mRNA_P-wetherbeei_contig7133.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: A0A6H5LD19_9PHAE (MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD19_9PHAE) HSP 1 Score: 246 bits (629), Expect = 5.110e-72 Identity = 176/381 (46.19%), Postives = 224/381 (58.79%), Query Frame = 1
Query: 100 MSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSH--TQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDS-GRVGKMEVTCFQSVKKASEPSLPPSXXXXXXXXXXXXXXXXXXXXXXXXREVALSLLPPEGGSSV-PLADAAARIVALQDTLYHEERDAYLTALRQNRTVAPACRDTGPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGQSGGDGLAERMYCAAVYQKALSFLMGESAMPLVHSLRARLDDLKSQASELRRQNQSKWEALTPQQQEEVRNLVEKRRHRCCSAIATCTGAGQFAA 1230
MSL+ CTL+W AF TCASHA +TEKQE+MGLLLG W D + T +V ++HAM+LTRTD+R+DRVEVGY+QLA A+ + E +SA++ + TRVVGWYHSHPHITV+PS VDV TQ YQ MD F+GLIFS+F ED +VG +EVT FQ+ + S+P XXXXXXXXXXXXXXXX EVALSL P GSS PL+DA R+V LQDTL+ EER YL ALRQN + + G D LA + + VY K+L L G+SA+PL +LR++L L+++A+ L ++ +LTP + EE + CSA G G F A
Sbjct: 1 MSLQRCTLSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKVGTIEVTAFQA-RDTSDPM----DVDAAVGXXXXXXXXXXXXXXXXRTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAMVGEEESFDTESPQDTRTRRRG--------------------------EGEDRLALKAFLLGVYSKSLVALSGDSAVPLAQTLRSQLKILQNRAAALEQRQLELRASLTPGELEEALASARAKLRAPCSA-----GIGAFQA 345
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: D7FVU5_ECTSI (MPN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU5_ECTSI) HSP 1 Score: 210 bits (534), Expect = 2.370e-58 Identity = 168/354 (47.46%), Postives = 216/354 (61.02%), Query Frame = 1
Query: 184 MGLLLGSWEDDSSH--TQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDS-GRVGKMEVTCFQSVKKASEPSLPPSXXXXXXXXXXXXXXXXXXXXXXXXR-EVALSLLPPEGGSSV-PLADAAARIVALQDTLYHEERDAYLTALRQNRTVAPACRDTGPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGQSGGDGLAERMYCAAVYQKALSFLMGESAMPLVHSLRARLDDLKSQASELRRQNQSKWEALTPQQQEEVRNLVEKRRHRCCSAIATCTGAGQFAA 1230
MGLLLG W D + T +V ++HAM+LTRTD+R+DRVEVGY+QLA A+ + E++SA++ + TRVVGWYHSHPHITV+PS VDV TQ YQ MD F+GLIFS+F ED +VG +EVT FQ+ + SEP +XXXXXXXXXXXXXXXXXXXXXXXXR EVALSL P GSS PL+DA R+V LQDTL+ EER YL ALRQN + + P A + GG L +++C+AVY K+L+ L G+SA+PL +LR++L+ L+++A+ L + LTP + E + CSA G G F A
Sbjct: 1 MGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAEKMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKVGTIEVTAFQA-RDTSEPMDVDAXXXXXXXXXXXXXXXXXXXXXXXXRTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAMVG---EEEPFDAESPQDTRTRR------------------------RGGGIDLLSKIFCSAVYSKSLAALSGDSAVPLAQTLRSQLNILQNRAAALEQHQVELRALLTPGELEGALASASAKLRAPCSA-----GIGAFQA 321
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: A0A836CFJ1_9STRA (MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ1_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.610e-53 Identity = 112/283 (39.58%), Postives = 158/283 (55.83%), Query Frame = 1
Query: 259 MVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSGRVGKMEVTCFQSVKKASEPSLPPSXXXXXXXXXXXXXXXXXXXXXXXXREVALSLLPPEGGSSVPLADAAARIVALQDTLYHEERDAYLTALRQNRTVAPACRDTGPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGQSGGDGLAERMYCAAVYQKALSFLMGESAMPLVHSLRARLDDLKSQASELRRQN 1107
MVLTRTD++ DR EV EQLA+AS++ E +S ++ K RV GWYHSHPHITV+PS VDV TQ YQ MD GF+GLIF++F +D +VGK+EVT FQS+K +S S + + L++ PP+GGS+VP+ADA + LQ+TL+ EER AYL+AL+Q+R +G + D L E++YC+AVY K+L+ L+GES +PL+ +L+A +L ++A L + N
Sbjct: 1 MVLTRTDKQPDRCEVSVEQLAAASTVAENMSRQLGKTVRVCGWYHSHPHITVLPSHVDVRTQMQYQFMDEGFIGLIFAVFQQDGQKVGKIEVTAFQSMKSSSAASQ--VHTHDAGTSASDSGKQLPVHSEWVGKNIPLAIHPPDGGSAVPIADALNVLCGLQNTLFEEERAAYLSALQQHR--------------------------------------------GLGATATQDDLLEQVYCSAVYSKSLTSLLGESMLPLLQTLKAHAKNLHAKADALEQSN 237
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: UPI00145B7F85 (lys-63-specific deubiquitinase BRCC36 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145B7F85) HSP 1 Score: 167 bits (424), Expect = 2.240e-43 Identity = 87/173 (50.29%), Postives = 110/173 (63.58%), Query Frame = 1
Query: 52 ISLHFDSRPEESNRVRMSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSG-RVGKMEVTCFQSVKKASE 567
F R + +R M++ C L AFL C SHA +TEK+E+MGL +G E R V + ++L R+D+RKDRVE+ EQL++AS+ E L+ +P RVVGWYHSHPHITV PS VDV TQA YQ +D GFVGLIFS F+ED R G++ TCFQS K SE
Sbjct: 116 FGFSFSVRCDAVDRAGMAVSACHLESDAFLVCMSHALSTEKEEVMGLCIGELEPS------RVVHVHSVIILRRSDKRKDRVEISPEQLSAASTEAERLADSTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQGFVGLIFSCFIEDKNTRTGRVLYTCFQSTAKGSE 282
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: UPI0013F2751B (lys-63-specific deubiquitinase BRCC36 n=1 Tax=Hylobates moloch TaxID=81572 RepID=UPI0013F2751B) HSP 1 Score: 161 bits (408), Expect = 2.260e-43 Identity = 84/162 (51.85%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 91 RVRMSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSG-RVGKMEVTCFQSVK--KASE 567
+V +++ L AFL C +HA +TEK+E+MGL +G DD+ R V I ++L R+D+RKDRVE+ EQL++AS+ E L+ +P RVVGWYHSHPHITV PS VDV TQA YQ MD GFVGLIFS F+ED + G++ TCFQS++ K+SE
Sbjct: 4 QVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSE 165
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: A0A3B3ZMV5_9GOBI (Lys-63-specific deubiquitinase n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZMV5_9GOBI) HSP 1 Score: 163 bits (412), Expect = 6.400e-43 Identity = 84/157 (53.50%), Postives = 105/157 (66.88%), Query Frame = 1
Query: 100 MSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSG-RVGKMEVTCFQSVKKASE 567
M++ C L AFL C SHA +TEK+E+MGL +G E R V + ++L R+D+RKDRVE+ EQL++AS+ E L+ +P RVVGWYHSHPHITV PS VDV TQA YQ +D GFVGLIFS F+ED R G++ TCFQS K SE
Sbjct: 15 MAVSACHLESDAFLVCMSHALSTEKEEVMGLCIGELEPS------RVVHVHSVIILRRSDKRKDRVEISPEQLSAASTEAERLADSTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQGFVGLIFSCFIEDKNTRTGRVLYTCFQSTAKGSE 165
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: A0A3Q2P3G6_FUNHE (Lys-63-specific deubiquitinase n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2P3G6_FUNHE) HSP 1 Score: 157 bits (398), Expect = 2.680e-41 Identity = 91/180 (50.56%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 43 WRP-ISLHFDSRPE-ESNRVRMSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSG-RVGKMEVTCFQSVK--KASE 567
WRP ++L+F + E E + + LE AFL C +HA +TEK+E+MGL +G E R V I ++L R+D+RKDRVE+ EQL++AS+ E L+ KP RVVGWYHSHPHITV PS VDV TQA YQ +D GFVGLIFS F+ED R G++ TCFQS + K SE
Sbjct: 2 WRPQVALNFRNVAEYEIHATAVHLES-----DAFLVCMNHALSTEKEEVMGLCIGEVELS------RIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLADTTGKPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQGFVGLIFSCFIEDKNTRTGRVLYTCFQSAQAQKGSE 170
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: A0A8C6ISZ8_MELUD (Lys-63-specific deubiquitinase n=4 Tax=Neognathae TaxID=8825 RepID=A0A8C6ISZ8_MELUD) HSP 1 Score: 157 bits (396), Expect = 5.350e-41 Identity = 85/159 (53.46%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 100 MSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSG-RVGKMEVTCFQSVK--KASE 567
M+++ L AFL C +HA +TEK+E+MGL +G E D+S R V I ++L R+D+RKDRVE+ EQL++AS+ E L+ +P RVVGWYHSHPHITV PS VDV TQA YQ MD GFVGLIFS F+ED + G++ TCFQS++ K+SE
Sbjct: 1 MAVQAVYLEADAFLVCLNHALSTEKEEVMGLCIG--EVDTS----RIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSE 153
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: A0A6J0UM29_9SAUR (Lys-63-specific deubiquitinase n=7 Tax=Dipnotetrapodomorpha TaxID=1338369 RepID=A0A6J0UM29_9SAUR) HSP 1 Score: 157 bits (397), Expect = 6.890e-41 Identity = 86/159 (54.09%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 100 MSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSG-RVGKMEVTCFQSVK--KASE 567
M+++ L AFL C +HA +TEK+E+MGL +G E D+S R V I ++L R+D+RKDRVE+ EQL++AS+ E L+ +P RVVGWYHSHPHITV PS VDV TQA YQ MD GFVGLIFS F+ED + G++ TCFQSV+ K+SE
Sbjct: 1 MAVQAAHLEADAFLVCLNHALSTEKEEVMGLCIG--EVDTS----RIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKSSE 153
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Match: A0A293MEP4_ORNER (MPN domain-containing protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MEP4_ORNER) HSP 1 Score: 157 bits (398), Expect = 7.030e-41 Identity = 83/160 (51.88%), Postives = 112/160 (70.00%), Query Frame = 1
Query: 100 MSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIEHAMVLTRTDRRKDRVEVGYEQLASASSLCEELSARVNKPTRVVGWYHSHPHITVVPSQVDVATQASYQQMDAGFVGLIFSIFVEDSG-RVGKMEVTCFQSVKKASEPSL 576
MS + L+ ++ C +HA +TEK+E+MGLL+G E D++ R I +VL R+D+RKDRVE+ EQL+ AS+ E L+ + +P RV+GWYHSHPHITV PS VDV TQA YQ MD GFVGLIFS+F +D+ +V +++VTCFQSV +A E L
Sbjct: 1 MSTKRVNLSMDVYMVCLNHALSTEKEEVMGLLIG--EIDTT----RVAHISAVIVLRRSDKRKDRVEISPEQLSDASTQAEMLAHELGRPMRVLGWYHSHPHITVWPSHVDVQTQAIYQMMDEGFVGLIFSVFNQDNTTKVNQIQVTCFQSVNQAGEGDL 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7133.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7133.1.1 >prot_P-wetherbeei_contig7133.1.1 ID=prot_P-wetherbeei_contig7133.1.1|Name=mRNA_P-wetherbeei_contig7133.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=416bp MSLEHCTLTWPAFLTCASHAATTEKQEIMGLLLGSWEDDSSHTQRRSVRIback to top mRNA from alignment at P-wetherbeei_contig7133:38..2345- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7133.1.1 ID=mRNA_P-wetherbeei_contig7133.1.1|Name=mRNA_P-wetherbeei_contig7133.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2308bp|location=Sequence derived from alignment at P-wetherbeei_contig7133:38..2345- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7133:38..2345- >mRNA_P-wetherbeei_contig7133.1.1 ID=mRNA_P-wetherbeei_contig7133.1.1|Name=mRNA_P-wetherbeei_contig7133.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig7133:38..2345- (Phaeothamnion wetherbeei SAG_119_79)back to top |