mRNA_P-wetherbeei_contig7153.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7153.1.1
Unique NamemRNA_P-wetherbeei_contig7153.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7153.1.1 vs. uniprot
Match: A0A482URQ5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482URQ5_9ARCH)

HSP 1 Score: 65.1 bits (157), Expect = 3.150e-10
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 1 
Query:  382 GVQLLMSEAFYQFLSPAAKLWCRQVDRVRKRGHMEPMGLYTFD 510
            GV LLMSE FYQ LSP+A  +CRQVDR+R+    EPMGLYT+D
Sbjct:   27 GVSLLMSEPFYQLLSPSAAKYCRQVDRIRRSALEEPMGLYTYD 69
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BLAST of mRNA_P-wetherbeei_contig7153.1.1 vs. uniprot
Match: A0A7S1DNZ2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DNZ2_HEMAN)

HSP 1 Score: 61.2 bits (147), Expect = 2.060e-7
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 1 
Query:  385 VQLLMSEAFYQFLSPAAKLWCRQVDRVRKRGHMEPMGLYTFD---CHPDQITSLPGDD 549
            V +LMSE FY  LSP  K  CR++DRV  +G ++PM LYT+D   CH + +  L  DD
Sbjct:  412 VDILMSETFYNMLSPEVKHLCRRIDRVTVKGSVQPMSLYTYDVPPCHANTLVELTVDD 469
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7153.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A482URQ5_9ARCH3.150e-1067.44Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1DNZ2_HEMAN2.060e-748.28Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7153contigP-wetherbeei_contig7153:1242..2171 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog29176.XP_003881111.1
PFAMsGuanylate_cyc
Model size648
Max annot lvl5794|Apicomplexa
Hectar predicted targeting categorysignal peptide
Exons2
Evalue1.55e-06
EggNOG OGs28IMH@1|root,2QQYF@2759|Eukaryota,3YA0E@5794|Apicomplexa,3YKQ4@5796|Coccidia,3YRJJ@5809|Sarcocystidae
DescriptionAdenylate and guanylate cyclase catalytic domain-containing protein
Cds size366
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186961.9734313-UTR-P-wetherbeei_contig7153:1241..15231683186961.9734313-UTR-P-wetherbeei_contig7153:1241..1523Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7153 1242..1523 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186961.9840662-CDS-P-wetherbeei_contig7153:1523..17661683186961.9840662-CDS-P-wetherbeei_contig7153:1523..1766Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7153 1524..1766 +
1683186961.9939773-CDS-P-wetherbeei_contig7153:2048..21711683186961.9939773-CDS-P-wetherbeei_contig7153:2048..2171Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7153 2049..2171 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7153.1.1prot_P-wetherbeei_contig7153.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7153 1524..2171 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7153.1.1

>prot_P-wetherbeei_contig7153.1.1 ID=prot_P-wetherbeei_contig7153.1.1|Name=mRNA_P-wetherbeei_contig7153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp
MLRSPIATAAAIFPIATALLAPRDRGTNRNPRTGVQLLMSEAFYQFLSPA
AKLWCRQVDRVRKRGHMEPMGLYTFDCHPDQITSLPGDDEDTTAAVAGGG
GGGGGGGAVLRSHDMTSAVAAA
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mRNA from alignment at P-wetherbeei_contig7153:1242..2171+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7153.1.1 ID=mRNA_P-wetherbeei_contig7153.1.1|Name=mRNA_P-wetherbeei_contig7153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig7153:1242..2171+ (Phaeothamnion wetherbeei SAG_119_79)
CCGTTTCAGGCATCCTCATTCAGTCTTCGCTTGGTTCGATCGACGGCAGT
TGCCTCGGTCGTCCACCGTTCCGTGTTGTTCAACCATGTAGTCATCCAGT
CACTCGACCATTCGGTGCCAGTTTGTTAGGCCAACTCAGTTTGTTCGGCT
GCGGGGAAGGTGGCGGCGCTGTTGGGTCAGCTACCCCTTGCCAAGCCAAA
ACGACAGCCAGTGTTTGTTCTCTCCCATAACGCGGCTAATATTATCGCCA
CTCCTGGCGCCGCGAGCGCCACTCTTTTAGCGATGCTGCGGTCTCCCATT
GCCACCGCCGCTGCAATCTTCCCTATCGCGACCGCTCTGCTGGCCCCACG
GGACCGTGGAACGAATCGCAACCCCCGAACAGGCGTGCAGCTGCTGATGT
CGGAGGCCTTTTACCAGTTTTTGTCTCCGGCGGCCAAACTTTGGTGCCGC
CAGGTGGACCGTGTGCGCAAACGCGGCCACATGGAGCCCATGGGACTCTA
TACCTTCGATTGCCACCCGGACCAGGTGAGAGGCAGTATTAGTTGGAAAG
TAAGCGCGAGGGATCTAGTGAGAGGAGATTTGATCCGGCCTAAGTCGCAA
CAGCCAAAAGAGCAGACTGCGTCGGAATGGCCGGACGAATCTCTGCGCAG
CAATTCTGCTGTCGAACGGATCTCCCCAACACCTCCCTCACTGTACCAAA
CCATCTGCCCTCTCAAGAGGAAGCAACAAAGTGTATAAAAGGTATTCCAG
TGTTTACCACTCAATCGCCTACGGCAATTCTTTACTTCGCTCGTGTCTCG
TTCACAGATTACGTCGCTGCCCGGCGATGATGAGGACACCACCGCTGCGG
TGGCTGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGCCGTCCTCCGGTCG
CACGACATGACATCGGCGGTGGCAGCGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7153:1242..2171+

>mRNA_P-wetherbeei_contig7153.1.1 ID=mRNA_P-wetherbeei_contig7153.1.1|Name=mRNA_P-wetherbeei_contig7153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig7153:1242..2171+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCGGTCTCCCATTGCCACCGCCGCTGCAATCTTCCCTATCGCGAC
CGCTCTGCTGGCCCCACGGGACCGTGGAACGAATCGCAACCCCCGAACAG
GCGTGCAGCTGCTGATGTCGGAGGCCTTTTACCAGTTTTTGTCTCCGGCG
GCCAAACTTTGGTGCCGCCAGGTGGACCGTGTGCGCAAACGCGGCCACAT
GGAGCCCATGGGACTCTATACCTTCGATTGCCACCCGGACCAGATTACGT
CGCTGCCCGGCGATGATGAGGACACCACCGCTGCGGTGGCTGGCGGTGGC
GGCGGCGGCGGCGGCGGCGGCGCCGTCCTCCGGTCGCACGACATGACATC
GGCGGTGGCAGCGGCG
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