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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2566 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 1974 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186961.15376-UTR-P-wetherbeei_contig714:615..1088 | 1683186961.15376-UTR-P-wetherbeei_contig714:615..1088 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig714 616..1088 - |
| 1683186961.1834688-UTR-P-wetherbeei_contig714:3062..3181 | 1683186961.1834688-UTR-P-wetherbeei_contig714:3062..3181 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig714 3063..3181 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186961.1734083-CDS-P-wetherbeei_contig714:1088..3062 | 1683186961.1734083-CDS-P-wetherbeei_contig714:1088..3062 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig714 1089..3062 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig714.1.1 >prot_P-wetherbeei_contig714.1.1 ID=prot_P-wetherbeei_contig714.1.1|Name=mRNA_P-wetherbeei_contig714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=658bp
MLSPSFSWRVKSTSLLPLPPAPRRYDSWLVCYVSRLFLSTHTAISAAVGA
GAAAPVSHSGFASPCNHSKPPNFSTLPYTPSPCASSAAKPVRTCMQKKEG
EPQKASDDIGVASGGEPGHGHDSGNISFTDAAAYRRAFGVKGGNSRPSRG
GKTPGGGGGDGAALDDIGMVGGRGRGGIRSSGVGSSASAAAVAAAVVAAA
SLASTGLQGGSGGGAGSRESAGCRGVENDCAGNNAANSAVAEDSSGGGAN
GGRDGGVPGSGADACATTNGVATTVANTLKSPVEGLASKESVPEGDGAAG
AVEASAAALSLVAAAAAVAATMLAPVASPSRAASTTTAAPSASPDGVASP
AGNGTRTYIDRNGKRQAVVERNLSRTESAAAAGAAAAPAPVPVPVPAPRT
SRPDVVRLTGETSAAATGGSVSGGGGGASSSASGAAPPRRNFRANLNIAI
AHGAALDAADAPRMGAAAAAPVLTHTEPSSPVGIRNAARRAPSRAISASN
AALEGGGAGNTATAAISSTPPDAGSQTPAKPLASPSGTRRPSLHDAVALR
MSRGSGTNRPSAVDVVGVKPAGRSAALSRLNSAASIGGGSGGVASPSSPT
SAGGGGGALTHEPVRSPASPSGSLGASGRGPRRRRDRGSPSSPVEAEGFG
GGGAAAG* back to topmRNA from alignment at P-wetherbeei_contig714:616..3181- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig714.1.1 ID=mRNA_P-wetherbeei_contig714.1.1|Name=mRNA_P-wetherbeei_contig714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2566bp|location=Sequence derived from alignment at P-wetherbeei_contig714:616..3181- (Phaeothamnion wetherbeei SAG_119_79)
GACCATCGCATGGCAGGCAGGAGTTTGTCCATCTTATTCAATCTGCCGAC
ATGCAGTTGGACGCGTGCATTGGCTTACGATGGTTAATGTGTGTCATGAA
AGACTAAGTTATCTCTATAATGCTGAGTCCGAGCTTTTCTTGGCGTGTAA
AGTCTACGTCTCTTCTGCCGCTCCCTCCTGCCCCTCGACGTTATGATTCA
TGGCTTGTTTGTTACGTGTCAAGACTTTTCCTATCAACACACACAGCCAT
TAGTGCTGCCGTCGGCGCTGGCGCCGCTGCGCCAGTGTCTCACTCGGGCT
TCGCATCGCCTTGCAACCATTCAAAACCTCCAAATTTCTCAACCCTCCCA
TACACACCTTCCCCGTGTGCCTCCTCCGCCGCAAAACCCGTCCGTACATG
CATGCAGAAGAAGGAGGGCGAGCCGCAAAAGGCGAGCGACGACATCGGCG
TCGCCTCGGGCGGCGAGCCCGGGCACGGCCACGACAGCGGCAACATCAGC
TTCACCGACGCCGCCGCCTACCGCCGCGCCTTCGGTGTCAAAGGCGGAAA
CAGCCGCCCGAGCCGCGGCGGCAAGACGCCCGGCGGCGGCGGAGGCGATG
GTGCCGCGCTGGACGACATCGGAATGGTCGGCGGCCGCGGCCGCGGCGGC
ATCCGGTCCAGTGGCGTCGGCAGCAGCGCATCAGCCGCGGCGGTAGCGGC
CGCGGTGGTGGCAGCGGCTTCACTGGCGTCGACCGGATTGCAAGGCGGCA
GCGGCGGCGGCGCTGGAAGCAGAGAAAGCGCTGGCTGCCGAGGCGTTGAA
AATGATTGTGCAGGTAACAATGCAGCCAACAGCGCTGTCGCAGAGGATAG
TAGCGGCGGCGGTGCTAACGGCGGCCGTGATGGTGGTGTCCCTGGCAGCG
GCGCCGACGCTTGTGCGACCACGAACGGAGTCGCTACCACTGTAGCGAAT
ACGCTAAAATCGCCGGTGGAAGGGCTGGCATCAAAGGAAAGTGTGCCAGA
AGGCGACGGCGCGGCAGGAGCGGTGGAGGCCTCGGCAGCTGCGCTCTCGT
TGGTGGCGGCGGCGGCGGCGGTGGCGGCAACGATGCTGGCGCCGGTGGCG
TCACCTTCTAGAGCAGCCTCGACAACGACGGCGGCACCGTCAGCGTCGCC
TGACGGAGTGGCGTCTCCGGCCGGCAACGGCACGCGAACTTACATTGACC
GGAACGGGAAACGGCAGGCGGTGGTAGAGCGAAACCTTTCGCGCACCGAA
TCGGCGGCCGCGGCTGGTGCCGCTGCTGCACCGGCACCGGTGCCGGTGCC
AGTACCGGCGCCGCGGACTTCAAGGCCAGATGTGGTCCGACTGACAGGGG
AGACTTCAGCTGCAGCCACAGGAGGCAGCGTAAGCGGCGGCGGCGGTGGC
GCCTCATCTTCGGCTTCTGGTGCAGCCCCGCCGCGGCGGAACTTCCGGGC
GAACCTTAACATTGCGATTGCGCACGGCGCCGCTCTTGACGCCGCAGACG
CGCCAAGGATGGGAGCGGCGGCTGCGGCGCCCGTGCTGACCCACACGGAG
CCTTCATCACCGGTGGGGATCAGGAACGCCGCGAGGCGGGCACCGAGTAG
AGCCATCTCCGCCTCAAACGCCGCACTCGAAGGTGGAGGCGCTGGGAATA
CGGCAACGGCAGCGATATCGTCGACGCCGCCCGATGCCGGGTCTCAAACC
CCCGCAAAGCCGTTGGCTTCGCCGTCGGGCACAAGGAGGCCGAGCCTCCA
CGACGCTGTCGCGCTGCGCATGTCCCGCGGAAGCGGCACCAACCGGCCGT
CGGCAGTCGATGTCGTGGGGGTCAAACCCGCTGGGCGCTCCGCCGCCCTC
AGTCGCCTCAACTCCGCCGCGAGCATCGGCGGCGGCAGCGGCGGCGTTGC
GTCGCCATCTTCGCCAACGTCGGCAGGGGGAGGAGGCGGCGCCTTAACCC
ACGAGCCAGTACGGTCGCCGGCGTCGCCCAGCGGGTCGCTCGGAGCCAGC
GGCCGTGGCCCACGGAGGCGGCGGGACCGGGGCAGTCCAAGCTCACCAGT
GGAGGCGGAGGGCTTTGGCGGCGGCGGCGCCGCCGCCGGCTGATACCGGC
ACGATGACGCTGAAGTGGACAGCGAAAAGCGCTTGCGTTTACACAATGTC
GTCAGGAAAGCAGCGAGCCTTTGAGCCTAGCGGGAACAGCGGGCATCTCA
TGGAATAAGTGAGCCAGAGCACCACTCTGTTGGCCGCTGTTCGCCGCCGG
GTTTCAGGGCGAAGGGGAGGGAGGAGAGAGGGCCGTCTCGACGGTGATGA
TGGGCAGGCGCGCCTCTTTCATCGGCCGTGGCGGCGGCTCTGGGCGTCCC
TCACGGGTGTAAGCTCCCTGCCCGGCCGGGAAGAGAAGAGAAGAAGAAAA
GACCAGATTGGCCTCCGCCAAGCGAAATAAGAGGGGCCGCAGACGGCGGA
AGGAGCACTTGGCGGTAGCGCAAAAAGAGAGGACAGCTCTTATTGCATTG
ATGACAACACCCCTCAGGATTTAGCAAACTCAGTAGACAAAAATAACCTT
TTACTCCGATATTCGC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig714:616..3181- >mRNA_P-wetherbeei_contig714.1.1 ID=mRNA_P-wetherbeei_contig714.1.1|Name=mRNA_P-wetherbeei_contig714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1974bp|location=Sequence derived from alignment at P-wetherbeei_contig714:616..3181- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAGTCCGAGCTTTTCTTGGCGTGTAAAGTCTACGTCTCTTCTGCC
GCTCCCTCCTGCCCCTCGACGTTATGATTCATGGCTTGTTTGTTACGTGT
CAAGACTTTTCCTATCAACACACACAGCCATTAGTGCTGCCGTCGGCGCT
GGCGCCGCTGCGCCAGTGTCTCACTCGGGCTTCGCATCGCCTTGCAACCA
TTCAAAACCTCCAAATTTCTCAACCCTCCCATACACACCTTCCCCGTGTG
CCTCCTCCGCCGCAAAACCCGTCCGTACATGCATGCAGAAGAAGGAGGGC
GAGCCGCAAAAGGCGAGCGACGACATCGGCGTCGCCTCGGGCGGCGAGCC
CGGGCACGGCCACGACAGCGGCAACATCAGCTTCACCGACGCCGCCGCCT
ACCGCCGCGCCTTCGGTGTCAAAGGCGGAAACAGCCGCCCGAGCCGCGGC
GGCAAGACGCCCGGCGGCGGCGGAGGCGATGGTGCCGCGCTGGACGACAT
CGGAATGGTCGGCGGCCGCGGCCGCGGCGGCATCCGGTCCAGTGGCGTCG
GCAGCAGCGCATCAGCCGCGGCGGTAGCGGCCGCGGTGGTGGCAGCGGCT
TCACTGGCGTCGACCGGATTGCAAGGCGGCAGCGGCGGCGGCGCTGGAAG
CAGAGAAAGCGCTGGCTGCCGAGGCGTTGAAAATGATTGTGCAGGTAACA
ATGCAGCCAACAGCGCTGTCGCAGAGGATAGTAGCGGCGGCGGTGCTAAC
GGCGGCCGTGATGGTGGTGTCCCTGGCAGCGGCGCCGACGCTTGTGCGAC
CACGAACGGAGTCGCTACCACTGTAGCGAATACGCTAAAATCGCCGGTGG
AAGGGCTGGCATCAAAGGAAAGTGTGCCAGAAGGCGACGGCGCGGCAGGA
GCGGTGGAGGCCTCGGCAGCTGCGCTCTCGTTGGTGGCGGCGGCGGCGGC
GGTGGCGGCAACGATGCTGGCGCCGGTGGCGTCACCTTCTAGAGCAGCCT
CGACAACGACGGCGGCACCGTCAGCGTCGCCTGACGGAGTGGCGTCTCCG
GCCGGCAACGGCACGCGAACTTACATTGACCGGAACGGGAAACGGCAGGC
GGTGGTAGAGCGAAACCTTTCGCGCACCGAATCGGCGGCCGCGGCTGGTG
CCGCTGCTGCACCGGCACCGGTGCCGGTGCCAGTACCGGCGCCGCGGACT
TCAAGGCCAGATGTGGTCCGACTGACAGGGGAGACTTCAGCTGCAGCCAC
AGGAGGCAGCGTAAGCGGCGGCGGCGGTGGCGCCTCATCTTCGGCTTCTG
GTGCAGCCCCGCCGCGGCGGAACTTCCGGGCGAACCTTAACATTGCGATT
GCGCACGGCGCCGCTCTTGACGCCGCAGACGCGCCAAGGATGGGAGCGGC
GGCTGCGGCGCCCGTGCTGACCCACACGGAGCCTTCATCACCGGTGGGGA
TCAGGAACGCCGCGAGGCGGGCACCGAGTAGAGCCATCTCCGCCTCAAAC
GCCGCACTCGAAGGTGGAGGCGCTGGGAATACGGCAACGGCAGCGATATC
GTCGACGCCGCCCGATGCCGGGTCTCAAACCCCCGCAAAGCCGTTGGCTT
CGCCGTCGGGCACAAGGAGGCCGAGCCTCCACGACGCTGTCGCGCTGCGC
ATGTCCCGCGGAAGCGGCACCAACCGGCCGTCGGCAGTCGATGTCGTGGG
GGTCAAACCCGCTGGGCGCTCCGCCGCCCTCAGTCGCCTCAACTCCGCCG
CGAGCATCGGCGGCGGCAGCGGCGGCGTTGCGTCGCCATCTTCGCCAACG
TCGGCAGGGGGAGGAGGCGGCGCCTTAACCCACGAGCCAGTACGGTCGCC
GGCGTCGCCCAGCGGGTCGCTCGGAGCCAGCGGCCGTGGCCCACGGAGGC
GGCGGGACCGGGGCAGTCCAAGCTCACCAGTGGAGGCGGAGGGCTTTGGC
GGCGGCGGCGCCGCCGCCGGCTGA back to top
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