mRNA_P-wetherbeei_contig717.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig717.2.1
Unique NamemRNA_P-wetherbeei_contig717.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 5.380e-58
Identity = 157/468 (33.55%), Postives = 213/468 (45.51%), Query Frame = 3
Query:   84 MARPVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYE---ELPGSIGTTSFFN--AGPSRIPFWLSESG----ESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAG-------------------PPVVASLQEENGRNAAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEIV 1403
            MA+ VSI DGEV RN+ LV   G +H+L++ HD ++GARAA+LDYE   E+PGS GTT+ FN  AG   IPF + +      ++G L + R GL GF Y CE+ G+ +L+TT+ V N E E+EV+VP          D  S               GV WYE+   R+ D+  T VHRRFRDF  L EQV                                                                                                        + LMKGHHLR+SLPR P K  KL  +HGD  F +ERR+ L+ +L+ LL LPHV  LD+TRAFLG++GN RE+SV ++ ++LG  L+ +  +AG                   PPV+ S+    G   +P  V  GDR+ K+ G   E M   A  + +A   RP+++HFL  I+
Sbjct:    1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAKEEVPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYEVSVPATV-------DTGSRV------------RGVTWYEVHTMRKADSKGTLVHRRFRDFHALQEQV--------------------------------------------------------------------------------------------------------ESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVL---GNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPIL 342          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA)

HSP 1 Score: 201 bits (511), Expect = 3.590e-52
Identity = 151/460 (32.83%), Postives = 203/460 (44.13%), Query Frame = 3
Query:   63 LTSSAAEMARPVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNA--GPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAGPPVVASLQEENGRN------------AAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEI 1400
            L S+   MA   S+F GE+ R++E +   G RHVLS++HD VSGARA LLDY EL  S GT++  N   G ++I F +  +GE G LE+ R G+ G++YRCE+ GR I ETT+KV N E EF+V +P            +S    A     QP    V WY L VRR RD + T VHRR+ DF  LH+Q                                                                                                         DG+MKGHHL  SLP LP K    ++D  D  F + RR +LQ +LR LL +PHVG LDTTRAFLG++G+ RE S V      G         AG  + A +Q +   +             AP+ V+VGD + ++GGA +EG     V   +  +P+P LVH ++ +
Sbjct:   81 LDSAVRSMA---SVFSGEINRHWEFLDSAGGRHVLSLIHDCVSGARACLLDYAELKDSAGTSNCLNLLFGAAKIAFEVKATGEWGKLEIRRSGILGYQYRCEVDGRAIRETTSKVNNQEHEFDVRIP------------SSVQACAYKGGDQPN---VTWYLLRVRRLRDGACTEVHRRYTDFEMLHQQC--------------------------------------------------------------------------------------------------------DGMMKGHHLSDSLPPLPCK--SPLLDRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRERSFVVSGGAAG------GGGAGFALTADVQGDGLSDPHGFLTVAQLLRGAPAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 2.220e-37
Identity = 116/386 (30.05%), Postives = 161/386 (41.71%), Query Frame = 3
Query:  303 ESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAG-------------------PPVVASLQEENGRNAAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEIV 1403
            ++G L + R GL GF Y CE+ G+ +L+TT+ V N + E+EV+VP    A V    + S               GV WYE+   R+ D+  T VHRRFRDF  L EQV                                                                                                        + LMKGHHLR+SLPR P K  KL  +HGD  F +ERR+ L+ +L+ LL LPHV  LD+TRAFLG++GN RE+SV ++ ++LG  L+ +  +AG                   PPV+ S+    G   +P  V  GDR+ K+ G   E M   A  + +A   RP+++HFL  I+
Sbjct:   10 DNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVP----ATVDTGSRVS---------------GVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQV--------------------------------------------------------------------------------------------------------ESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVL---GNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPIL 269          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 7.080e-37
Identity = 122/441 (27.66%), Postives = 184/441 (41.72%), Query Frame = 3
Query:   96 VSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAGPPVVASLQEENGRNAAPSEVSVGDRVSKIGGAPV------EGMPFAAVINLMASLPRPLLVHFLTEI 1400
             ++  GEV R++  +S  G +HV+ + HDTV+G R+  +  EE+PGS+G++ FF+     I F + +    G + + + GLF FRY C + GR +  T   +A+                  D+++ + A   A  A     + V WYEL+V R  D + T VHRR+R+F  L EQV                                                                                H A                         KGHHLR+SLP LP + LKL++DH D  F +ERR  L+  L  LL +PHVG +   + FLG     +E+SV+F ++ LGL +  +  +    +V +  +E G     S V VGD +SK+GG PV      +G+ F     L     RP+++HFL  +
Sbjct:    4 TNVLQGEVHRSWVWLSPAGAKHVIDLWHDTVTGVRSVAVGMEEVPGSMGSSPFFSTEAHHINFTVGQDQCRGMVIIEKAGLFSFRYTCVVNGRPLKATLQGLADE-----------------DEERFNIAILGAANAYSSKEKSVTWYELTVTRGSDGARTLVHRRYREFVCLFEQV--------------------------------------------------------------------------------HAA------------------------FKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITRTV-VPEESIVVTRVKEAGPGGQKSRVMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGL-----RPIVIHFLEAV 317          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S2DHE0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHE0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.200e-25
Identity = 79/201 (39.30%), Postives = 101/201 (50.25%), Query Frame = 3
Query:   96 VSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESG---ESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGE--------------------GVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVR 629
            VS+  GEV R++    Q GR H +S+ H TV+GARAA+LDYEELPGS+GT+S F+     IPF +S +      G L + RHG+FGFRY C + GR + E T  V       +VT  +         D     G    PA+   G                      VAWY L V RR D + T VHRRFRDF  L  Q++
Sbjct:   12 VSVLSGEVNRSWLFPDQDGRVHEVSLYHHTVTGARAAMLDYEELPGSLGTSSMFHTTHG-IPFSVSSTSGVITEGSLNIHRHGVFGFRYSCLVAGRVVPECTLMVDRKTAGNDVTPQQH--------DVTQHGGLLPSPAIMDAGVVVSIDDXXXXXXXXXXXXELSVAWYSLRVVRRSDQATTTVHRRFRDFVELASQLQ 203          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A6U1MRC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MRC3_9STRA)

HSP 1 Score: 109 bits (273), Expect = 8.010e-23
Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  933 QVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVL-------QPSPRLAGPPV-------VASLQEENGRNAAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEIVP 1406
            ++   +KG+HL +SLP LP KH+KL++DH D  F ++RR +L+D+LR LL +P V  +    +FLGI    RE+S+V + Q LGL +        PS     P         V  +Q  + R      V  GD +SK+ G PV  + F  ++  ++SLPRP ++HFL ++ P
Sbjct:   44 EMQAALKGNHLCSSLPPLPEKHVKLLLDHEDPEFVEQRRSELEDYLRRLLNMPFVTGMYQVHSFLGIARQLREFSIVVESQSLGLTVAEVRNDWSPSGATVAPSTNRERSFRVTEIQSPDLRQV----VREGDILSKVNGHPVGPLSFPELMRQLSSLPRPFVMHFLQKLAP 211          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S3NJE9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJE9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.630e-18
Identity = 63/186 (33.87%), Postives = 103/186 (55.38%), Query Frame = 3
Query:   93 PVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGE------GVAWYELSV-RRRRDNSVTNVHRRFRDFATLHEQVR 629
            PVSIF GEVCR+++   + G +H +S+ H  ++GARAA++D+EEL GS+GT+S F+A  + +PF    +   G + ++R  L GF Y C + G  + E T   +  ++    T  RF   +  +D+  +A+  + V +     +       +AWY ++    R    +T VHRRFRDF  L E ++
Sbjct:    2 PVSIFAGEVCRSWKFEDREGIKHEVSLWHHPLTGARAAMVDHEELEGSLGTSSVFHAARTSMPFQAGSA--HGIISINRASL-GFEYACSVDGILVPEATTAQSREKIPGYAT--RF---NPSEDEIQTASYTSRVESYATSRDHAQPTLAIAWYCVATFETRSGRELTRVHRRFRDFVELDESIQ 179          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: F0YDA6_AURAN (PX domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA6_AURAN)

HSP 1 Score: 100 bits (249), Expect = 6.150e-18
Identity = 67/189 (35.45%), Postives = 90/189 (47.62%), Query Frame = 3
Query:   96 VSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELE----------FEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSV--TNVHRRFRDFATLHEQV 626
            VSIF GEV R +      G+ H +S+ H  ++GARAAL+D+EEL GS+GT+S F+   + IPF     G  G + + R   FGF Y C   G  + E T+  A+P               V   R   AHV   D AS +              + WY +     + + V  T VHRRFRDFA L E +
Sbjct:    2 VSIFSGEVNRTWRFCDGGGQHHEVSLYHHPLTGARAALVDHEELEGSLGTSSVFHGSTTTIPFACG--GCRGAIHIQRSAFFGFSYACSADGVSVPEATSATADPRRAPGHAGRSGPALRVNSCR-VLAHVTTRDHASPSAP------------IVWYLIETHASKGDEVATTRVHRRFRDFADLDEAI 175          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.540e-17
Identity = 61/186 (32.80%), Postives = 98/186 (52.69%), Query Frame = 3
Query:   78 AEMARPVSIFDGEVCRNFELVSQHG-RRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVRE 632
            A +   VS+F+G++ R +    +HG ++HVL++ HDT+SG R+A+LDY+E+ GS+G +S          F+  E+   G++E+ R G   F Y C +  R+I E T  V  PE +  V  P         DD++                 +AWY +   R  D + + VHRRFR+FA L+ Q+++
Sbjct:   10 ANLLPMVSVFEGQLTRTW--FYEHGEKKHVLNLYHDTISGVRSAMLDYQEIRGSLGNSSLLMDSKGHRIFFTIEN-LPGYIEIKRSGWTSFVYSCCINDRDIKEATQGV--PENQDVVFKPTILDTVFTVDDQSEFQ--------------IAWYVVKTTRITDGATSTVHRRFREFAELNSQIKQ 176          
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S2UVB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.730e-13
Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 3
Query:   96 VSIFDGEVCRNFELVSQHG--RRHVLSIVHDTVSGARAALLDYEELPGSIGTTS-FFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANP 410
            VS++ GE+ R +  V   G  + HV+++ HDT++G R A++DYEE+ GS+GT+S   ++    IPF ++     G + +++ GL GFRY C +    ++ET  +   P
Sbjct:    2 VSLWSGELNRTWRFVDPEGGDKEHVVTLYHDTITGVRCAMMDYEEIQGSMGTSSVLMSSSGVNIPF-IAGGRHIGRIHIAKDGLLGFRYECWVGNTRLVETLQQSQMP 108          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JS20_9PHAE5.380e-5833.55PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A835YSM5_9STRA3.590e-5232.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LMZ7_ECTSI2.220e-3730.05PX domain containing protein (Partial) (Fragment) ... [more]
A0A4D9CLT8_9STRA7.080e-3727.66PX domain-containing protein n=3 Tax=Monodopsidace... [more]
A0A7S2DHE0_9STRA1.200e-2539.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U1MRC3_9STRA8.010e-2336.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3NJE9_9STRA4.630e-1833.87Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YDA6_AURAN6.150e-1835.45PX domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A7S3M5K7_9STRA1.540e-1732.80Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2UVB3_9STRA8.730e-1335.19Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig717contigP-wetherbeei_contig717:2979..6260 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog44056.XP_009038266.1
PFAMsGMC_oxred_C,GMC_oxred_N,HbrB,His_Phos_1,PAN_4
Model size2207
Max annot lvl2759|Eukaryota
KEGG koko:K06236,ko:K19069
KEGG Pathwayko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.72e-32
EggNOG OGsCOG0588@1|root,KOG0235@2759|Eukaryota
Ec32 ortholog descriptionPhox homologous domain
Ec32 orthologEc-16_001220.1
EC1.1.99.18
Descriptionregulation of pentose-phosphate shunt
Cds size2124
COG categoryG
BRITEko00000,ko00001,ko00536,ko01000,ko04516
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186963.090195-CDS-P-wetherbeei_contig717:2978..39441683186963.090195-CDS-P-wetherbeei_contig717:2978..3944Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig717 2979..3944 -
1683186963.099846-CDS-P-wetherbeei_contig717:4197..43531683186963.099846-CDS-P-wetherbeei_contig717:4197..4353Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig717 4198..4353 -
1683186963.107864-CDS-P-wetherbeei_contig717:4907..55881683186963.107864-CDS-P-wetherbeei_contig717:4907..5588Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig717 4908..5588 -
1683186963.1158576-CDS-P-wetherbeei_contig717:5856..61771683186963.1158576-CDS-P-wetherbeei_contig717:5856..6177Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig717 5857..6177 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186963.1294315-UTR-P-wetherbeei_contig717:6177..62601683186963.1294315-UTR-P-wetherbeei_contig717:6177..6260Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig717 6178..6260 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig717.2.1prot_P-wetherbeei_contig717.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig717 2979..6177 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig717.2.1

>prot_P-wetherbeei_contig717.2.1 ID=prot_P-wetherbeei_contig717.2.1|Name=mRNA_P-wetherbeei_contig717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=708bp
MARPVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPG
SIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREIL
ETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVA
WYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKK
SDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQG
KIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPR
LPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGI
LGNTREYSVVFKRQKLGLVLQPSPRLAGPPVVASLQEENGRNAAPSEVSV
GDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEIVPPRPPPSSPP
VYRGAQQDYDATPPAALFVAPLSGSSGGCGGGGGGGWADAGAATRRQAPA
AVVPRTIEEREPGYPPAQEGAWYGPPANGGSGKTHAAVAGGRSSGANGGG
YDDGDAWADRGPPRDVYRGDRHGGADGGAEGGAVAGGSFHGSNSGGVSSG
SFYRGDGSRAQATARPAASAAPEFSGQRSPGTQNAWGWSSNASAAAGCGP
AAGFSATRGSRFSATPASSAPPSYGNGGAEVKEKDPFLGGSSGGAMMGLG
AIGSHHHH
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mRNA from alignment at P-wetherbeei_contig717:2979..6260-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig717.2.1 ID=mRNA_P-wetherbeei_contig717.2.1|Name=mRNA_P-wetherbeei_contig717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3282bp|location=Sequence derived from alignment at P-wetherbeei_contig717:2979..6260- (Phaeothamnion wetherbeei SAG_119_79)
CATATTCGATGATCGAGCCGAGGAAAAATCGCCTTGGTTGACACGGCGCC GCCTTACGTCGCCTAACTTCCTCGGCGGCCGAAATGGCTCGCCCGGTCTC GATATTCGACGGAGAGGTGTGCCGGAATTTTGAGCTCGTCAGCCAGCACG GTCGTCGGCACGTCCTCAGCATAGTCCACGATACTGTCAGCGGAGCTCGG GCTGCACTCCTCGACTATGAAGAGCTCCCGGGCTCGATAGGAACAACGAG CTTCTTTAACGCGGGGCCCAGTCGCATCCCCTTCTGGCTGTCGGAGAGCG GGGAGTCTGGCTTTCTGGAAGTCTCGCGCCACGGCTTGTTTGGCTTCAGA TACCGCTGCGAGCTCCAAGGGCGAGAGATTCTTGAGACTACAGCGAAAGT GGCGGTAAGTAGTGCGCTTTATTTCGTTTTCTTGCTTCATCGCTTTCATA ATTCTCTGAGGAGTTGTCGTTCTCCCACGTCCTCCTCCCGCTGCCACAAA TTTTGTTGGAACGAGCCTATTGCAAATGTTCTCGTTTCACTCTGAAACGC CGACTTCCTTTCTTTATTTCTTAGGCGCGCTTTCACGTTAAAACTCCTGT AGCCGTACTTGCCAACCTTTGGCGCTCCTTTATCTCCGCCACCCCAAACC GTCCAATTCCTTCCCCGTTCAGAACCCGGAGCTGGAATTCGAAGTGACGG TGCCGCGCTTCACCTACGCCCACGTCTGCGACGACGACAAGGCGAGCGCC GCCGGCGCCGCCGCGGTGCCAGCGGTGCAGCCCGGTGGCGAGGGCGTGGC GTGGTACGAGCTGTCGGTGCGGCGGCGGCGCGACAACAGCGTTACCAATG TCCACCGCCGCTTCCGAGACTTCGCCACGCTGCATGAGCAGGTGAGAGAG TGGGGAGGAGTTTTGGACGTGCCGTGTCTCTCACAAGAGAGTAGAAAGAA AAGTGATCCGATATTGGGGGATCTTGTTCGTGGAGATTCTTGGACTGCGG TGTGGTCGGGTGAAACCACGTCTGTAAGAAGACATGCGAAAGCTCGCAGG TGTCCAAAACTGTGTTTTAAAGCGAAGAAGACAGGTGGCCTCGTTCAAGG GAAGATAGAAAAGAGGTGTACCATTATTACACTCCATCCAGCTCACAGAG AAATGGACTTATCGGCGGGCAAATCAAATCGAGTTGGACGCAAAATCAAT CAGGTTGACGGCCTGATGAAGGGGCATCACCTGCGGGCGTCGCTGCCCCG ACTGCCCAACAAGCATCTCAAGCTGGTCATCGACCACGGTGACCGCCGCT TTGCCGACGAGCGCCGCGAGCAGCTCCAGGACTTCCTCCGGATACTGCTG CCGGCGAGTAATTTGAGACAGGCCGGGGTGGATTTGTTTATTTCTTGTTC CGTTGTTTTCCTCCTCTCCTTTTCTCCTCTTTGCTTCCCTGTTTCTTCGA CCTACATTAAATGTTAGTCTGGTTCCGGCCCCTGCCACGGCCGCGTTACG CCGATGGCGACGAGTGCTGCTGTACTAAGTCTCTCGGAAGTGGTGGCCTG TGCATTGACACAGATAATTTTCTGTTATGCGCTGCGGGAGGGCCTTGGAA CGCTGTTTTGCTTGCGTAAGCGGGTTATTAGGGATCGTCGCTTCAGCGGA TGGAAGGCATGAAAAGCACGCCCTACAACTCTTTTGCTGTCGTTGGTGGG TAGGATGCCCACATTTTTGCAGGGAGACACACGTTCTCTTCTATTAATTT TGATCACAGTGCGTGCAGCCACTAACACGCCCTCTTGAGGTCTGACATCT CTGTTTCTGTCGTTCGTTCTTTTCTCAACGATGCATTGGTTCCTTTAAAG AAGTGCCTTTCTCCATGATTCATCGACCTTTCTCCGCCTTTAATCTCCTC GAAACAGCTGCCACACGTGGGCGACCTGGACACTACGCGGGCGTTCCTCG GCATCCTCGGCAACACGCGCGAGTACTCCGTCGTCTTCAAGCGGCAAAAG CTTGGCCTCGTGCTGCAGCCGTCGCCGCGTCTCGCCGGGCCCCCCGTTGT GGCCAGCCTGCAGGTGCGCAGCGGTGCCGTTTGGTGCAGTAGCTACCTGG GGTTTCGCATGGAGTTTTGACTAGGTTTTGGTCCAAACCAGCCGCGCATT TCCGTCGGAATGACTGTCTTAAATGCTGCGATGTCTTCTTCAGGTCGGTT TTCTATAGTAAGGGTCGCATGGCGGGTGACGCACAGGTTTAAGGATCTTG TATTTCTTCCTTTGCCCTTTCTTCCAGTTCGAGTCATCCATACAACTCTA CTGTCCCGCCAAACAGGAGGAGAACGGCCGAAACGCCGCGCCGTCCGAAG TTTCTGTCGGCGACCGCGTCTCCAAGATCGGAGGCGCTCCGGTCGAGGGG ATGCCGTTCGCGGCGGTTATAAACCTCATGGCATCGCTACCGCGGCCGCT GCTGGTGCATTTCTTGACAGAGATCGTCCCACCGAGGCCGCCGCCGTCGT CACCGCCGGTATATCGAGGAGCACAGCAGGACTACGATGCGACGCCGCCA GCGGCGCTTTTCGTTGCTCCACTTTCGGGCAGCAGTGGTGGTTGCGGCGG CGGTGGCGGCGGTGGCTGGGCGGATGCCGGAGCGGCGACGCGGCGTCAGG CGCCGGCAGCCGTCGTGCCACGGACGATAGAGGAGCGGGAGCCGGGCTAC CCGCCGGCGCAGGAAGGCGCCTGGTACGGACCACCCGCGAACGGTGGCAG CGGCAAGACGCACGCGGCGGTGGCGGGCGGAAGGAGCAGTGGCGCCAACG GCGGCGGCTACGATGATGGAGATGCGTGGGCCGACCGCGGCCCGCCACGA GATGTCTACAGAGGCGACAGGCACGGCGGCGCGGATGGCGGCGCGGAGGG CGGCGCTGTCGCCGGCGGCTCCTTTCACGGAAGCAACAGTGGCGGTGTCT CGAGCGGCTCCTTCTACAGAGGCGACGGCTCCAGAGCGCAAGCCACGGCA AGACCAGCCGCATCAGCAGCGCCGGAATTTTCCGGCCAACGAAGTCCAGG GACGCAGAATGCTTGGGGTTGGAGTTCCAACGCATCGGCAGCAGCAGGGT GCGGGCCGGCTGCAGGGTTCTCGGCAACTAGGGGCAGCAGGTTCTCGGCA ACACCGGCGTCGTCGGCGCCGCCGTCTTACGGCAACGGCGGGGCAGAAGT GAAGGAAAAAGATCCCTTTCTCGGAGGCAGCAGCGGCGGCGCAATGATGG GGCTTGGCGCCATCGGAAGCCACCACCACCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig717:2979..6260-

>mRNA_P-wetherbeei_contig717.2.1 ID=mRNA_P-wetherbeei_contig717.2.1|Name=mRNA_P-wetherbeei_contig717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2124bp|location=Sequence derived from alignment at P-wetherbeei_contig717:2979..6260- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTCGCCCGGTCTCGATATTCGACGGAGAGGTGTGCCGGAATTTTGA
GCTCGTCAGCCAGCACGGTCGTCGGCACGTCCTCAGCATAGTCCACGATA
CTGTCAGCGGAGCTCGGGCTGCACTCCTCGACTATGAAGAGCTCCCGGGC
TCGATAGGAACAACGAGCTTCTTTAACGCGGGGCCCAGTCGCATCCCCTT
CTGGCTGTCGGAGAGCGGGGAGTCTGGCTTTCTGGAAGTCTCGCGCCACG
GCTTGTTTGGCTTCAGATACCGCTGCGAGCTCCAAGGGCGAGAGATTCTT
GAGACTACAGCGAAAGTGGCGAACCCGGAGCTGGAATTCGAAGTGACGGT
GCCGCGCTTCACCTACGCCCACGTCTGCGACGACGACAAGGCGAGCGCCG
CCGGCGCCGCCGCGGTGCCAGCGGTGCAGCCCGGTGGCGAGGGCGTGGCG
TGGTACGAGCTGTCGGTGCGGCGGCGGCGCGACAACAGCGTTACCAATGT
CCACCGCCGCTTCCGAGACTTCGCCACGCTGCATGAGCAGGTGAGAGAGT
GGGGAGGAGTTTTGGACGTGCCGTGTCTCTCACAAGAGAGTAGAAAGAAA
AGTGATCCGATATTGGGGGATCTTGTTCGTGGAGATTCTTGGACTGCGGT
GTGGTCGGGTGAAACCACGTCTGTAAGAAGACATGCGAAAGCTCGCAGGT
GTCCAAAACTGTGTTTTAAAGCGAAGAAGACAGGTGGCCTCGTTCAAGGG
AAGATAGAAAAGAGGTGTACCATTATTACACTCCATCCAGCTCACAGAGA
AATGGACTTATCGGCGGGCAAATCAAATCGAGTTGGACGCAAAATCAATC
AGGTTGACGGCCTGATGAAGGGGCATCACCTGCGGGCGTCGCTGCCCCGA
CTGCCCAACAAGCATCTCAAGCTGGTCATCGACCACGGTGACCGCCGCTT
TGCCGACGAGCGCCGCGAGCAGCTCCAGGACTTCCTCCGGATACTGCTGC
CGCTGCCACACGTGGGCGACCTGGACACTACGCGGGCGTTCCTCGGCATC
CTCGGCAACACGCGCGAGTACTCCGTCGTCTTCAAGCGGCAAAAGCTTGG
CCTCGTGCTGCAGCCGTCGCCGCGTCTCGCCGGGCCCCCCGTTGTGGCCA
GCCTGCAGGAGGAGAACGGCCGAAACGCCGCGCCGTCCGAAGTTTCTGTC
GGCGACCGCGTCTCCAAGATCGGAGGCGCTCCGGTCGAGGGGATGCCGTT
CGCGGCGGTTATAAACCTCATGGCATCGCTACCGCGGCCGCTGCTGGTGC
ATTTCTTGACAGAGATCGTCCCACCGAGGCCGCCGCCGTCGTCACCGCCG
GTATATCGAGGAGCACAGCAGGACTACGATGCGACGCCGCCAGCGGCGCT
TTTCGTTGCTCCACTTTCGGGCAGCAGTGGTGGTTGCGGCGGCGGTGGCG
GCGGTGGCTGGGCGGATGCCGGAGCGGCGACGCGGCGTCAGGCGCCGGCA
GCCGTCGTGCCACGGACGATAGAGGAGCGGGAGCCGGGCTACCCGCCGGC
GCAGGAAGGCGCCTGGTACGGACCACCCGCGAACGGTGGCAGCGGCAAGA
CGCACGCGGCGGTGGCGGGCGGAAGGAGCAGTGGCGCCAACGGCGGCGGC
TACGATGATGGAGATGCGTGGGCCGACCGCGGCCCGCCACGAGATGTCTA
CAGAGGCGACAGGCACGGCGGCGCGGATGGCGGCGCGGAGGGCGGCGCTG
TCGCCGGCGGCTCCTTTCACGGAAGCAACAGTGGCGGTGTCTCGAGCGGC
TCCTTCTACAGAGGCGACGGCTCCAGAGCGCAAGCCACGGCAAGACCAGC
CGCATCAGCAGCGCCGGAATTTTCCGGCCAACGAAGTCCAGGGACGCAGA
ATGCTTGGGGTTGGAGTTCCAACGCATCGGCAGCAGCAGGGTGCGGGCCG
GCTGCAGGGTTCTCGGCAACTAGGGGCAGCAGGTTCTCGGCAACACCGGC
GTCGTCGGCGCCGCCGTCTTACGGCAACGGCGGGGCAGAAGTGAAGGAAA
AAGATCCCTTTCTCGGAGGCAGCAGCGGCGGCGCAATGATGGGGCTTGGC
GCCATCGGAAGCCACCACCACCAC
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