mRNA_P-wetherbeei_contig7200.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7200.2.1
Unique NamemRNA_P-wetherbeei_contig7200.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: A0A6H5KHX6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX6_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.170e-38
Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 1
Query:   31 RDAYSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            R+AYS  ++WD FY  GEAG ++ GE+Y DWF  Y +L  YL  ++GGARAGRV++LGCG+SE+  KM+ +GW  +  +DF  P I A++  HADK   G+ ++ MDARDM  +  GSFDAVI+KGL D++
Sbjct:   82 REAYSYAEYWDEFYAGGEAGSLKDGESY-DWFFGYSRLAVYLNLHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCNPVIEAMQSAHADKP--GMEWKVMDARDMAELETGSFDAVIDKGLTDSV 209          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: A0A835YJ55_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ55_9STRA)

HSP 1 Score: 134 bits (338), Expect = 7.600e-37
Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 1
Query:    4 EPEEDWREARDAYSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGAR--AGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            E + D+  +R  YS ++FWD FYT  + G+ E GETY DWF+ Y K+R  L+++   AR  AG V+ILGCG+SEL  +M+ DGW+    +DFS P I  +R  H DK   G+ +  MDARDM+ VPDGS   VI+KGL+DA+
Sbjct:   15 EEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETY-DWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKP--GMEWAVMDARDMSGVPDGSVQTVIDKGLIDAL 153          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: A0A8B9AQ00_PHODC (EEF1A lysine methyltransferase 4 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AQ00_PHODC)

HSP 1 Score: 86.7 bits (213), Expect = 5.160e-18
Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 1
Query:   37 AYSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            AY    +WD  Y        + G    DW+  YK L P L  YL   R+ R++++GCG+SEL   M ADG+  V  +D S+  + A++  + DK +  L +  MD RDM +  DGSFDA+I+KG +D++
Sbjct:   13 AYGDPAYWDQRYRQ------DPGPF--DWYQKYKTLAPLLDLYL--RRSHRLLLVGCGNSELGEHMIADGYQDVVNIDISSVVVEAMQKKYQDKPQ--LKYIKMDVRDMNSFEDGSFDAIIDKGTLDSL 129          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: UPI0015CF9870 (EEF1A lysine methyltransferase 4 n=1 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015CF9870)

HSP 1 Score: 85.1 bits (209), Expect = 1.920e-17
Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 1
Query:   40 YSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            Y   ++WD  Y         + E   DWF D+ K +  L+Q++G  +  R+++LGCG+S L   M+  G+ S+T VD+S  C+ A+   HA     GL +  MDAR + A P  +F AV+EKG++DAM
Sbjct:   11 YRSAEYWDERY---------RTEESFDWFGDFSKFQHLLVQHVG--KDARILMLGCGNSSLSWDMYQTGYCSITNVDYSRVCVEAMAQRHAHTP--GLSWVCMDARRL-AFPGATFQAVVEKGVLDAM 124          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: D8SLL2_SELML (Methyltransf_11 domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SLL2_SELML)

HSP 1 Score: 82.8 bits (203), Expect = 1.020e-16
Identity = 44/128 (34.38%), Postives = 73/128 (57.03%), Query Frame = 1
Query:   40 YSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            Y   Q+WD  Y D       +G+   DW+  +K+L+P L +Y+   +  R+++ GCG++ L  +M  +G+  +  +DFS+  I  ++  H    +  L + TMD R+M    D SFDAVI+KGL+D+M
Sbjct:    7 YDDIQYWDKRYLD-------EGDDTFDWYQRFKELKPLLCRYI--KKDSRILMAGCGNAVLSEEMVLNGFKEIVNIDFSSVVIKKMQQRHGHIPQ--LTYVTMDVRNMAVFGDNSFDAVIDKGLMDSM 123          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: A0A6I8NQ01_ORNAN (EEF1A lysine methyltransferase 4 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NQ01_ORNAN)

HSP 1 Score: 83.2 bits (204), Expect = 1.180e-16
Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 1
Query:   19 WREARDAYSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            W E    Y   ++W+  Y D        GE   DWF D    R  L+  L      R+++LGCG+S L  ++   G+  VT +D+S+  IAA++  +A      L +E MDARD+   PDG+FDAV+EKG +DA+
Sbjct:    6 WPEQNVEYREVRYWERRYGD------PTGEAPYDWFGDLASFRHLLLPRLTPKH--RILVLGCGNSTLSYELLCGGFPDVTSIDYSSVVIAAMQARYAHLPT--LRWEVMDARDLR-FPDGAFDAVVEKGTLDAL 129          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: D8RMH9_SELML (Methyltransf_11 domain-containing protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RMH9_SELML)

HSP 1 Score: 82.4 bits (202), Expect = 1.620e-16
Identity = 44/128 (34.38%), Postives = 73/128 (57.03%), Query Frame = 1
Query:   40 YSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            Y   Q+WD  Y D       +G+   DW+  +K+L+P L +Y+   +  R+++ GCG++ L  +M  +G+  +  +DFS+  I  ++  H    +  L + TMD R+M    D SFDAVI+KGL+D+M
Sbjct:    7 YDDIQYWDKRYLD-------EGDDTFDWYQRFKELKPLLCRYI--KKDSRILMAGCGNAVLSEEMVLNGFKEIVNIDFSSVVIKKMQQRHRHIPQ--LTYVTMDVRNMAVFGDNSFDAVIDKGLMDSM 123          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: A0A6V1RBJ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBJ9_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 2.010e-16
Identity = 49/136 (36.03%), Postives = 79/136 (58.09%), Query Frame = 1
Query:   19 WREARDAYSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAMA 426
            W++ + +Y+ + +WD+FY           +TYE WF++Y  L+  L   +   +  ++I+LGCG+S L   M+ +GW S++ VD+S   I  +   H  K    L +  MDARD+   P+ S+ AVI+KGL+DAMA
Sbjct:   87 WQDPQ-SYATRSYWDDFYK-------ANSDTYE-WFLEYNDLQSSLNTKV--PKEHQIIMLGCGNSNLTIDMYNNGWKSISNVDYSPLVIEQMAAKH--KGIGDLSWHQMDARDLR-FPENSYGAVIDKGLLDAMA 208          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: A0A1V9Z051_9STRA (Methyltransferase-like protein 13-like isoform X1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z051_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.190e-16
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 1
Query:   28 ARDAYSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            AR  Y   ++WD  Y        E   T  D + +Y  ++  L  +   A+A R++I+GCG+S +   M A G+  VT +DFS+  I  L      K +  + +  MD RDM+A  DGSFDAVI+KG++D++
Sbjct:    3 ARPDYGSPEYWDARYIS------EGNRTSHDCYFNYAAIQKGLEPFFKPAKAERILIVGCGTSTMGEDMLAAGFRDVTCMDFSSAAIRILTQRQVVK-QPSIKYLVMDVRDMSAFSDGSFDAVIDKGVLDSV 127          
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Match: A0A836CEF7_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF7_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 6.020e-16
Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 1
Query:   40 YSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRPYLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALRLLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAM 423
            +S K++W  F+        ++ E +E W+ +Y+ L+  + + LG + A +V+++GCG+S   A ++ DG+  VT VDF    IA +   H  +    + +  MD  DM A+PD SFDA+I+KG +DA+
Sbjct:   11 FSSKEYWKTFFE-------QRSEAFE-WYGNYRDLQALVRRALGSSNA-QVLVVGCGNSSFSADLYDDGFPHVTNVDFEERVIADMSRQHIRRRPL-MRWRVMDMTDMRALPDASFDAIIDKGAIDAL 128          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7200.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHX6_9PHAE1.170e-3851.15Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A835YJ55_9STRA7.600e-3748.59S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A8B9AQ00_PHODC5.160e-1837.98EEF1A lysine methyltransferase 4 n=1 Tax=Phoenix d... [more]
UPI0015CF98701.920e-1737.50EEF1A lysine methyltransferase 4 n=1 Tax=Electroph... [more]
D8SLL2_SELML1.020e-1634.38Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A6I8NQ01_ORNAN1.180e-1637.04EEF1A lysine methyltransferase 4 n=1 Tax=Ornithorh... [more]
D8RMH9_SELML1.620e-1634.38Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A6V1RBJ9_HETAK2.010e-1636.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V9Z051_9STRA5.190e-1635.61Methyltransferase-like protein 13-like isoform X1 ... [more]
A0A836CEF7_9STRA6.020e-1634.38Methyltransf_11 domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7200contigP-wetherbeei_contig7200:2124..2955 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5786.XP_003293706.1
PFAMsMethyltransf_11
Model size429
Max annot lvl554915|Amoebozoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.66e-20
EggNOG OGsKOG2352@1|root,KOG2352@2759|Eukaryota,3XAMQ@554915|Amoebozoa
Ec32 ortholog descriptionMethyltransferase type 11
Ec32 orthologEc-06_009800.1
DescriptionubiE/COQ5 methyltransferase family
Cds size429
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186965.1809592-CDS-P-wetherbeei_contig7200:2123..22381683186965.1809592-CDS-P-wetherbeei_contig7200:2123..2238Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7200 2124..2238 +
1683186965.1905587-CDS-P-wetherbeei_contig7200:2387..25231683186965.1905587-CDS-P-wetherbeei_contig7200:2387..2523Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7200 2388..2523 +
1683186965.1991804-CDS-P-wetherbeei_contig7200:2777..29551683186965.1991804-CDS-P-wetherbeei_contig7200:2777..2955Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7200 2778..2955 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7200.2.1prot_P-wetherbeei_contig7200.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7200 2124..2955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7200.2.1

>prot_P-wetherbeei_contig7200.2.1 ID=prot_P-wetherbeei_contig7200.2.1|Name=mRNA_P-wetherbeei_contig7200.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=143bp
MEPEEDWREARDAYSRKQFWDNFYTDGEAGDVEKGETYEDWFVDYKKLRP
YLIQYLGGARAGRVIILGCGSSELPAKMFADGWSSVTGVDFSAPCIAALR
LLHADKAEAGLHFETMDARDMTAVPDGSFDAVIEKGLVDAMA*
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mRNA from alignment at P-wetherbeei_contig7200:2124..2955+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7200.2.1 ID=mRNA_P-wetherbeei_contig7200.2.1|Name=mRNA_P-wetherbeei_contig7200.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=832bp|location=Sequence derived from alignment at P-wetherbeei_contig7200:2124..2955+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCCTGAGGAGGATTGGCGAGAGGCGCGTGATGCCTACTCCCGGAA GCAATTCTGGGACAATTTCTACACGGACGGCGAAGCAGGAGATGTTGAGA AGGGCGAGACTTACGGTGAGATCGAGGAATTCTTGAGTTCCACGCTTTCG ACAGAGTCTTTTTCCCCGTATAACTTCCTGTATTTTACGTCAAACTGTAT TTTTAGGCAGAGCTTTACATGCATGTTCCCATTCTCCCTTTTCTCCTCCC TTCTGTCTGCTGAGAAGACTGGTTTGTGGACTACAAGAAGCTGCGGCCCT ACCTAATACAATACCTGGGTGGTGCGCGTGCCGGGCGAGTCATCATCCTC GGCTGCGGTAGCTCAGAGCTGCCTGCCAAGATGTTCGCCGACGGGTGGAG GTGATAATCTTGTTGGAAGAGAGGAGGACTTGTACACCGCTTGTGAGTGA GCTTGCAGCGACTAGTTCGCTGTAAATTTTCGCTTCAGGGATGAGGAGGT GAGCGTGTTTGTGTCGTGGTGTTATCTTTAGCTGACTGTCCGCTCGCTGC CTCGACGGCGCCATGCGCTCATGCTCCGTTCCCGCGGGGCTGTTGTCCCT CCTTTTCCTTTTCGCTGCCTTTTCGTCCTGTTTCGCCCTTTCCATTCCCT CCAGCTCGGTGACGGGGGTGGACTTTAGCGCACCGTGTATCGCGGCGCTG CGACTGCTCCACGCTGACAAGGCAGAAGCGGGGCTGCACTTTGAGACGAT GGATGCGCGGGACATGACGGCGGTCCCCGACGGCTCCTTCGACGCCGTCA TCGAGAAGGGGCTCGTTGACGCCATGGCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7200:2124..2955+

>mRNA_P-wetherbeei_contig7200.2.1 ID=mRNA_P-wetherbeei_contig7200.2.1|Name=mRNA_P-wetherbeei_contig7200.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=429bp|location=Sequence derived from alignment at P-wetherbeei_contig7200:2124..2955+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCCTGAGGAGGATTGGCGAGAGGCGCGTGATGCCTACTCCCGGAA
GCAATTCTGGGACAATTTCTACACGGACGGCGAAGCAGGAGATGTTGAGA
AGGGCGAGACTTACGAAGACTGGTTTGTGGACTACAAGAAGCTGCGGCCC
TACCTAATACAATACCTGGGTGGTGCGCGTGCCGGGCGAGTCATCATCCT
CGGCTGCGGTAGCTCAGAGCTGCCTGCCAAGATGTTCGCCGACGGGTGGA
GCTCGGTGACGGGGGTGGACTTTAGCGCACCGTGTATCGCGGCGCTGCGA
CTGCTCCACGCTGACAAGGCAGAAGCGGGGCTGCACTTTGAGACGATGGA
TGCGCGGGACATGACGGCGGTCCCCGACGGCTCCTTCGACGCCGTCATCG
AGAAGGGGCTCGTTGACGCCATGGCGTGA
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