mRNA_P-wetherbeei_contig7139.2.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7139.2.4
Unique NamemRNA_P-wetherbeei_contig7139.2.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: A0A225UIR3_9STRA (MiaB-like tRNA modifying enzyme (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UIR3_9STRA)

HSP 1 Score: 356 bits (914), Expect = 1.420e-118
Identity = 180/277 (64.98%), Postives = 217/277 (78.34%), Query Frame = 1
Query:   34 IPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            +PGTQ +WLKT+GC HNVSDSE M G+LA  GYR  +D  +A +W++NSCTVKDPSQ+AF++LA   R + K +VVAGCVPQADR LK LE +SIVG+QQ+DRVVE VE+TL   K +T  L S       K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P A+  R      EG  EIWLSSEDTGAYG+D+G+ +  LLR+++EVVPEGVMLR+GMTNPPYIL  L A+A ALNH RV++FLHVPVQSGSD VL AM
Sbjct:   57 VPGTQLIWLKTYGCSHNVSDSEYMQGVLASYGYRFTQDPDAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEDVSIVGIQQVDRVVEVVEETL---KGHTVRLLS-------KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVINEGVTEIWLSSEDTGAYGIDIGTDLPTLLRKLLEVVPEGVMLRVGMTNPPYILDHLDAVAEALNHDRVYAFLHVPVQSGSDDVLLAM 323          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: A0A8K1CM86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM86_PYTOL)

HSP 1 Score: 360 bits (924), Expect = 6.150e-118
Identity = 182/286 (63.64%), Postives = 218/286 (76.22%), Query Frame = 1
Query:    7 AVEDAPQGHIPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNL---ARAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            A+ D     +PGTQK+WLKT+GC HNVSDSE M G+LA  GYR  E A  A +W++NSCTVKDPSQ+AF++L   A+ EGK +VVAGCVPQADR LK LEG+S+VG+QQ+DRVVE VE+TL   K +T  L S       K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P  +  R      EG  EIWLSSEDTGAYG+D+G+ +  LLR++++VVP GVMLR+GMTNPPYIL  L AIA  LNH  V+SFLHVPVQSGSD VL AM
Sbjct:   46 AMGDGGAAQVPGTQKIWLKTYGCSHNVSDSEYMQGVLASYGYRFTEKAEDAQLWLLNSCTVKDPSQAAFMHLVLKAKTEGKAVVVAGCVPQADRHLKGLEGVSMVGIQQVDRVVEVVEETL---KGHTVRLLS-------KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEVIVSRAQKVIEEGVTEIWLSSEDTGAYGIDIGTDLPTLLRKLIQVVPNGVMLRVGMTNPPYILEHLDAIAEILNHDSVYSFLHVPVQSGSDDVLLAM 321          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: A0A7S1GBY6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBY6_9STRA)

HSP 1 Score: 357 bits (915), Expect = 6.420e-116
Identity = 182/278 (65.47%), Postives = 216/278 (77.70%), Query Frame = 1
Query:   31 HIPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNL---ARAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            H+PGTQ+VW+KT+GC HNVSDSE MAG LA  GY +V+D  +AD W+VNSCTVKDPSQSAF++L   AR  G+ LVVAGCVPQADR++K LE +S+VG  QIDRVVE VE+TL+  +     LE        K+ LP+LDLPKIR++PL+EIVP+STGCLGACTYCKTRHARG LGSY P A+  RV AA AEG  E+WLSSEDTGAYG D+ + I+ LLR +V  +P  VMLRLGMTNPP+IL  L A+A  L HPRVF+FLHVPVQSGSD VL AM
Sbjct:   70 HVPGTQRVWMKTYGCAHNVSDSEYMAGQLAAYGYAIVDDREAADCWLVNSCTVKDPSQSAFMHLVAQARGSGRALVVAGCVPQADREIKGLEDVSVVGTSQIDRVVEVVEETLRGHRVRL--LE--------KKALPALDLPKIRKNPLIEIVPLSTGCLGACTYCKTRHARGALGSYRPDAIVARVKAAVAEGVTEVWLSSEDTGAYGRDIRTDIASLLRAIVVELPPHVMLRLGMTNPPFILDHLDALAELLAHPRVFAFLHVPVQSGSDRVLGAM 337          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: G4YYU5_PHYSP (Threonylcarbamoyladenosine tRNA methylthiotransferase n=8 Tax=Phytophthora TaxID=4783 RepID=G4YYU5_PHYSP)

HSP 1 Score: 353 bits (905), Expect = 1.090e-114
Identity = 178/283 (62.90%), Postives = 218/283 (77.03%), Query Frame = 1
Query:   16 DAPQGHIPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            DA +  +PG+Q +W+KT+GC HNVSDSE M G+LA  GYR  +D  +A +W++NSCTVKDPSQ+AF++L    R + K +VVAGCVPQADR LK LE +SIVG+QQ+DRVVE VE+TL   K +T  L S       K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P A+  R     +EG  EIWLSSEDTGAYG+D+G+ +  LLR+++EVVP+GVMLR+GMTNPPYIL  L AIA  L H RV+SFLHVPVQSGSD VL AM
Sbjct:   52 DAKEPSVPGSQLIWMKTYGCSHNVSDSEYMQGVLASYGYRFTQDPDAAQLWLLNSCTVKDPSQAAFMHLVVKGRKQSKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETL---KGHTVRLLS-------KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVISEGVTEIWLSSEDTGAYGIDIGTDLPTLLRKLLEVVPDGVMLRVGMTNPPYILDHLDAIAEVLKHERVYSFLHVPVQSGSDDVLLAM 324          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: A0A2D4BV89_PYTIN (MiaB-like tRNA modifying enzyme, archaeal-type n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV89_PYTIN)

HSP 1 Score: 349 bits (895), Expect = 2.630e-114
Identity = 176/277 (63.54%), Postives = 215/277 (77.62%), Query Frame = 1
Query:   34 IPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            +PGTQK+WLKT+GC HNVSDSE M G+LA  GYR  ++   A +W++NSCTVKDPSQ+AF++L    +A GK +VVAGCVPQADR +K LE +S+VG+QQ+DRVVE VE+TL   K +T  L S       K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P A+  RV     EG  EIWLSSEDTGAYG+D+G+++  LLR ++EV+P+GVMLR+GMTNPPYIL  L  IA  LNH  VF+FLHVPVQSGSD VL AM
Sbjct:   77 VPGTQKIWLKTYGCSHNVSDSEYMQGVLASYGYRFTDEPEDAQLWLLNSCTVKDPSQAAFMHLVLKGKAAGKAVVVAGCVPQADRHIKGLEDVSMVGIQQVDRVVEVVEETL---KGHTVRLLS-------KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPDAIVHRVKQVIDEGVTEIWLSSEDTGAYGIDIGTNLPTLLRAILEVLPDGVMLRVGMTNPPYILEHLDDIADILNHDAVFAFLHVPVQSGSDDVLLAM 343          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: W2PQG6_PHYPN (Threonylcarbamoyladenosine tRNA methylthiotransferase n=11 Tax=Phytophthora TaxID=4783 RepID=W2PQG6_PHYPN)

HSP 1 Score: 350 bits (899), Expect = 5.460e-114
Identity = 177/283 (62.54%), Postives = 216/283 (76.33%), Query Frame = 1
Query:   16 DAPQGHIPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            D  +  +PGTQ +W+KT+GC HNVSDSE M G LA  GYR  +D  +A +W++NSCTVKDPSQ+AF++LA   R + K +VVAGCVPQADR LK LE +SIVG+QQ+DRVVE VE+TL+          + RL A  K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P A+  R      EG  EIWLSSEDTGAYG+D+G+ +  L+R+++ VVP+GVMLR+GMTNPPYIL  L AIA  LNH RV+SFLHVPVQSGSD VL AM
Sbjct:   52 DTTEPSVPGTQLIWIKTYGCSHNVSDSEYMQGALASYGYRFTQDPDAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGH--------TVRLLA--KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVINEGVTEIWLSSEDTGAYGIDIGTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAM 324          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: A0A3F2RYP2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYP2_9STRA)

HSP 1 Score: 349 bits (895), Expect = 5.710e-114
Identity = 175/277 (63.18%), Postives = 215/277 (77.62%), Query Frame = 1
Query:   34 IPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            +PGTQ +W+KT+GC HNVSDSE M G+LA  GYR  +D  +A +W++NSCTVKDPSQ+AF++LA   R + K +VVAGCVPQADR LK LE +SIVG+QQ+DRVVE VE+TL   K +T  L S       K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P A+  R      EG  E+WLSSEDTGAYG+D+ + +  L+R+++EVVP+GVMLR+GMTNPPYIL  L A+A  LNH RV+SFLHVPVQSGSD VL AM
Sbjct:   56 VPGTQLIWIKTYGCSHNVSDSEYMQGVLASYGYRFTQDPDAAQLWLLNSCTVKDPSQAAFMHLAVKGRRQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETL---KGHTVRLLS-------KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQNVINEGVTELWLSSEDTGAYGIDINTDLPTLMRKLLEVVPDGVMLRVGMTNPPYILDHLDAVAEVLNHDRVYSFLHVPVQSGSDDVLLAM 322          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: A0A484EFP4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFP4_BRELC)

HSP 1 Score: 350 bits (898), Expect = 6.550e-114
Identity = 176/277 (63.54%), Postives = 216/277 (77.98%), Query Frame = 1
Query:   34 IPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            +PGTQ +W+KT+GC HNVSDSE M G+LA  GYR  ED  +A +W++NSCTVKDPSQ+AF++L    R + K +VVAGCVPQADR +K LE +SIVG+QQ+DRVVE VE+TL+          + RL A  K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P A+  R  A   EG  EIWLSSEDTGAYG+D+G+ +  LL ++++VVP+GVMLRLGMTNPPYIL+ L +IA  LNH RV+SFLHVPVQSGSD VL AM
Sbjct:   55 VPGTQLIWMKTYGCSHNVSDSEYMQGVLASYGYRFTEDPDTAQLWLLNSCTVKDPSQAAFMHLVVKGRKQKKAVVVAGCVPQADRYIKGLEDVSIVGIQQVDRVVEVVEETLKGH--------TVRLLA--KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVARADAVINEGVTEIWLSSEDTGAYGIDIGTDLPTLLHKLLQVVPDGVMLRLGMTNPPYILNHLNSIAQVLNHDRVYSFLHVPVQSGSDEVLLAM 321          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: M4BZB9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZB9_HYAAE)

HSP 1 Score: 349 bits (896), Expect = 2.020e-113
Identity = 179/285 (62.81%), Postives = 220/285 (77.19%), Query Frame = 1
Query:   10 VEDAPQGHIPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            V++ P   +PGTQ +W+KT+GC HNVSDSE M G+L+  GYR  +D  +A +W++NSCTVKDPSQ+AF++LA   R + K +VVAGCVPQADR+LK LE +SIVG+QQ+DRVVE VE+TL   K +T  L S       K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY   A+  R  +   EG  EIWLSSEDTGAYG+DLG+ +  LLR+++EVVP+GVMLR+GMTNPPYIL  L AIA  L H RV+SFLHVPVQSGSD VL AM
Sbjct:   50 VKEEPSS-VPGTQLIWVKTYGCSHNVSDSEYMQGVLSSYGYRFTQDPDAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRQLKVLEDVSIVGIQQVDRVVEVVEETL---KGHTVRLLS-------KNRLPQLDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTVEAIVSRAQSVIKEGVTEIWLSSEDTGAYGIDLGTDLPTLLRKLLEVVPDGVMLRVGMTNPPYILDHLDAIAEVLQHDRVYSFLHVPVQSGSDDVLLAM 323          
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Match: A0A0P1AL46_PLAHL (-like trna modifying archaeal-type n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL46_PLAHL)

HSP 1 Score: 349 bits (895), Expect = 2.240e-113
Identity = 172/278 (61.87%), Postives = 212/278 (76.26%), Query Frame = 1
Query:   31 HIPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDALSADVWVVNSCTVKDPSQSAFVNLA---RAEGKPLVVAGCVPQADRKLKDLEGLSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPKIRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAEGAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYILHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM 855
            H+PGTQ +W+KT+GC HNVSDSE M G+LA  GYR  E    A +W++NSCTVKDPSQ+AF++L    R + K +VVAGCVPQADR LK LEG+SIVG+QQ+DRVVE VE+TL+       S          K  LP LDLPKIR++P+VEI+P+STGCLGACTYCKTRHARG+LGSY P  +  R  +   EG  EIWLSSEDTGAYG+D+ + +  LL ++++V+P+GVMLR+GMTNPPYIL+ L AIA  LNH RV+SFLHVPVQSGSD VL+AM
Sbjct:   60 HVPGTQLIWMKTYGCSHNVSDSEYMQGVLASYGYRFTESPDIAQLWLLNSCTVKDPSQAAFMHLVIKGRKQNKAVVVAGCVPQADRHLKGLEGVSIVGIQQVDRVVEVVEETLKGHVVRLLS----------KNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEVIVSRAQSVINEGVTEIWLSSEDTGAYGIDIDTDLPALLHKLLQVLPDGVMLRVGMTNPPYILNHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLQAM 327          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7139.2.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A225UIR3_9STRA1.420e-11864.98MiaB-like tRNA modifying enzyme (Fragment) n=1 Tax... [more]
A0A8K1CM86_PYTOL6.150e-11863.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1GBY6_9STRA6.420e-11665.47Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
G4YYU5_PHYSP1.090e-11462.90Threonylcarbamoyladenosine tRNA methylthiotransfer... [more]
A0A2D4BV89_PYTIN2.630e-11463.54MiaB-like tRNA modifying enzyme, archaeal-type n=1... [more]
W2PQG6_PHYPN5.460e-11462.54Threonylcarbamoyladenosine tRNA methylthiotransfer... [more]
A0A3F2RYP2_9STRA5.710e-11463.18Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A484EFP4_BRELC6.550e-11463.54Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
M4BZB9_HYAAE2.020e-11362.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0P1AL46_PLAHL2.240e-11361.87-like trna modifying archaeal-type n=1 Tax=Plasmop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7139contigP-wetherbeei_contig7139:951..3188 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4787.PITG_07035T0
PFAMsRadical_SAM,UPF0004
Model size855
Max annot lvl4776|Peronosporales
KEGG rclassRC00003,RC03221
KEGG koko:K15865
KEGG ReactionR10649
Hectar predicted targeting categoryother localisation
Exons7
Evalue3.2e-116
EggNOG OGsCOG0621@1|root,KOG4355@2759|Eukaryota,3Q9D3@4776|Peronosporales
EC2.8.4.5
DescriptionUncharacterized protein family UPF0004
Cds size855
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7139.2.4prot_P-wetherbeei_contig7139.2.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7139 951..3188 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186961.0638351-CDS-P-wetherbeei_contig7139:950..10391683186961.0638351-CDS-P-wetherbeei_contig7139:950..1039Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7139 951..1039 +
1683186961.0734212-CDS-P-wetherbeei_contig7139:1217..13201683186961.0734212-CDS-P-wetherbeei_contig7139:1217..1320Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7139 1218..1320 +
1683186961.0814862-CDS-P-wetherbeei_contig7139:1528..15581683186961.0814862-CDS-P-wetherbeei_contig7139:1528..1558Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7139 1529..1558 +
1683186961.089521-CDS-P-wetherbeei_contig7139:1792..19861683186961.089521-CDS-P-wetherbeei_contig7139:1792..1986Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7139 1793..1986 +
1683186961.0975785-CDS-P-wetherbeei_contig7139:2198..22871683186961.0975785-CDS-P-wetherbeei_contig7139:2198..2287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7139 2199..2287 +
1683186961.1055508-CDS-P-wetherbeei_contig7139:2555..27581683186961.1055508-CDS-P-wetherbeei_contig7139:2555..2758Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7139 2556..2758 +
1683186961.1139448-CDS-P-wetherbeei_contig7139:3041..31881683186961.1139448-CDS-P-wetherbeei_contig7139:3041..3188Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7139 3042..3188 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7139.2.4

>prot_P-wetherbeei_contig7139.2.4 ID=prot_P-wetherbeei_contig7139.2.4|Name=mRNA_P-wetherbeei_contig7139.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=285bp
SHAVEDAPQGHIPGTQKVWLKTFGCGHNVSDSEVMAGLLAEQGYRLVEDA
LSADVWVVNSCTVKDPSQSAFVNLARAEGKPLVVAGCVPQADRKLKDLEG
LSIVGVQQIDRVVEAVEQTLQARKENTGSLESDRLPAGIKRTLPSLDLPK
IRRDPLVEIVPISTGCLGACTYCKTRHARGRLGSYAPAAVAGRVAAAAAE
GAMEIWLSSEDTGAYGLDLGSSISELLREVVEVVPEGVMLRLGMTNPPYI
LHSLPAIAAALNHPRVFSFLHVPVQSGSDAVLKAM
back to top

mRNA from alignment at P-wetherbeei_contig7139:951..3188+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7139.2.4 ID=mRNA_P-wetherbeei_contig7139.2.4|Name=mRNA_P-wetherbeei_contig7139.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2238bp|location=Sequence derived from alignment at P-wetherbeei_contig7139:951..3188+ (Phaeothamnion wetherbeei SAG_119_79)
AGCCATGCCGTAGAAGACGCGCCGCAAGGGCACATCCCAGGCACGCAAAA GGTCTGGCTAAAGACGTTCGGTTGCGGCCATAATGTGAGGTGAGAAAACT ATGATCCACGCCATCTCCCCGTTGGCTTTATTTTCACGCCGCGTCGACTG CCGAGTCCTCTTGCTTTCATCACCCTCTCTCCGTTGACCTGTAGAGAAGA CGCTCAAATTGACGTAATTCCTTCTTGGCAACATGCCCTTACACGCTGTG CATTTTGGTTGCTCCAGCGATTCGGAGGTCATGGCAGGCCTCCTTGCCGA GCAGGGATATCGCCTTGTCGAGGACGCGCTCTCCGCGGACGTATGGGTGG TTAATTCCTGCACCGTGAAGGTAAGGGGAAAGATTGGAAGGGAGGGAGAT CATAATTTGCACAGAGCAGAACAGCGTTCCGAGTGGGAAAGAAGAAAAGA AGACGCCCGAGATCTTAAACTTCTGCCAGATCTGCAAGTTATCTGTGTTT TACTCCTGATCATATAATAACCCTCTCCGTCCACTTCACACCATACTCTT CTCTTTGAAACCCAATTCCCCCATCCAGGATCCAAGCCAATCAGCGTTCG TGAACCTGGTCAAAAAGGCACGACAACCTGAGTCACGCCTTTCGCAAATC CCGCGTATATGCATCAGAAAACGTGCCCCCTTAGTTTTCTTCTCAATTCG CTGGGCGGCTTCTGCTGCGACGGCATGCGACGGTATGGTGGCCCCGGCCA ACAGCGCCACCGCTTTGTTACTAGCGAGCAATGACGTTAACTCCGCCGGC ACCGCAACTCTTTGCTCTCGCTGCATGGACGTTGGTCGGTAGGCACGGGC GGAAGGGAAGCCGCTGGTGGTTGCGGGCTGCGTCCCACAGGCGGACCGCA AGCTGAAGGACCTCGAGGGCCTCTCCATCGTCGGCGTGCAGCAGATTGAC CGCGTCGTTGAAGCCGTTGAACAGACATTACAGGCAAGGAAAGAGAATAC GGGATCGCTTGAATCCGACCGACTTCCAGCGGGGATGTGGCGGCGTTAGC GATGGCGGTGGATCGCGCCGGCAATGCCGGCAATGCTGGCGGTATCAAAA CGCGGTCCGAATCTGATGTTGCCGTGGTGTCGCACGTCCGCACGTCCGTT GTCCGTGCCGGCGGATCCCGTATGGACAGGACTATAACTTCTTGTTCTGC CGGGCCATTACTTACCGACCTGCAGGGCAACACGGTGCACATGCTGAGCA AGCGCACACTGCCGTCACTCGACCTCCCGAAGATCCGCCGCGACCCGCTC GTCGAAATTGTGCCCATCTCTACGGGCTGCCTGGGAGGTGAGCATTCGCC GATGGGGCGCGGCGGCGGCCGACACCCACCAGCAGTTTTCCCTTATCGTT TCGACTGAGCCTTTTGTGAAGGTAGACGGGCCGCATGATGCCTCTTCTGC GCCTCCCTTTTTTCGTTTGAGAACATGATGGCGTCGAATTTTGTCAGAGC AGTCTTGCCACGTGCTCACAGTGTTTCTTTTCTCCGTTCTCGTTGTTTGG CTTTTCTACCGCCGCATCATCGCCATGCAACACCGTCACGCTGGCACCAA AACAGCTTGTACCTATTGCAAGACACGCCACGCCCGCGGGCGTCTCGGCA GCTATGCGCCGGCCGCCGTGGCGGGGCGCGTGGCCGCCGCGGCGGCGGAG GGCGCCATGGAGATCTGGTTATCCTCAGAAGACACCGGTGCCTACGGCCT CGACTTGGGCTCCTCCATCTCCGAGCTCTTGCGGGAGGTCGTCGAGGTGG TGCCGGAGGTGCGTGAGCTGCACGTACCCCGGTAACGGTCGGCTGAAGGT TTCGGTAATTTTCGCTTTGTGGTGGATGCTGCAAAAGGCGTGACGGCATC ACTTGGTGTGGTAAGCTCGTCAGCTTCGTTCGCCGCCGGCTGCCGCTACC AGCTTTGCTGCTGTCGCCACCGCCGCGGCCGCTGCCACCCCTGAGTGGCG TAAAAGCCGAAGCGGAGCCGTCACCGGTGCTATAAACTGTTTTGGCTTTG AGATCCTTGTCCCAACCCCTCCCTTCGATCCGACACGGCAGGGCGTGATG CTGCGGCTGGGCATGACCAACCCGCCCTACATCCTCCACAGCCTCCCGGC CATCGCTGCCGCGCTGAATCACCCCCGTGTCTTCAGCTTCCTGCACGTAC CGGTCCAGTCGGGCTCCGACGCCGTCCTGAAGGCTATG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7139:951..3188+

>mRNA_P-wetherbeei_contig7139.2.4 ID=mRNA_P-wetherbeei_contig7139.2.4|Name=mRNA_P-wetherbeei_contig7139.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig7139:951..3188+ (Phaeothamnion wetherbeei SAG_119_79)
AGCCATGCCGTAGAAGACGCGCCGCAAGGGCACATCCCAGGCACGCAAAA
GGTCTGGCTAAAGACGTTCGGTTGCGGCCATAATGTGAGCGATTCGGAGG
TCATGGCAGGCCTCCTTGCCGAGCAGGGATATCGCCTTGTCGAGGACGCG
CTCTCCGCGGACGTATGGGTGGTTAATTCCTGCACCGTGAAGGATCCAAG
CCAATCAGCGTTCGTGAACCTGGCACGGGCGGAAGGGAAGCCGCTGGTGG
TTGCGGGCTGCGTCCCACAGGCGGACCGCAAGCTGAAGGACCTCGAGGGC
CTCTCCATCGTCGGCGTGCAGCAGATTGACCGCGTCGTTGAAGCCGTTGA
ACAGACATTACAGGCAAGGAAAGAGAATACGGGATCGCTTGAATCCGACC
GACTTCCAGCGGGGATCAAGCGCACACTGCCGTCACTCGACCTCCCGAAG
ATCCGCCGCGACCCGCTCGTCGAAATTGTGCCCATCTCTACGGGCTGCCT
GGGAGCTTGTACCTATTGCAAGACACGCCACGCCCGCGGGCGTCTCGGCA
GCTATGCGCCGGCCGCCGTGGCGGGGCGCGTGGCCGCCGCGGCGGCGGAG
GGCGCCATGGAGATCTGGTTATCCTCAGAAGACACCGGTGCCTACGGCCT
CGACTTGGGCTCCTCCATCTCCGAGCTCTTGCGGGAGGTCGTCGAGGTGG
TGCCGGAGGGCGTGATGCTGCGGCTGGGCATGACCAACCCGCCCTACATC
CTCCACAGCCTCCCGGCCATCGCTGCCGCGCTGAATCACCCCCGTGTCTT
CAGCTTCCTGCACGTACCGGTCCAGTCGGGCTCCGACGCCGTCCTGAAGG
CTATG
back to top