520e-20 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNWAMR 216
+RW+M++PA H+CIGSPY WS+M+ TI++E GF+ +AA+DWS+ E P+ +VF GL+ +I G W ++
Sbjct: 86 SRWSMIVPAAAIHLCIGSPYAWSLMADTITKEAGFVLSAASDWSLMEAAFPLSIVFVAHGLSGSIFGKWQLK 157
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A7R9YJV2_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YJV2_DIALT) HSP 1 Score: 87.4 bits (215), Expect = 3.500e-18 Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSP-YGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNW 207
NRWAM++PAF TH+C+G P +GWSV+S I +E GF+ +AA DW++ + T+P+ + F F GLA A G W
Sbjct: 17 NRWAMMVPAFTTHLCLGGPGFGWSVLSSAIVREHGFVCSAATDWTLFDVTMPMPIFFTFLGLAGAAFGKW 86
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Match: A0A8J5XFQ0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFQ0_DIALT) HSP 1 Score: 87.4 bits (215), Expect = 3.900e-18 Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 1 NRWAMVLPAFLTHMCIGSP-YGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLVFAFQGLAAAIGGNW 207
NRWAM++PAF TH+C+G P +GWSV+S I +E GF+ +AA DW++ + T+P+ + F F GLA A G W
Sbjct: 66 NRWAMMVPAFTTHLCLGGPGFGWSVLSSAIVREHGFVCSAATDWTLFDVTMPMPIFFTFLGLAGAAFGKW 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7204.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7204.2.1 >prot_P-wetherbeei_contig7204.2.1 ID=prot_P-wetherbeei_contig7204.2.1|Name=mRNA_P-wetherbeei_contig7204.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp MVLPAFLTHMCIGSPYGWSVMSGTISQELGFLTTAAADWSIAECTLPIQLback to top mRNA from alignment at P-wetherbeei_contig7204:2769..3041+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7204.2.1 ID=mRNA_P-wetherbeei_contig7204.2.1|Name=mRNA_P-wetherbeei_contig7204.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=273bp|location=Sequence derived from alignment at P-wetherbeei_contig7204:2769..3041+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7204:2769..3041+ >mRNA_P-wetherbeei_contig7204.2.1 ID=mRNA_P-wetherbeei_contig7204.2.1|Name=mRNA_P-wetherbeei_contig7204.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig7204:2769..3041+ (Phaeothamnion wetherbeei SAG_119_79)back to top |