mRNA_P-wetherbeei_contig7157.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7157.1.1
Unique NamemRNA_P-wetherbeei_contig7157.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI00140F5013 (uncharacterized protein LOC117015086 n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=UPI00140F5013)

HSP 1 Score: 331 bits (849), Expect = 5.050e-108
Identity = 188/244 (77.05%), Postives = 203/244 (83.20%), Query Frame = 1
Query:    1 LAAEAVQGAALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            LA+EAVQGAAL+LEG   VH G+RLA GVL VGD V D VL+E L+  A LLV+EA DAL ++   EAPD GLGD LDV+P+HF   RN  G +              MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  148 LASEAVQGAALSLEGVHHVHGGDRLALGVLRVGDGVPDHVLQEHLQHTAGLLVNEARDALDSSTPSEAPDRGLGDPLDVVPQHFTHSRNKTGDI--------------MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 377          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: A0A6L5CPT4_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CPT4_9INSE)

HSP 1 Score: 323 bits (827), Expect = 6.640e-103
Identity = 184/238 (77.31%), Postives = 195/238 (81.93%), Query Frame = 1
Query:   19 QGAALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            QGA LAL+  DDVH G+ LA GVL +GD VAD VLEE LED A LLVDEA D LH+  A +  D GLGD LDVI K+ A      G  +   L        TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  278 QGATLALQSVDDVHGGDGLALGVLGIGDGVADHVLEEHLEDTAGLLVDEARDTLHSTTASQTADGGLGDTLDVIAKNLAMT---LGASLAESLSSFAATGHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 512          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI001AEF6E3D (uncharacterized protein LOC121142140 n=3 Tax=Rodentia TaxID=9989 RepID=UPI001AEF6E3D)

HSP 1 Score: 309 bits (791), Expect = 1.550e-99
Identity = 180/238 (75.63%), Postives = 193/238 (81.09%), Query Frame = 1
Query:   19 QGAALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            +GAALALE  D VH G+ LA  VL VGD VAD VL+E L+  A LLVDEA DAL    + +A D GLGDALDV+ ++                  Q H  KTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  135 RGAALALERVDYVHGGDGLALSVLGVGDGVADHVLQEHLQHTAGLLVDEARDALDTTTSSQAADGGLGDALDVVAQNLTAPGR------------QSH--KTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 358          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: A0A8B7TME9_CASCN (uncharacterized protein LOC109676951 n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A8B7TME9_CASCN)

HSP 1 Score: 311 bits (796), Expect = 1.650e-99
Identity = 182/244 (74.59%), Postives = 197/244 (80.74%), Query Frame = 1
Query:    1 LAAEAVQGAALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            LA+EAVQGAALALE  D VH G+RLA GVL VGD V DDVL+E L+ AA L V+EA DAL + A  E PD GL   + V P            L+        ++ + MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  182 LASEAVQGAALALERVDHVHGGDRLALGVLGVGDSVPDDVLQEHLQHAAGLFVNEAGDALDSPAPSETPDSGLD--MTVQPDDSVWHGAGGSPLI--------YKRENMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 415          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI001447504E (uncharacterized protein LOC117249587 n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001447504E)

HSP 1 Score: 305 bits (780), Expect = 1.250e-98
Identity = 171/226 (75.66%), Postives = 183/226 (80.97%), Query Frame = 1
Query:   55 VHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            +H G+RL  GVL VGD V DDVL+EDLE  A LLVDE  D LH AAA +  D G GD+LDVI ++F                       TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQE++EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  103 IHGGDRLPLGVLGVGDGVTDDVLQEDLEHPAGLLVDETGDTLHTAAASQTADGGFGDSLDVITENF-----------------------TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESSEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 305          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI0014867E3D (uncharacterized protein LOC117707392 n=2 Tax=Muroidea TaxID=337687 RepID=UPI0014867E3D)

HSP 1 Score: 305 bits (782), Expect = 7.090e-98
Identity = 177/244 (72.54%), Postives = 193/244 (79.10%), Query Frame = 1
Query:    1 LAAEAVQGAALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            LA+EAV+GAALALE    +H  + LA GVLSV D VAD VL+E L+    LL+DEA D L      +A D  LGDALDV+P+  +   +                 K MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  151 LASEAVEGAALALESVHHIHGSDGLALGVLSVRDCVADHVLQEHLQHTTGLLIDEAGDTLDTTTPSQAADGRLGDALDVVPQDLSASASQ--------------NCKGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 380          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI0009A3486E (LOW QUALITY PROTEIN: uncharacterized protein LOC109910441 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3486E)

HSP 1 Score: 303 bits (776), Expect = 6.050e-97
Identity = 173/243 (71.19%), Postives = 192/243 (79.01%), Query Frame = 1
Query:    4 AAEAVQGAALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            AAE+++ AALA +    +H  +RLA GVLSVGDR+   +L+E+L+ A  LL+D+A DAL  A A +APD  L DALDVI +HFA                       MARTKQTA KSTGGKAPRKQLA KAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL REIAQDFK+DLRFQGSAV+ALQE +EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  163 AAESIESAALAFQSVHHIHGSDRLALGVLSVGDRIPYHILQENLQHATSLLIDQARDALDPATASQAPDGWLRDALDVITEHFA-----------------------MARTKQTAHKSTGGKAPRKQLANKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLGREIAQDFKTDLRFQGSAVMALQETSEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 382          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI0013C41DCA (uncharacterized protein LOC115519791 n=1 Tax=Lynx canadensis TaxID=61383 RepID=UPI0013C41DCA)

HSP 1 Score: 302 bits (774), Expect = 3.010e-94
Identity = 171/234 (73.08%), Postives = 189/234 (80.77%), Query Frame = 1
Query:   55 VHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLPIQPHRNKT--------MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            VH  +RLA  VLSVGD + ++V +E+L+ A  LLVDEA D L ++  G+AP+C LGDALDV+P++FA             L    H  K         MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  339 VHSRDRLALSVLSVGDCIPNNVFQENLQHAPGLLVDEAGDPLDSSTPGKAPNCRLGDALDVVPQNFAVALGTPLAQAFATLSSPRHSEKQAGDTTFGIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 572          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI001EE9C0E7 (uncharacterized protein LOC124370291 n=3 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EE9C0E7)

HSP 1 Score: 299 bits (766), Expect = 2.340e-93
Identity = 181/273 (66.30%), Postives = 198/273 (72.53%), Query Frame = 1
Query:   19 QGAALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKH---------------FATRRNDFGTLVLLPLPIQP--------------------HRNKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            Q AALA E   DVH G+RL  GVL V D V D VL++ LE +A LLVDEA D L  AAA +  DCGLGDALDV+ +H               FA+  +    + L+   I+                      +   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  274 QCAALAFERVHDVHGGDRLPLGVLGVCDGVTDHVLQKHLEHSAGLLVDEARDTLDTAAASQTTDCGLGDALDVVTEHLPVTLGASLSQPLTTFASTGHVAVAVALVKQMIKSPVLGSFVNSGCSGKNISHLARQADAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 546          
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Match: UPI001AAD7B44 (uncharacterized protein LOC120898323 n=9 Tax=Diptera TaxID=7147 RepID=UPI001AAD7B44)

HSP 1 Score: 297 bits (761), Expect = 4.860e-93
Identity = 171/257 (66.54%), Postives = 192/257 (74.71%), Query Frame = 1
Query:   25 AALALEGEDDVHRGNRLAAGVLSVGDRVADDVLEEDLEDAARLLVDEAADALHAAAAGEAPDCGLGDALDVIPKHFATRRNDFGTLVLLPLP-----------------IQPHRN----KTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 732
            AAL L+    +H G+ L  GV SV DR+ + +L++  +DA   LVDEA D  H++A  +  D GLG+ALDVIP+HF+       T     L                  ++  RN      MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  254 AALTLQSIHHIHSGDGLTLGVFSVSDRITNHILQKYFQDATGFLVDEAGDTFHSSAPSQTADGGLGNALDVIPQHFSVTLGSSFTQTFSSLSSSGDDEHRIMRENKGCSLRAQRNLRSRSEMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 510          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7157.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00140F50135.050e-10877.05uncharacterized protein LOC117015086 n=1 Tax=Rhino... [more]
A0A6L5CPT4_9INSE6.640e-10377.31Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
UPI001AEF6E3D1.550e-9975.63uncharacterized protein LOC121142140 n=3 Tax=Roden... [more]
A0A8B7TME9_CASCN1.650e-9974.59uncharacterized protein LOC109676951 n=1 Tax=Casto... [more]
UPI001447504E1.250e-9875.66uncharacterized protein LOC117249587 n=1 Tax=Epine... [more]
UPI0014867E3D7.090e-9872.54uncharacterized protein LOC117707392 n=2 Tax=Muroi... [more]
UPI0009A3486E6.050e-9771.19LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
UPI0013C41DCA3.010e-9473.08uncharacterized protein LOC115519791 n=1 Tax=Lynx ... [more]
UPI001EE9C0E72.340e-9366.30uncharacterized protein LOC124370291 n=3 Tax=Homal... [more]
UPI001AAD7B444.860e-9366.54uncharacterized protein LOC120898323 n=9 Tax=Dipte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7157contigP-wetherbeei_contig7157:1049..2614 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWI7
PFAMsHistone
Model size1189
Max annot lvl2759|Eukaryota
KEGG koko:K11253
KEGG Pathwayko05034,ko05202,ko05322,map05034,map05202,map05322
Hectar predicted targeting categoryother localisation
GOsGO:0000785,GO:0000786,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0032991,GO:0032993,GO:0034622,GO:0034728,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0044815,GO:0044877,GO:0051276,GO:0065003,GO:0065004,GO:0071103,GO:0071824,GO:0071840,GO:0097159,GO:1901363
Exons2
Evalue1.71e-84
EggNOG OGsCOG2036@1|root,KOG1745@2759|Eukaryota
Ec32 ortholog descriptionHistone H3
Ec32 orthologEc-26_006380.1
Descriptionprotein heterodimerization activity
Cds size411
COG categoryB
BRITEko00000,ko00001,ko03036,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186962.199126-UTR-P-wetherbeei_contig7157:1048..15021683186962.199126-UTR-P-wetherbeei_contig7157:1048..1502Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7157 1049..1502 -
1683186962.220055-UTR-P-wetherbeei_contig7157:1913..19821683186962.220055-UTR-P-wetherbeei_contig7157:1913..1982Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7157 1914..1982 -
1683186962.229555-UTR-P-wetherbeei_contig7157:2359..26141683186962.229555-UTR-P-wetherbeei_contig7157:2359..2614Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7157 2360..2614 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186962.2106543-CDS-P-wetherbeei_contig7157:1502..19131683186962.2106543-CDS-P-wetherbeei_contig7157:1502..1913Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7157 1503..1913 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7157.1.1prot_P-wetherbeei_contig7157.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7157 1503..1913 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7157.1.1

>prot_P-wetherbeei_contig7157.1.1 ID=prot_P-wetherbeei_contig7157.1.1|Name=mRNA_P-wetherbeei_contig7157.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS*
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mRNA from alignment at P-wetherbeei_contig7157:1049..2614-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7157.1.1 ID=mRNA_P-wetherbeei_contig7157.1.1|Name=mRNA_P-wetherbeei_contig7157.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1566bp|location=Sequence derived from alignment at P-wetherbeei_contig7157:1049..2614- (Phaeothamnion wetherbeei SAG_119_79)
TTAGCCGCCGAAGCCGTACAGGGTGCGGCCCTGGCGCTTGAGGGCGAAGA CGACGTCCATCGAGGTAACCGTCTTGCGGCGGGCGTGCTCAGTGTAGGTG ACCGAGTCGCGGATGACGTTCTCGAGGAAGACCTTGAGGACGCCGCGCGT CTCCTCGTAGATGAGGCCGCTGATGCGCTTCACGCCGCCGCGGCGGGCGA GGCGCCGGATTGCGGGCTTGGTGATGCCCTGGATGTTATCCCGAAGCACT TTGCGGTGACGCTTCGCACCGCCCTTGCCGAGCCCCTTGCCTCCCTTGCC GCGTCCAGACATTGCTTGGTTTTGGTGTTTCTCGTGAGAAGTGTTTGTAA GCGGATGGGATTGAAGACAAGAGAGTACCAAGTTCTTCTGACAGCATCTG ATTGGCCGATGAATCTCGCTTTTGGCCAAAAAATGGTTCGCCCTCACCGT CTGTATTGCCAGATATTCTGGAGGGAACAAGGTCAGATATAACGATGATT GCGGCCGTTCAGCAGGTTAAAACGTGCTATCCTACCGCTTTCTTGCCATG AAATTTATGATGGAATATCCTCTAACGTGGGCGGCGAGAGCGAACCGTCT TTCATCAAAAAGTGAGGAAATCGGCCAATCAGACGAGGCGGAATGATTTC GGTACTCTGGTGCTTCTCCCTCTTCCCATCCAACCTCACCGAAACAAAAC CATGGCCCGCACGAAGCAGACCGCCCGCAAGTCGACGGGGGGCAAGGCGC CCCGGAAGCAGCTCGCCACCAAGGCCGCCCGCAAGTCGGCGCCCGCAACG GGCGGCGTAAAGAAGCCCCATCGCTACCGCCCGGGCACCGTGGCCCTCCG CGAGATCCGGCGCTACCAGAAGTCGACAGAGCTGCTCATCCGCAAGCTGC CGTTCCAGCGCCTCGTCCGCGAGATCGCCCAGGACTTCAAGAGCGACCTG CGCTTCCAGGGCTCTGCTGTGCTCGCGCTGCAGGAGGCGGCTGAGGCGTA CCTGGTCGGCCTGTTTGAGGACACCAACCTGTGCGCCATCCACGCCAAGC GCGTCACCATCATGCCCAAGGACATCCAACTCGCCCGCCGCATCCGCGGC GAGCGCTCGTAGAGGACGGAGAAAGTAGCAAGAGAAGAGTCATTCTTCAA ACTTTCCCTGGTGTCTTTTGACACCACCCATTTTGACGATGAAAAAAGTT TTTTGGGACGGGAAAGGACATATGTGCCATTCGAAAGAACTGGCGAGATG AGTGAGGACGTTGTGAAAGCAATTTCGCGCTGCTTTTGATCACGTTAGGT GCTTTTTTTGTCCGTCGGGTATAAGAGCTCGTTGGGTTTTTTATTTCCTT TTGAGATGCTTTTGCTGGTCTGGTCTTGCTTCCTTTTTGCATCAATTTTG GTTTCCATGCAGCAAGGCGACCGCGCTGTGCAAGAATAACGGCGAAGCGG ATGCTTCTTGTTCGTATGCTTTCATTTGGGTAAGTGGGGAAATGGTGAAG AAGGCATCCATATGATGGGATGGCGGCGCCGGCGGCAACCCCAGCGAAAA TTAATACACTGTGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7157:1049..2614-

>mRNA_P-wetherbeei_contig7157.1.1 ID=mRNA_P-wetherbeei_contig7157.1.1|Name=mRNA_P-wetherbeei_contig7157.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig7157:1049..2614- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCCGCACGAAGCAGACCGCCCGCAAGTCGACGGGGGGCAAGGCGCC
CCGGAAGCAGCTCGCCACCAAGGCCGCCCGCAAGTCGGCGCCCGCAACGG
GCGGCGTAAAGAAGCCCCATCGCTACCGCCCGGGCACCGTGGCCCTCCGC
GAGATCCGGCGCTACCAGAAGTCGACAGAGCTGCTCATCCGCAAGCTGCC
GTTCCAGCGCCTCGTCCGCGAGATCGCCCAGGACTTCAAGAGCGACCTGC
GCTTCCAGGGCTCTGCTGTGCTCGCGCTGCAGGAGGCGGCTGAGGCGTAC
CTGGTCGGCCTGTTTGAGGACACCAACCTGTGCGCCATCCACGCCAAGCG
CGTCACCATCATGCCCAAGGACATCCAACTCGCCCGCCGCATCCGCGGCG
AGCGCTCGTAG
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