mRNA_P-wetherbeei_contig7121.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7121.1.1
Unique NamemRNA_P-wetherbeei_contig7121.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A3C0TVE2_9PROT (Short-chain dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVE2_9PROT)

HSP 1 Score: 441 bits (1134), Expect = 2.160e-155
Identity = 223/257 (86.77%), Postives = 241/257 (93.77%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGATAF 771
            MSLFDLTGKV IVTGATKGIGEAIA RLAEHG+KVVISSRK D+CERVAAAIN K+    + A+P+ACNIG+K+QLQNLVDQT AKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIM+SNILSNQWLCNMVLPQMI R+DG+I IISSIGGHHGN+VIG YCISKAADMQLARNIA+EFG +NIRANA+APGLVKT+FAKALWSDP+IL DSVSGSTLKRIGAPDEIAGA VFLASAAGAFV+GQTINVDGGATAF
Sbjct:    1 MSLFDLTGKVGIVTGATKGIGEAIAWRLAEHGAKVVISSRKMDACERVAAAINAKY---PDAAIPVACNIGHKDQLQNLVDQTMAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMKSNILSNQWLCNMVLPQMIERRDGTITIISSIGGHHGNAVIGAYCISKAADMQLARNIALEFGEYNIRANAVAPGLVKTDFAKALWSDPKILEDSVSGSTLKRIGAPDEIAGAVVFLASAAGAFVSGQTINVDGGATAF 254          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A351T812_9PROT (Short-chain dehydrogenase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T812_9PROT)

HSP 1 Score: 429 bits (1103), Expect = 1.270e-150
Identity = 213/256 (83.20%), Postives = 231/256 (90.23%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGATA 768
            M+LFDL+GKVAIVTG+TKGIGEAIAHR AEHG+KVV+SSRK + C++VA  IN KWGKGEEVA P+ CNIG KE+LQNLVD+T+ KWG VTTLVCNAAVNP FGS LDIPDDAFERIM+SNI SN WLCNMVLPQMI R+DGSI IISSIGGHHGN+VIG YCISKAADMQLARN+A EFG HNIRANAIAPGL+KT FAKALWSDPEIL +S SGS LKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGG TA
Sbjct:    1 MTLFDLSGKVAIVTGSTKGIGEAIAHRFAEHGAKVVVSSRKAEMCDKVAGEINEKWGKGEEVAYPVPCNIGVKEELQNLVDRTNDKWGMVTTLVCNAAVNPFFGSTLDIPDDAFERIMKSNIQSNHWLCNMVLPQMIERRDGSITIISSIGGHHGNTVIGAYCISKAADMQLARNLAAEFGEHNIRANAIAPGLIKTYFAKALWSDPEILENSTSGSALKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGVTA 256          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A7Y4WQQ6_9PROT (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4WQQ6_9PROT)

HSP 1 Score: 363 bits (931), Expect = 1.960e-124
Identity = 176/256 (68.75%), Postives = 213/256 (83.20%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGATA 768
            M LFDL+GK+A++TG+TKGIGEAIAHR+AEHG+KVV+SSRK D C++V A IN KWGKG+EVA  + CNI  + QL+ LV +T AKWGK+  LVCNAAVNP FGSM  IPD+AF++IM SN+ SN  LCNM++P+M+ RKDG+III+SSIGG  G+ V+G YCISKAAD QLARNIA E+GVHN+RAN IAPGLVKT+FAKALW +PEIL  S + + L+RIG PDEIAGAAV+LAS A AF+TGQTI VDGG TA
Sbjct:    1 MQLFDLSGKIAVITGSTKGIGEAIAHRMAEHGAKVVVSSRKADVCDKVTADINQKWGKGKEVAYAVPCNINERSQLELLVQKTRAKWGKIDVLVCNAAVNPVFGSMSQIPDEAFDKIMGSNVRSNHQLCNMIIPEMVERKDGAIIIVSSIGGLRGSPVLGAYCISKAADFQLARNIACEYGVHNVRANCIAPGLVKTDFAKALWDNPEILKRSTANAPLRRIGEPDEIAGAAVYLASKAAAFMTGQTIVVDGGVTA 256          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A8I1RKD6_9PROT (Glucose 1-dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1RKD6_9PROT)

HSP 1 Score: 361 bits (926), Expect = 1.090e-123
Identity = 174/256 (67.97%), Postives = 214/256 (83.59%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGATA 768
            M+LFDLTGK AIVTG+TKGIGEAIAHRLAEHG++VV+SSRK D+CE+VA  IN K+GKG+ VA PI CNI +KEQLQ LVDQ+   +G++  LVCNAA+NP++G M  +PD+AF++IM +N+ SN WLC MVLP+M+ RKDGS+II+SSIGG  G+ V+G YCISKAADMQLARN+AVE+G H IRAN IAPGL++T+FA+ALW +PE L  S +G+ L+RIG PDEIAGAAVFLAS AGAF TGQT  +DGGA A
Sbjct:    1 MNLFDLTGKTAIVTGSTKGIGEAIAHRLAEHGAQVVVSSRKADACEKVAGDINAKYGKGKTVAAPIPCNINHKEQLQQLVDQSRKTFGRIDILVCNAALNPYYGPMSGMPDEAFDKIMGANVRSNHWLCQMVLPEMVERKDGSVIIVSSIGGLRGSPVLGAYCISKAADMQLARNLAVEYGQHGIRANCIAPGLIRTDFARALWENPETLKRSTAGAALRRIGEPDEIAGAAVFLASKAGAFTTGQTFVIDGGALA 256          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A6N6VNS9_9HYPH (Glucose 1-dehydrogenase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VNS9_9HYPH)

HSP 1 Score: 353 bits (906), Expect = 1.130e-120
Identity = 178/255 (69.80%), Postives = 207/255 (81.18%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGAT 765
            MSLFDLTGKVAIVTG+TKGIGEAI HRLAEHG+KVV+SSRK D+C++VA  IN +   G  +A+P  CNI  K  LQ LVD T+  WGKV  LVCNAAVNP FGS  DIPDDAF++IM SN+ SN WLCNMV+PQM+ RKDGSIIIISSIGG  G+SV+G YC+SKAAD QLARN+AVE+G HN+RAN IAPGL+KT FA+ALW +P+IL  S S + LKRIG PDEIAGAAVFLA  AGAF+TGQ + +DGG T
Sbjct:    1 MSLFDLTGKVAIVTGSTKGIGEAIVHRLAEHGAKVVVSSRKADACDKVAGEINARHA-GAAIAVP--CNIADKADLQRLVDTTNKTWGKVDILVCNAAVNPFFGSSKDIPDDAFDKIMSSNVKSNHWLCNMVIPQMVERKDGSIIIISSIGGLRGSSVLGAYCLSKAADFQLARNLAVEYGHHNVRANCIAPGLIKTRFAQALWDNPDILEKSTSTAPLKRIGMPDEIAGAAVFLAGPAGAFMTGQQLVIDGGVT 252          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A2Z4UFH3_9HYPH (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2Z4UFH3_9HYPH)

HSP 1 Score: 352 bits (904), Expect = 2.270e-120
Identity = 175/255 (68.63%), Postives = 207/255 (81.18%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGAT 765
            M LFDL+GK AI+TG+T+GIGEAIAHR+AEHG+ VVISSRK D+CE+V A IN K+    E A+ + CNI  KE LQ LVD T+ KWGKV +LVCNAAVNP +GS  DIPDDAF++IM SN+ SN WLCNMVLPQMI RK+G+I I+SSIGG  G+ V+G YCISKAAD QLARN+AVEFG HNIR NAIAPGL+KT+FAKALW +PE L  S S + L+RIG PDEIAGAAVFL+S AGAF+TGQ + +DGG T
Sbjct:    1 MELFDLSGKTAIITGSTRGIGEAIAHRMAEHGANVVISSRKADACEKVTAEINAKY---PEKAMAVPCNISSKEDLQRLVDTTNDKWGKVDSLVCNAAVNPFYGSAADIPDDAFDKIMSSNVKSNHWLCNMVLPQMIERKEGNITIVSSIGGLKGSPVLGAYCISKAADFQLARNLAVEFGQHNIRVNAIAPGLIKTDFAKALWDNPETLERSTSNAPLRRIGLPDEIAGAAVFLSSKAGAFMTGQGLVIDGGVT 252          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A7HPR3_PARL1 (Short-chain dehydrogenase/reductase SDR n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A7HPR3_PARL1)

HSP 1 Score: 350 bits (898), Expect = 1.860e-119
Identity = 175/256 (68.36%), Postives = 211/256 (82.42%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGATA 768
            M+LFDL+GKVAIVTG+TKGIGEAI HR+AEHG+KVV+SSRK D+CE+VA  IN K+  G+ +A+P  CNI  K  LQ LVD T  +WG+V +LVCNAAVNP+FG   D+PDDAF++IM +NI SN WL +MVLPQM+ RKDGSI I+SSIGG  G+ ++G YC+SKAADMQLARN+AVE+G  NIR N IAPGL+KT FAKALW +PEIL  S +G+ LKRIG PDEIAGAAVFLAS AGAF+TGQT+ +DGGATA
Sbjct:    1 MTLFDLSGKVAIVTGSTKGIGEAIVHRMAEHGAKVVVSSRKADACEKVAGEINAKYA-GQAIAVP--CNISEKSDLQRLVDTTMKEWGRVDSLVCNAAVNPYFGPSKDLPDDAFDKIMGANIKSNHWLAHMVLPQMVERKDGSITIVSSIGGLRGSPILGAYCVSKAADMQLARNLAVEYGPSNIRVNCIAPGLIKTYFAKALWDNPEILERSTAGAPLKRIGMPDEIAGAAVFLASPAGAFMTGQTMVIDGGATA 253          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A3C0MA86_9PROT (Short-chain dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0MA86_9PROT)

HSP 1 Score: 350 bits (898), Expect = 2.060e-119
Identity = 175/255 (68.63%), Postives = 208/255 (81.57%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGAT 765
            M+LFDLTGKVA+VTG+TKGIGEAI HRLAEHG+KVV+SSRK D CE VA  IN  +G+  +VA+P+ACNI YK+QLQ LV  T  K+GK+  L+CNAAVNP+FG    I DDAF++IM  N+ SN WL NMVLP+M+ RKDG III+SSIGG  G+ V+G YCISKAAD QLARNIAVE+G H IRAN IAPGL+KT+FA+ALW +PEIL  S  G+ LKRIG PDEIAGAAVFL+S AGAF+TGQT+ +DGGAT
Sbjct:    1 MTLFDLTGKVAVVTGSTKGIGEAIVHRLAEHGAKVVVSSRKADVCEAVAKDINKAFGQHGDVAIPVACNISYKDQLQALVATTRDKYGKIDILICNAAVNPYFGPAAGITDDAFDKIMDVNVRSNFWLTNMVLPEMVERKDGVIIIVSSIGGLRGSPVLGAYCISKAADFQLARNIAVEYGHHGIRANCIAPGLIKTDFARALWENPEILKRSTEGAPLKRIGLPDEIAGAAVFLSSRAGAFMTGQTMVIDGGAT 255          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: A0A081BA80_9HYPH (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BA80_9HYPH)

HSP 1 Score: 344 bits (882), Expect = 5.040e-117
Identity = 174/253 (68.77%), Postives = 207/253 (81.82%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGG 759
            M LFDL GKVA+VTG+TKGIG+AI  R+AEHG+KVV+SSRK D+C+ VAA IN K+  G+ +A+P  CNI  K QLQNLVD+T+  +GK+  LVCNAAVNP+FG   DIPD+AF+RIM SN+ SN WLC+MVLPQM  RKDGSIIIISSIGG HG+S+IG YCISKAAD QLARN++VEFG  NIR N IAPGL++T FAKALW DP+IL  S + + LKRIG PDEIAGAAVFLAS AGAF+TGQ + +DGG
Sbjct:    1 MELFDLKGKVALVTGSTKGIGKAIVTRMAEHGAKVVVSSRKADACDEVAAEINAKY-PGQAIAVP--CNIADKAQLQNLVDKTNEAFGKIDVLVCNAAVNPYFGPSKDIPDEAFDRIMSSNVKSNHWLCHMVLPQMQERKDGSIIIISSIGGLHGSSIIGAYCISKAADFQLARNLSVEFGKDNIRVNCIAPGLIQTYFAKALWDDPDILKQSTASAPLKRIGQPDEIAGAAVFLASKAGAFMTGQQMVIDGG 250          
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Match: X5MMF6_9HYPH (Sorbitol-6-phosphate 2-dehydrogenase n=2 Tax=Parvibaculaceae TaxID=2813035 RepID=X5MMF6_9HYPH)

HSP 1 Score: 343 bits (881), Expect = 7.940e-117
Identity = 174/255 (68.24%), Postives = 208/255 (81.57%), Query Frame = 1
Query:    1 MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAAAINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVNPHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSIGGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFAKALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINVDGGAT 765
            MSLFDLTGKVA+VTG+TKGIGEAI  R+AEHG+KVV+SSRK D+C++VAA IN   G+G  VA+P  CNI +KE+L+ LV+ T   +G++  LVCNAAVNP+FGS  +IPD+AF+++M  NI SN WLCNMVLPQM+ R +GSI IISSIGG  G+ ++G Y ISKAADMQLARN+AVE+G   IRANAIAPGL+KT FAKALW D  IL  S SGS LKRIG PDEIAGAAVFLAS AGAF+TGQT+ +DGGAT
Sbjct:    1 MSLFDLTGKVALVTGSTKGIGEAIVKRMAEHGAKVVVSSRKADACDKVAAEINAAHGEGTAVAIP--CNISHKEELEKLVNATMKAFGRIDALVCNAAVNPYFGSSAEIPDEAFQKVMDVNIKSNHWLCNMVLPQMLERGEGSITIISSIGGLKGSPILGAYAISKAADMQLARNLAVEYGDKGIRANAIAPGLIKTYFAKALWDDENILKASTSGSALKRIGIPDEIAGAAVFLASDAGAFMTGQTMTIDGGAT 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7121.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TVE2_9PROT2.160e-15586.77Short-chain dehydrogenase n=1 Tax=Alphaproteobacte... [more]
A0A351T812_9PROT1.270e-15083.20Short-chain dehydrogenase n=3 Tax=Alphaproteobacte... [more]
A0A7Y4WQQ6_9PROT1.960e-12468.75SDR family oxidoreductase n=1 Tax=Alphaproteobacte... [more]
A0A8I1RKD6_9PROT1.090e-12367.97Glucose 1-dehydrogenase n=1 Tax=Alphaproteobacteri... [more]
A0A6N6VNS9_9HYPH1.130e-12069.80Glucose 1-dehydrogenase n=1 Tax=Parvibaculum sedim... [more]
A0A2Z4UFH3_9HYPH2.270e-12068.633-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
A7HPR3_PARL11.860e-11968.36Short-chain dehydrogenase/reductase SDR n=8 Tax=Al... [more]
A0A3C0MA86_9PROT2.060e-11968.63Short-chain dehydrogenase n=1 Tax=Alphaproteobacte... [more]
A0A081BA80_9HYPH5.040e-11768.77Short-chain dehydrogenase/reductase SDR n=1 Tax=Te... [more]
X5MMF6_9HYPH7.940e-11768.24Sorbitol-6-phosphate 2-dehydrogenase n=2 Tax=Parvi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7121contigP-wetherbeei_contig7121:562..1335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1282876.BAOK01000001_gene2979
PFAMsadh_short_C2
Model size774
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.28e-121
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MWGC@1224|Proteobacteria,2TSNX@28211|Alphaproteobacteria
Descriptionshort-chain dehydrogenase
Cds size774
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186959.7002213-CDS-P-wetherbeei_contig7121:561..13351683186959.7002213-CDS-P-wetherbeei_contig7121:561..1335Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7121 562..1335 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7121.1.1prot_P-wetherbeei_contig7121.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7121 562..1335 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7121.1.1

>prot_P-wetherbeei_contig7121.1.1 ID=prot_P-wetherbeei_contig7121.1.1|Name=mRNA_P-wetherbeei_contig7121.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp
MSLFDLTGKVAIVTGATKGIGEAIAHRLAEHGSKVVISSRKQDSCERVAA
AINGKWGKGEEVALPIACNIGYKEQLQNLVDQTDAKWGKVTTLVCNAAVN
PHFGSMLDIPDDAFERIMRSNILSNQWLCNMVLPQMIARKDGSIIIISSI
GGHHGNSVIGGYCISKAADMQLARNIAVEFGVHNIRANAIAPGLVKTEFA
KALWSDPEILADSVSGSTLKRIGAPDEIAGAAVFLASAAGAFVTGQTINV
DGGATAF*
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mRNA from alignment at P-wetherbeei_contig7121:562..1335+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7121.1.1 ID=mRNA_P-wetherbeei_contig7121.1.1|Name=mRNA_P-wetherbeei_contig7121.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig7121:562..1335+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCTTTTTGATCTGACGGGAAAAGTCGCCATTGTAACAGGTGCCAC CAAAGGCATTGGCGAGGCGATAGCCCATCGCCTTGCCGAACACGGGTCTA AAGTCGTGATTTCCAGCCGCAAGCAGGATTCCTGTGAACGGGTCGCTGCT GCGATTAACGGGAAATGGGGCAAGGGGGAAGAGGTTGCACTCCCGATAGC CTGTAATATCGGCTATAAGGAGCAGTTGCAGAACCTGGTCGATCAGACGG ATGCAAAATGGGGCAAGGTTACCACACTGGTTTGTAATGCGGCCGTGAAC CCGCATTTTGGCTCGATGCTGGATATTCCTGATGACGCCTTTGAGCGGAT CATGCGGTCGAATATCCTGTCGAACCAGTGGCTATGCAATATGGTGTTGC CACAGATGATTGCGCGCAAAGACGGTTCCATTATCATTATTTCGTCAATC GGTGGTCACCATGGCAATTCAGTGATTGGGGGCTACTGCATTTCCAAAGC AGCCGATATGCAGCTTGCCCGTAACATCGCCGTTGAATTTGGGGTGCATA ATATTCGCGCCAATGCCATTGCGCCCGGCCTGGTCAAGACAGAATTTGCA AAGGCGCTCTGGAGCGATCCGGAAATACTTGCGGATTCGGTGTCGGGTTC CACCCTGAAGCGAATCGGTGCGCCAGACGAGATTGCAGGGGCCGCAGTAT TTCTTGCCTCGGCGGCGGGGGCATTTGTTACAGGCCAGACCATAAATGTG GATGGTGGGGCGACGGCATTTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7121:562..1335+

>mRNA_P-wetherbeei_contig7121.1.1 ID=mRNA_P-wetherbeei_contig7121.1.1|Name=mRNA_P-wetherbeei_contig7121.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig7121:562..1335+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCTTTTTGATCTGACGGGAAAAGTCGCCATTGTAACAGGTGCCAC
CAAAGGCATTGGCGAGGCGATAGCCCATCGCCTTGCCGAACACGGGTCTA
AAGTCGTGATTTCCAGCCGCAAGCAGGATTCCTGTGAACGGGTCGCTGCT
GCGATTAACGGGAAATGGGGCAAGGGGGAAGAGGTTGCACTCCCGATAGC
CTGTAATATCGGCTATAAGGAGCAGTTGCAGAACCTGGTCGATCAGACGG
ATGCAAAATGGGGCAAGGTTACCACACTGGTTTGTAATGCGGCCGTGAAC
CCGCATTTTGGCTCGATGCTGGATATTCCTGATGACGCCTTTGAGCGGAT
CATGCGGTCGAATATCCTGTCGAACCAGTGGCTATGCAATATGGTGTTGC
CACAGATGATTGCGCGCAAAGACGGTTCCATTATCATTATTTCGTCAATC
GGTGGTCACCATGGCAATTCAGTGATTGGGGGCTACTGCATTTCCAAAGC
AGCCGATATGCAGCTTGCCCGTAACATCGCCGTTGAATTTGGGGTGCATA
ATATTCGCGCCAATGCCATTGCGCCCGGCCTGGTCAAGACAGAATTTGCA
AAGGCGCTCTGGAGCGATCCGGAAATACTTGCGGATTCGGTGTCGGGTTC
CACCCTGAAGCGAATCGGTGCGCCAGACGAGATTGCAGGGGCCGCAGTAT
TTCTTGCCTCGGCGGCGGGGGCATTTGTTACAGGCCAGACCATAAATGTG
GATGGTGGGGCGACGGCATTTTAA
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